RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	UBE2L5P	A0A1B0GUS4	154 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	C17orf112	F2Z3M2	114 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585		H0Y9J4	135 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	SNAI2	O43623	268 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	OR7C2	O60412	319 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	IFNA1	P01562	189 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585		P01737	135 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	CRP	P02741	224 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	SRP19	P09132	144 aa	Known RBP	3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	LINC00694	P0DN24	101 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	TAS2R45	P59539	299 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	KRTAP10-8	P60410	259 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	SERF2	P84101	59 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	CIRBP	Q14011	172 aa	Known RBP	3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	ENHO	Q6UWT2	76 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	PCP2	Q8IVA1	136 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	ZFP82	Q8N141	532 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	MBD3L1	Q8WWY6	194 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	TVP23C	Q96ET8	276 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	C14orf144	Q96I85	54 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	DNAJC30	Q96LL9	226 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	YPEL4	Q96NS1	127 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	NDFIP1	Q9BT67	221 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	SAMD10	Q9BYL1	202 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	KRTAP2-2	Q9BYT5	123 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	KCNIP2	Q9NS61	270 aa		3.77	□□□□□ -1.81
CPSF7-222	ENST00000544585	FAM240A	A0A1B0GVK7	77 aa		3.76	□□□□□ -1.81
CPSF7-222	ENST00000544585	S100A4	P26447	101 aa	Known RBP	3.76	□□□□□ -1.81
CPSF7-222	ENST00000544585	AKR1C3	P42330	323 aa		3.76	□□□□□ -1.81
CPSF7-222	ENST00000544585	RPS10	P46783	165 aa	Known RBP	3.76	□□□□□ -1.81
CPSF7-222	ENST00000544585	PKIA	P61925	76 aa		3.76	□□□□□ -1.81
CPSF7-222	ENST00000544585	RPL23	P62829	140 aa	Known RBP	3.76	□□□□□ -1.81
CPSF7-222	ENST00000544585	MIA	Q16674	131 aa		3.76	□□□□□ -1.81
CPSF7-222	ENST00000544585	TMEM242	Q9NWH2	141 aa		3.76	□□□□□ -1.81
CPSF7-222	ENST00000544585	PKHD1L1	Q86WI1	4243 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	IGLV1-50	A0A075B6I6	118 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	TRBV10-1	A0A0K0K1A3	114 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	PANO1	I0J062	215 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	LINC00614	P0C842	121 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	BCL2	P10415	239 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	RNASE3	P12724	160 aa	Known RBP	3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	CNBP	P62633	177 aa	Known RBP	3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	UBE2L3	P68036	154 aa	Known RBP	3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	CCL20	P78556	96 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	FABP9	Q0Z7S8	132 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	SPINK6	Q6UWN8	80 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	GOLT1A	Q6ZVE7	132 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	CAMK2N2	Q96S95	79 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	GNG13	Q9P2W3	67 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	VAX2	Q9UIW0	290 aa		3.75	□□□□□ -1.81
CPSF7-222	ENST00000544585	TRBV7-3	A0A075B6L6	115 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	IGHV3-64	A0A075B6Q5	118 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	TRBV6-8	A0A0A6YYG3	113 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585		A0A0U1RQV1	116 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585		A0A1B0GV50	99 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585		F6UZH7	168 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	ZNF861P	O60384	105 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	HLA-DQA1	P01909	254 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	ANG	P03950	147 aa	Known RBP	3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	S100A2	P29034	98 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	DNLZ	Q5SXM8	178 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	TMEM243	Q9BU79	118 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	WDR61	Q9GZS3	305 aa	Known RBP	3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	PLAC8	Q9NZF1	115 aa		3.74	□□□□□ -1.81
CPSF7-222	ENST00000544585	TRBV24-1	A0A075B6N3	115 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	CTXND1	A0A1B0GTU2	59 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	MAP1LC3B2	A6NCE7	125 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	FABP5P3	A8MUU1	101 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	ZNF727	A8MUV8	499 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	TMEM250	H0YL14	139 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	GZMB	P10144	247 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	ZNF80	P51504	273 aa	Predicted RBP	3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	CEBPG	P53567	150 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	UBE2D3	P61077	147 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	UBE2D2	P62837	147 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	TMEM97	Q5BJF2	176 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	BTF3L4	Q96K17	158 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	MAP1LC3B	Q9GZQ8	125 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	MANBAL	Q9NQG1	85 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	IL36B	Q9NZH7	164 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	NAT8	Q9UHE5	227 aa		3.73	□□□□□ -1.81
CPSF7-222	ENST00000544585	TNXB	P22105	4242 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	NDUFC2-KCTD14	E9PQ53	114 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	TCRA	P04437	139 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	CXCL1	P09341	107 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	NDUFA6	P56556	154 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	RBX1	P62877	108 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	MEF2B	Q02080	365 aa	Predicted RBP	3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	TMEM241	Q24JQ0	296 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	C5orf47	Q569G3	176 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	SPACA4	Q8TDM5	124 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	FAM104A	Q969W3	186 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	SFRP2	Q96HF1	295 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	RPP21	Q9H633	154 aa	Known RBP	3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	PRR34	Q9NV39	138 aa		3.72	□□□□□ -1.81
CPSF7-222	ENST00000544585	TGIF2-C20orf24	A0A0A6YYL0	155 aa		3.71	□□□□□ -1.82
CPSF7-222	ENST00000544585	PSPHP1	O15172	72 aa		3.71	□□□□□ -1.82
CPSF7-222	ENST00000544585	PDE6D	O43924	150 aa		3.71	□□□□□ -1.82
CPSF7-222	ENST00000544585	HIST1H2BK	O60814	126 aa		3.71	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms