RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PATE2Q6UY27 113 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 COX7B2Q8TF08 81 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 PRO1854Q9UHT4 67 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 IGHV4-28A0A0C4DH34 117 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 UBE2D1P51668 147 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 LINC00269Q8N2A0 174 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 CARD19Q96LW7 228 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 SND1-IT1Q9HBX3 110 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 GCN1Q92616 2671 aaKnown RBP6.43□□□□□ -1.38
CLIP1-218ENST00000545889 IGHV4-30-4P0DP06 118 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 C9orf85Q96MD7 179 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 CRYGBP07316 175 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 NHLRC4P0CG21 123 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-218ENST00000545889 REG3AQ06141 175 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 KPRPQ5T749 579 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-218ENST00000545889 MSRB1Q9NZV6 116 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 A0A0U1RQV1 116 aa6.42□□□□□ -1.38
CLIP1-218ENST00000545889 OPRPNQ99935 248 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-218ENST00000545889 TINCRA0A1B0GVN0 87 aa6.42□□□□□ -1.38
CLIP1-218ENST00000545889 FHL3Q13643 280 aa6.42□□□□□ -1.38
CLIP1-218ENST00000545889 EBI3Q14213 229 aa6.42□□□□□ -1.38
CLIP1-218ENST00000545889 LECT2O14960 151 aa6.42□□□□□ -1.38
CLIP1-218ENST00000545889 U3KQK5 164 aa6.41□□□□□ -1.38
CLIP1-218ENST00000545889 A0A0J9YWU9 116 aa6.41□□□□□ -1.38
CLIP1-218ENST00000545889 BAHCC1Q9P281 2608 aa6.41□□□□□ -1.38
CLIP1-218ENST00000545889 Q8N6K4 173 aa6.4□□□□□ -1.38
CLIP1-218ENST00000545889 WFDC10AQ9H1F0 79 aa6.4□□□□□ -1.38
CLIP1-218ENST00000545889 SMCPP49901 116 aaPredicted RBP6.4□□□□□ -1.38
CLIP1-218ENST00000545889 NANOS2P60321 138 aaKnown RBP6.4□□□□□ -1.38
CLIP1-218ENST00000545889 C3orf22Q8N5N4 141 aa6.4□□□□□ -1.38
CLIP1-218ENST00000545889 ITPR2Q14571 2701 aa6.4□□□□□ -1.39
CLIP1-218ENST00000545889 PRO0461Q9UI25 63 aa6.4□□□□□ -1.39
CLIP1-218ENST00000545889 UBE2D4Q9Y2X8 147 aa6.4□□□□□ -1.39
CLIP1-218ENST00000545889 UQCRQO14949 82 aa6.39□□□□□ -1.39
CLIP1-218ENST00000545889 PSMB8P28062 276 aa6.39□□□□□ -1.39
CLIP1-218ENST00000545889 TET2Q6N021 2002 aaPredicted RBP6.39□□□□□ -1.39
CLIP1-218ENST00000545889 IGKV1D-37A0A075B6S9 117 aa6.39□□□□□ -1.39
CLIP1-218ENST00000545889 TRBV6-1A0A0K0K1D8 114 aa6.39□□□□□ -1.39
CLIP1-218ENST00000545889 FAM19A1Q7Z5A9 133 aa6.39□□□□□ -1.39
CLIP1-218ENST00000545889 LINC01620Q4KN68 170 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 DIRC1Q969H9 104 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 ORMDL1Q9P0S3 153 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 TACC2O95359 2948 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 NCR3O14931 201 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 MED14OSP0DP75 135 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 RPL39P62891 51 aaKnown RBP6.38□□□□□ -1.39
CLIP1-218ENST00000545889 SYCNQ0VAF6 134 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
CLIP1-218ENST00000545889 FAM167A-AS1Q96KT0 104 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 UTP20O75691 2785 aaKnown RBP6.38□□□□□ -1.39
CLIP1-218ENST00000545889 CFC1BP0CG36 223 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 CFC1P0CG37 223 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 V9GYY9 64 aa6.38□□□□□ -1.39
CLIP1-218ENST00000545889 IGHV1-58A0A0C4DH39 117 aa6.37□□□□□ -1.39
CLIP1-218ENST00000545889 C18orf65Q6ZTR6 163 aa6.37□□□□□ -1.39
CLIP1-218ENST00000545889 ZFHX4Q86UP3 3567 aa6.37□□□□□ -1.39
CLIP1-218ENST00000545889 MRPS12O15235 138 aaKnown RBP6.37□□□□□ -1.39
CLIP1-218ENST00000545889 A0A1B0GX51 115 aa6.37□□□□□ -1.39
CLIP1-218ENST00000545889 C4orf26Q17RF5 130 aa6.37□□□□□ -1.39
CLIP1-218ENST00000545889 CRIP2P52943 208 aaPredicted RBP6.36□□□□□ -1.39
CLIP1-218ENST00000545889 BRK1Q8WUW1 75 aa6.36□□□□□ -1.39
CLIP1-218ENST00000545889 ODF3Q96PU9 254 aa6.36□□□□□ -1.39
CLIP1-218ENST00000545889 STAB1Q9NY15 2570 aa6.36□□□□□ -1.39
CLIP1-218ENST00000545889 H0YGX0 51 aa6.36□□□□□ -1.39
CLIP1-218ENST00000545889 CRYBG3Q68DQ2 2970 aa6.36□□□□□ -1.39
CLIP1-218ENST00000545889 H0Y9J4 135 aa6.36□□□□□ -1.39
CLIP1-218ENST00000545889 MIAQ16674 131 aa6.36□□□□□ -1.39
CLIP1-218ENST00000545889 C19orf71A6NCJ1 209 aa6.35□□□□□ -1.39
CLIP1-218ENST00000545889 A0A096LNJ9 63 aa6.35□□□□□ -1.39
CLIP1-218ENST00000545889 NREPQ16612 68 aa6.35□□□□□ -1.39
CLIP1-218ENST00000545889 MIR7-3HGQ8N6C7 128 aa6.35□□□□□ -1.39
CLIP1-218ENST00000545889 C20orf203Q8NBC4 194 aa6.35□□□□□ -1.39
CLIP1-218ENST00000545889 RETNQ9HD89 108 aa6.35□□□□□ -1.39
CLIP1-218ENST00000545889 TEX15Q9BXT5 2789 aa6.35□□□□□ -1.39
CLIP1-218ENST00000545889 Q6Q795 121 aa6.34□□□□□ -1.39
CLIP1-218ENST00000545889 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.39
CLIP1-218ENST00000545889 SEC61GP60059 68 aa6.34□□□□□ -1.39
CLIP1-218ENST00000545889 ZFAND2AQ8N6M9 145 aa6.34□□□□□ -1.39
CLIP1-218ENST00000545889 CHKB-CPT1BH3BT56 60 aa6.34□□□□□ -1.39
CLIP1-218ENST00000545889 DAND5Q8N907 189 aa6.34□□□□□ -1.39
CLIP1-218ENST00000545889 XAGE1AQ9HD64 81 aa6.33□□□□□ -1.4
CLIP1-218ENST00000545889 BAALC-AS2P0C853 105 aa6.33□□□□□ -1.4
CLIP1-218ENST00000545889 UBE2D3P61077 147 aa6.33□□□□□ -1.4
CLIP1-218ENST00000545889 MRGPRG-AS1Q2M3A8 158 aa6.33□□□□□ -1.4
CLIP1-218ENST00000545889 CEMP1Q6PRD7 247 aaPredicted RBP6.33□□□□□ -1.4
CLIP1-218ENST00000545889 TRBV6-8A0A0A6YYG3 113 aa6.33□□□□□ -1.4
CLIP1-218ENST00000545889 TRBV10-2A0A0K0K1G8 114 aa6.33□□□□□ -1.4
CLIP1-218ENST00000545889 IGKV3D-7A0A0C4DH55 119 aa6.32□□□□□ -1.4
CLIP1-218ENST00000545889 COX7BP24311 80 aa6.32□□□□□ -1.4
CLIP1-218ENST00000545889 MLST8Q9BVC4 326 aa6.32□□□□□ -1.4
CLIP1-218ENST00000545889 ZNF22P17026 224 aaPredicted RBP6.32□□□□□ -1.4
CLIP1-218ENST00000545889 CLEC2BQ92478 149 aa6.32□□□□□ -1.4
CLIP1-218ENST00000545889 C1orf134Q5TEV5 83 aa6.32□□□□□ -1.4
CLIP1-218ENST00000545889 LELP1Q5T871 98 aa6.32□□□□□ -1.4
CLIP1-218ENST00000545889 ATOX1O00244 68 aa6.31□□□□□ -1.4
CLIP1-218ENST00000545889 GAS8-AS1O95177 125 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 SPANXCQ9NY87 97 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 H3BQ85 93 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 COX7CP15954 63 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 MP68P56378 58 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms