RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 IGHV4-61A0A0C4DH41 118 aa9.46□□□□□ -0.9
PTCH1-212ENST00000546744 DEFB1P60022 68 aa9.46□□□□□ -0.9
PTCH1-212ENST00000546744 SEC61GP60059 68 aa9.46□□□□□ -0.9
PTCH1-212ENST00000546744 KLK5Q9Y337 293 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-212ENST00000546744 IGHV4-38-2P0DP08 117 aa9.45□□□□□ -0.9
PTCH1-212ENST00000546744 SHISA2Q6UWI4 295 aa9.45□□□□□ -0.9
PTCH1-212ENST00000546744 SLPIP03973 132 aa9.45□□□□□ -0.9
PTCH1-212ENST00000546744 SNURFQ9Y675 71 aa9.45□□□□□ -0.9
PTCH1-212ENST00000546744 POM121L12Q8N7R1 296 aa9.45□□□□□ -0.9
PTCH1-212ENST00000546744 CPAMD8Q8IZJ3 1885 aa9.44□□□□□ -0.9
PTCH1-212ENST00000546744 NAV3Q8IVL0 2385 aa9.44□□□□□ -0.9
PTCH1-212ENST00000546744 FASNP49327 2511 aaKnown RBP9.44□□□□□ -0.9
PTCH1-212ENST00000546744 ZFP36P26651 326 aaKnown RBP9.44□□□□□ -0.9
PTCH1-212ENST00000546744 CRIP2P52943 208 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-212ENST00000546744 Q8IZM0 81 aa9.44□□□□□ -0.9
PTCH1-212ENST00000546744 AMELXQ99217 191 aa9.44□□□□□ -0.9
PTCH1-212ENST00000546744 REG3AQ06141 175 aa9.43□□□□□ -0.9
PTCH1-212ENST00000546744 Q6ZQY7 126 aa9.43□□□□□ -0.9
PTCH1-212ENST00000546744 ZNF292O60281 2723 aa9.43□□□□□ -0.9
PTCH1-212ENST00000546744 C2CD3Q4AC94 2353 aa9.43□□□□□ -0.9
PTCH1-212ENST00000546744 CCDC168Q8NDH2 2452 aa9.43□□□□□ -0.9
PTCH1-212ENST00000546744 GAS8-AS1O95177 125 aa9.42□□□□□ -0.9
PTCH1-212ENST00000546744 DHRS4-AS1Q9P1J3 65 aa9.42□□□□□ -0.9
PTCH1-212ENST00000546744 A6NED7 52 aa9.42□□□□□ -0.9
PTCH1-212ENST00000546744 CD164L2Q6UWJ8 174 aa9.42□□□□□ -0.9
PTCH1-212ENST00000546744 CHCHD10Q8WYQ3 142 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-212ENST00000546744 PPDPFQ9H3Y8 114 aa9.42□□□□□ -0.9
PTCH1-212ENST00000546744 Q8NA96 180 aa9.42□□□□□ -0.9
PTCH1-212ENST00000546744 PRB1P04280 392 aa9.42□□□□□ -0.9
PTCH1-212ENST00000546744 DEFB136Q30KP8 78 aa9.42□□□□□ -0.9
PTCH1-212ENST00000546744 KLK12Q9UKR0 248 aa9.41□□□□□ -0.9
PTCH1-212ENST00000546744 CCL18P55774 89 aa9.41□□□□□ -0.9
PTCH1-212ENST00000546744 Q6ZTI0 123 aa9.41□□□□□ -0.9
PTCH1-212ENST00000546744 CSPG4Q6UVK1 2322 aa9.41□□□□□ -0.9
PTCH1-212ENST00000546744 PCSK5Q92824 1860 aa9.41□□□□□ -0.9
PTCH1-212ENST00000546744 AGRNO00468 2067 aa9.4□□□□□ -0.9
PTCH1-212ENST00000546744 PRYO14603 147 aa9.4□□□□□ -0.9
PTCH1-212ENST00000546744 LMO4P61968 165 aa9.4□□□□□ -0.9
PTCH1-212ENST00000546744 PRR9Q5T870 116 aa9.4□□□□□ -0.9
PTCH1-212ENST00000546744 M0R378 163 aa9.4□□□□□ -0.91
PTCH1-212ENST00000546744 BRI3O95415 125 aa9.4□□□□□ -0.91
PTCH1-212ENST00000546744 PTPRBP23467 1997 aa9.4□□□□□ -0.91
PTCH1-212ENST00000546744 WDFY4Q6ZS81 3184 aa9.4□□□□□ -0.91
PTCH1-212ENST00000546744 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
PTCH1-212ENST00000546744 LINC00242Q5T6M2 205 aa9.39□□□□□ -0.91
PTCH1-212ENST00000546744 CDC42SE2Q9NRR3 84 aa9.39□□□□□ -0.91
PTCH1-212ENST00000546744 SMIM1B2RUZ4 78 aa9.38□□□□□ -0.91
PTCH1-212ENST00000546744 PMAIP1Q13794 54 aa9.38□□□□□ -0.91
PTCH1-212ENST00000546744 FRYLO94915 3013 aa9.38□□□□□ -0.91
PTCH1-212ENST00000546744 H0Y9J4 135 aa9.38□□□□□ -0.91
PTCH1-212ENST00000546744 SCXQ7RTU7 201 aa9.38□□□□□ -0.91
PTCH1-212ENST00000546744 Q8N814 137 aa9.38□□□□□ -0.91
PTCH1-212ENST00000546744 ZNF462Q96JM2 2506 aa9.38□□□□□ -0.91
PTCH1-212ENST00000546744 CLPSL1A2RUU4 121 aa9.38□□□□□ -0.91
PTCH1-212ENST00000546744 LINC00269Q8N2A0 174 aa9.38□□□□□ -0.91
PTCH1-212ENST00000546744 ARHGAP32A7KAX9 2087 aa9.37□□□□□ -0.91
PTCH1-212ENST00000546744 CXCL6P80162 114 aa9.37□□□□□ -0.91
PTCH1-212ENST00000546744 Q96MF0 132 aa9.37□□□□□ -0.91
PTCH1-212ENST00000546744 SMCPP49901 116 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-212ENST00000546744 K7ERS5 55 aa9.36□□□□□ -0.91
PTCH1-212ENST00000546744 PRB2P02812 416 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-212ENST00000546744 DEFB114Q30KQ6 69 aa9.36□□□□□ -0.91
PTCH1-212ENST00000546744 B9D2Q9BPU9 175 aa9.36□□□□□ -0.91
PTCH1-212ENST00000546744 IGHV4-30-2A0A087WSY4 118 aa9.35□□□□□ -0.91
PTCH1-212ENST00000546744 GRNP28799 593 aaKnown RBP9.35□□□□□ -0.91
PTCH1-212ENST00000546744 LINC01561Q8N1V8 128 aa9.35□□□□□ -0.91
PTCH1-212ENST00000546744 A8MZ25 164 aa9.35□□□□□ -0.91
PTCH1-212ENST00000546744 C14orf177Q52M58 125 aa9.35□□□□□ -0.91
PTCH1-212ENST00000546744 ESRGQ1W209 222 aa9.35□□□□□ -0.91
PTCH1-212ENST00000546744 LINC00959A0A1B0GUT2 108 aa9.35□□□□□ -0.91
PTCH1-212ENST00000546744 Q8N3U1 123 aa9.35□□□□□ -0.91
PTCH1-212ENST00000546744 A0A087WVE0 104 aa9.34□□□□□ -0.91
PTCH1-212ENST00000546744 TMEM254Q8TBM7 123 aa9.34□□□□□ -0.91
PTCH1-212ENST00000546744 IGKV4-1P06312 121 aa9.34□□□□□ -0.91
PTCH1-212ENST00000546744 DCANP1Q8TF63 244 aa9.34□□□□□ -0.91
PTCH1-212ENST00000546744 A0A087WZ39 114 aa9.34□□□□□ -0.91
PTCH1-212ENST00000546744 LINC01548A6NM66 108 aa9.33□□□□□ -0.92
PTCH1-212ENST00000546744 ZNF73O43830 326 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-212ENST00000546744 Q8N9L7 120 aa9.33□□□□□ -0.92
PTCH1-212ENST00000546744 KIR2DL5BQ8NHK3 375 aa9.33□□□□□ -0.92
PTCH1-212ENST00000546744 COL27A1Q8IZC6 1860 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-212ENST00000546744 ZNF580Q9UK33 172 aa9.32□□□□□ -0.92
PTCH1-212ENST00000546744 SPEGQ15772 3267 aa9.32□□□□□ -0.92
PTCH1-212ENST00000546744 ADAMTSL4-AS1Q5T5F5 129 aa9.32□□□□□ -0.92
PTCH1-212ENST00000546744 LINC00846Q9NV44 126 aa9.32□□□□□ -0.92
PTCH1-212ENST00000546744 TRBV7-6A0A0J9YX20 115 aa9.31□□□□□ -0.92
PTCH1-212ENST00000546744 ADORA2A-AS1P86434 159 aa9.31□□□□□ -0.92
PTCH1-212ENST00000546744 C1orf158Q8N1D5 194 aa9.31□□□□□ -0.92
PTCH1-212ENST00000546744 A0A1B0GW54 56 aa9.31□□□□□ -0.92
PTCH1-212ENST00000546744 IGLV1-40P01703 118 aa9.3□□□□□ -0.92
PTCH1-212ENST00000546744 CHCHD7Q9BUK0 85 aa9.3□□□□□ -0.92
PTCH1-212ENST00000546744 DEFB121Q5J5C9 76 aa9.3□□□□□ -0.92
PTCH1-212ENST00000546744 SORL1Q92673 2214 aa9.3□□□□□ -0.92
PTCH1-212ENST00000546744 SYCNQ0VAF6 134 aa9.28□□□□□ -0.92
PTCH1-212ENST00000546744 ZFYVE26Q68DK2 2539 aa9.28□□□□□ -0.92
PTCH1-212ENST00000546744 PROK1P58294 105 aa9.28□□□□□ -0.92
PTCH1-212ENST00000546744 LIMD2Q9BT23 127 aa9.28□□□□□ -0.92
PTCH1-212ENST00000546744 PRRC2AP48634 2157 aaKnown RBP9.28□□□□□ -0.92
PTCH1-212ENST00000546744 ABCA2Q9BZC7 2435 aa9.28□□□□□ -0.92
PTCH1-212ENST00000546744 C3orf84H3BNL1 204 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms