RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 CEP295Q9C0D2 2601 aa8.87□□□□□ -0.99
NPC1L1-204ENST00000546276 BRK1Q8WUW1 75 aa8.87□□□□□ -0.99
NPC1L1-204ENST00000546276 PKIGQ9Y2B9 76 aa8.87□□□□□ -0.99
NPC1L1-204ENST00000546276 RAI1Q7Z5J4 1906 aaPredicted RBP8.86□□□□□ -0.99
NPC1L1-204ENST00000546276 RPL28P46779 137 aaKnown RBP8.86□□□□□ -0.99
NPC1L1-204ENST00000546276 BBC3Q96PG8 261 aaPredicted RBP8.86□□□□□ -0.99
NPC1L1-204ENST00000546276 Q6ZQY7 126 aa8.85□□□□□ -0.99
NPC1L1-204ENST00000546276 SONP18583 2426 aaKnown RBP8.85□□□□□ -0.99
NPC1L1-204ENST00000546276 MYO18BQ8IUG5 2567 aa8.85□□□□□ -0.99
NPC1L1-204ENST00000546276 AVPP01185 164 aa8.85□□□□□ -0.99
NPC1L1-204ENST00000546276 COX6A2Q02221 97 aa8.85□□□□□ -0.99
NPC1L1-204ENST00000546276 DNAH12Q6ZR08 3092 aa8.85□□□□□ -0.99
NPC1L1-204ENST00000546276 KIF25-AS1Q9Y6Z4 181 aa8.84□□□□□ -0.99
NPC1L1-204ENST00000546276 Q8IZM0 81 aa8.84□□□□□ -0.99
NPC1L1-204ENST00000546276 LINC00694P0DN24 101 aa8.84□□□□□ -0.99
NPC1L1-204ENST00000546276 AGRNO00468 2067 aa8.83□□□□□ -1
NPC1L1-204ENST00000546276 COX17Q14061 63 aa8.83□□□□□ -1
NPC1L1-204ENST00000546276 LINC00526Q96FQ7 95 aa8.83□□□□□ -1
NPC1L1-204ENST00000546276 WFDC10AQ9H1F0 79 aa8.83□□□□□ -1
NPC1L1-204ENST00000546276 CCDC168Q8NDH2 2452 aa8.83□□□□□ -1
NPC1L1-204ENST00000546276 CCKP06307 115 aa8.83□□□□□ -1
NPC1L1-204ENST00000546276 NDUFC1O43677 76 aa8.82□□□□□ -1
NPC1L1-204ENST00000546276 ODF3L2Q3SX64 289 aa8.82□□□□□ -1
NPC1L1-204ENST00000546276 HIVEP3Q5T1R4 2406 aa8.82□□□□□ -1
NPC1L1-204ENST00000546276 NDUFC2-KCTD14E9PQ53 114 aa8.82□□□□□ -1
NPC1L1-204ENST00000546276 CSDC2Q9Y534 153 aaKnown RBP8.82□□□□□ -1
NPC1L1-204ENST00000546276 UBE2AP49459 152 aa8.82□□□□□ -1
NPC1L1-204ENST00000546276 PRO0461Q9UI25 63 aa8.81□□□□□ -1
NPC1L1-204ENST00000546276 A0A1W2PPR1 153 aa8.81□□□□□ -1
NPC1L1-204ENST00000546276 SMCPP49901 116 aaPredicted RBP8.81□□□□□ -1
NPC1L1-204ENST00000546276 LINC00482Q8N8I6 264 aa8.81□□□□□ -1
NPC1L1-204ENST00000546276 MIFP14174 115 aa8.8□□□□□ -1
NPC1L1-204ENST00000546276 ATP5EP56381 51 aaPredicted RBP8.8□□□□□ -1
NPC1L1-204ENST00000546276 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
NPC1L1-204ENST00000546276 CEP350Q5VT06 3117 aa8.8□□□□□ -1
NPC1L1-204ENST00000546276 SNURFQ9Y675 71 aa8.8□□□□□ -1
NPC1L1-204ENST00000546276 A0A087WYN8 130 aa8.8□□□□□ -1
NPC1L1-204ENST00000546276 A0A087WZ39 114 aa8.79□□□□□ -1
NPC1L1-204ENST00000546276 MUC7Q8TAX7 377 aa8.79□□□□□ -1
NPC1L1-204ENST00000546276 SPTBN4Q9H254 2564 aa8.79□□□□□ -1
NPC1L1-204ENST00000546276 BEAN1Q3B7T3 259 aa8.79□□□□□ -1
NPC1L1-204ENST00000546276 Q6ZSN1 163 aa8.79□□□□□ -1
NPC1L1-204ENST00000546276 LINC00315P59091 139 aa8.78□□□□□ -1
NPC1L1-204ENST00000546276 LINC01006Q8NI28 216 aa8.78□□□□□ -1
NPC1L1-204ENST00000546276 ANKRD11Q6UB99 2663 aaPredicted RBP8.78□□□□□ -1
NPC1L1-204ENST00000546276 A0A087WVE0 104 aa8.78□□□□□ -1
NPC1L1-204ENST00000546276 NTM-AS1Q6ZSK4 140 aa8.78□□□□□ -1
NPC1L1-204ENST00000546276 M0R378 163 aa8.78□□□□□ -1
NPC1L1-204ENST00000546276 C1orf158Q8N1D5 194 aa8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 Q8N814 137 aa8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 C3orf84H3BNL1 204 aa8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 SYCNQ0VAF6 134 aa8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 LELP1Q5T871 98 aa8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 C11orf45Q8TAV5 145 aa8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 H0Y9J4 135 aa8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 ZNF73O43830 326 aaPredicted RBP8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 FAM19A3Q7Z5A8 133 aa8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 HIGD2AQ9BW72 106 aa8.77□□□□□ -1.01
NPC1L1-204ENST00000546276 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
NPC1L1-204ENST00000546276 TRBV7-7A0A0K0K1E9 115 aa8.76□□□□□ -1.01
NPC1L1-204ENST00000546276 COL4A2P08572 1712 aa8.75□□□□□ -1.01
NPC1L1-204ENST00000546276 FAM19A4Q96LR4 140 aa8.75□□□□□ -1.01
NPC1L1-204ENST00000546276 KLK5Q9Y337 293 aaPredicted RBP8.75□□□□□ -1.01
NPC1L1-204ENST00000546276 PRRC2AP48634 2157 aaKnown RBP8.75□□□□□ -1.01
NPC1L1-204ENST00000546276 IGKV2-24A0A0C4DH68 120 aa8.75□□□□□ -1.01
NPC1L1-204ENST00000546276 TRAV7A0A075B6U4 112 aa8.74□□□□□ -1.01
NPC1L1-204ENST00000546276 CYSRT1A8MQ03 144 aa8.74□□□□□ -1.01
NPC1L1-204ENST00000546276 CHKB-CPT1BH3BT56 60 aa8.74□□□□□ -1.01
NPC1L1-204ENST00000546276 DEFB131BA0A096LNP1 70 aa8.73□□□□□ -1.01
NPC1L1-204ENST00000546276 ABCA2Q9BZC7 2435 aa8.73□□□□□ -1.01
NPC1L1-204ENST00000546276 IGKV2-28A0A075B6P5 120 aa8.73□□□□□ -1.01
NPC1L1-204ENST00000546276 IGKV2D-28P01615 120 aa8.73□□□□□ -1.01
NPC1L1-204ENST00000546276 B9D2Q9BPU9 175 aa8.73□□□□□ -1.01
NPC1L1-204ENST00000546276 UNQ6190/PRO20217Q6UXQ8 127 aa8.72□□□□□ -1.01
NPC1L1-204ENST00000546276 PRR3P79522 188 aaKnown RBP8.72□□□□□ -1.01
NPC1L1-204ENST00000546276 FAM19A1Q7Z5A9 133 aa8.72□□□□□ -1.01
NPC1L1-204ENST00000546276 KIR2DL5BQ8NHK3 375 aa8.72□□□□□ -1.01
NPC1L1-204ENST00000546276 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
NPC1L1-204ENST00000546276 CHD8Q9HCK8 2581 aa8.72□□□□□ -1.01
NPC1L1-204ENST00000546276 IGLV5-39A0A0G2JS06 123 aa8.72□□□□□ -1.01
NPC1L1-204ENST00000546276 FHL2Q14192 279 aa8.71□□□□□ -1.01
NPC1L1-204ENST00000546276 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.01
NPC1L1-204ENST00000546276 SBSPONQ8IVN8 264 aa8.71□□□□□ -1.01
NPC1L1-204ENST00000546276 FAM19A5Q7Z5A7 132 aaPredicted RBP8.71□□□□□ -1.02
NPC1L1-204ENST00000546276 LINC00337Q8N6G1 96 aa8.7□□□□□ -1.02
NPC1L1-204ENST00000546276 PTPRBP23467 1997 aa8.7□□□□□ -1.02
NPC1L1-204ENST00000546276 SMIM26A0A096LP01 95 aa8.7□□□□□ -1.02
NPC1L1-204ENST00000546276 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
NPC1L1-204ENST00000546276 LINC00846Q9NV44 126 aa8.7□□□□□ -1.02
NPC1L1-204ENST00000546276 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
NPC1L1-204ENST00000546276 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
NPC1L1-204ENST00000546276 KPRPQ5T749 579 aaPredicted RBP8.69□□□□□ -1.02
NPC1L1-204ENST00000546276 HRCT1Q6UXD1 115 aa8.69□□□□□ -1.02
NPC1L1-204ENST00000546276 TRBV10-3A0A0K0K1G6 114 aa8.69□□□□□ -1.02
NPC1L1-204ENST00000546276 IGLV1-51P01701 117 aa8.69□□□□□ -1.02
NPC1L1-204ENST00000546276 USP9XQ93008 2570 aaPredicted RBP8.69□□□□□ -1.02
NPC1L1-204ENST00000546276 WFDC10BQ8IUB3 73 aa8.68□□□□□ -1.02
NPC1L1-204ENST00000546276 C11orf72Q8NBR9 251 aa8.68□□□□□ -1.02
NPC1L1-204ENST00000546276 HILS1P60008 231 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms