RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 UBE2D2P62837 147 aa10.16□□□□□ -0.78
RPS6KC1-206ENST00000543354 NREPQ16612 68 aa10.16□□□□□ -0.78
RPS6KC1-206ENST00000543354 XAGE1AQ9HD64 81 aa10.16□□□□□ -0.78
RPS6KC1-206ENST00000543354 MGAM2Q2M2H8 2515 aa10.15□□□□□ -0.78
RPS6KC1-206ENST00000543354 UBE2DNLQ8IWF7 75 aa10.15□□□□□ -0.78
RPS6KC1-206ENST00000543354 RAI1Q7Z5J4 1906 aaPredicted RBP10.15□□□□□ -0.78
RPS6KC1-206ENST00000543354 DEFB114Q30KQ6 69 aa10.15□□□□□ -0.78
RPS6KC1-206ENST00000543354 ASPMQ8IZT6 3477 aa10.15□□□□□ -0.79
RPS6KC1-206ENST00000543354 TMEM256-PLSCR3K7ERE1 68 aa10.15□□□□□ -0.79
RPS6KC1-206ENST00000543354 WFDC9Q8NEX5 89 aa10.15□□□□□ -0.79
RPS6KC1-206ENST00000543354 A0A1W2PPR1 153 aa10.14□□□□□ -0.79
RPS6KC1-206ENST00000543354 APOC4P55056 127 aa10.14□□□□□ -0.79
RPS6KC1-206ENST00000543354 C3orf22Q8N5N4 141 aa10.14□□□□□ -0.79
RPS6KC1-206ENST00000543354 MAST4O15021 2626 aa10.14□□□□□ -0.79
RPS6KC1-206ENST00000543354 C6orf99Q4VX62 202 aa10.14□□□□□ -0.79
RPS6KC1-206ENST00000543354 UPK3BQ9BT76 320 aa10.14□□□□□ -0.79
RPS6KC1-206ENST00000543354 UBE2BP63146 152 aa10.14□□□□□ -0.79
RPS6KC1-206ENST00000543354 UBE2D4Q9Y2X8 147 aa10.14□□□□□ -0.79
RPS6KC1-206ENST00000543354 PYGO1Q9Y3Y4 419 aa10.14□□□□□ -0.79
RPS6KC1-206ENST00000543354 AVPP01185 164 aa10.13□□□□□ -0.79
RPS6KC1-206ENST00000543354 DEFB113Q30KQ7 82 aa10.13□□□□□ -0.79
RPS6KC1-206ENST00000543354 HIGD2BQ4VC39 106 aa10.13□□□□□ -0.79
RPS6KC1-206ENST00000543354 C9orf85Q96MD7 179 aa10.13□□□□□ -0.79
RPS6KC1-206ENST00000543354 PRO3102Q9H379 93 aa10.13□□□□□ -0.79
RPS6KC1-206ENST00000543354 ODF3Q96PU9 254 aa10.12□□□□□ -0.79
RPS6KC1-206ENST00000543354 PSMG3-AS1Q96PY0 264 aa10.12□□□□□ -0.79
RPS6KC1-206ENST00000543354 CDIP1Q9H305 208 aa10.12□□□□□ -0.79
RPS6KC1-206ENST00000543354 LOC400499M0QZD8 3231 aa10.12□□□□□ -0.79
RPS6KC1-206ENST00000543354 A0A087WVE0 104 aa10.12□□□□□ -0.79
RPS6KC1-206ENST00000543354 PRO0255Q9UI72 69 aa10.12□□□□□ -0.79
RPS6KC1-206ENST00000543354 USP17L23D6RBM5 183 aa10.12□□□□□ -0.79
RPS6KC1-206ENST00000543354 TMEM258P61165 79 aa10.12□□□□□ -0.79
RPS6KC1-206ENST00000543354 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
RPS6KC1-206ENST00000543354 FUSP35637 526 aaKnown RBP eCLIP10.11□□□□□ -0.79
RPS6KC1-206ENST00000543354 C5orf47Q569G3 176 aa10.11□□□□□ -0.79
RPS6KC1-206ENST00000543354 SMIM11BQ8TCY0 68 aa10.1□□□□□ -0.79
RPS6KC1-206ENST00000543354 KLK5Q9Y337 293 aaPredicted RBP10.1□□□□□ -0.79
RPS6KC1-206ENST00000543354 ETDCA0A1B0GVM5 59 aa10.1□□□□□ -0.79
RPS6KC1-206ENST00000543354 DIRC1Q969H9 104 aa10.1□□□□□ -0.79
RPS6KC1-206ENST00000543354 CFAP47Q6ZTR5 3102 aa10.1□□□□□ -0.79
RPS6KC1-206ENST00000543354 CHD6Q8TD26 2715 aa10.1□□□□□ -0.79
RPS6KC1-206ENST00000543354 SMCPP49901 116 aaPredicted RBP10.1□□□□□ -0.79
RPS6KC1-206ENST00000543354 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
RPS6KC1-206ENST00000543354 SPART-AS1P0CW21 52 aa10.09□□□□□ -0.79
RPS6KC1-206ENST00000543354 FAM222AQ5U5X8 452 aa10.09□□□□□ -0.79
RPS6KC1-206ENST00000543354 BRK1Q8WUW1 75 aa10.09□□□□□ -0.79
RPS6KC1-206ENST00000543354 C4orf3Q8WVX3 66 aa10.09□□□□□ -0.79
RPS6KC1-206ENST00000543354 MPLKIPQ8TAP9 179 aa10.09□□□□□ -0.79
RPS6KC1-206ENST00000543354 TMEM89A2RUT3 159 aa10.08□□□□□ -0.8
RPS6KC1-206ENST00000543354 LINC00694P0DN24 101 aa10.08□□□□□ -0.8
RPS6KC1-206ENST00000543354 COX8CQ7Z4L0 72 aa10.08□□□□□ -0.8
RPS6KC1-206ENST00000543354 ZFHX4Q86UP3 3567 aa10.08□□□□□ -0.8
RPS6KC1-206ENST00000543354 CDK2AP2O75956 126 aa10.08□□□□□ -0.8
RPS6KC1-206ENST00000543354 TRBV6-8A0A0A6YYG3 113 aa10.08□□□□□ -0.8
RPS6KC1-206ENST00000543354 CHCHD10Q8WYQ3 142 aaPredicted RBP10.08□□□□□ -0.8
RPS6KC1-206ENST00000543354 SNURFQ9Y675 71 aa10.08□□□□□ -0.8
RPS6KC1-206ENST00000543354 KALRNO60229 2985 aa10.08□□□□□ -0.8
RPS6KC1-206ENST00000543354 COX6A2Q02221 97 aa10.07□□□□□ -0.8
RPS6KC1-206ENST00000543354 DMXL2Q8TDJ6 3036 aa10.07□□□□□ -0.8
RPS6KC1-206ENST00000543354 REG3AQ06141 175 aa10.07□□□□□ -0.8
RPS6KC1-206ENST00000543354 FAM110AQ9BQ89 295 aa10.07□□□□□ -0.8
RPS6KC1-206ENST00000543354 TACC2O95359 2948 aa10.07□□□□□ -0.8
RPS6KC1-206ENST00000543354 HECTD1Q9ULT8 2610 aa10.07□□□□□ -0.8
RPS6KC1-206ENST00000543354 LINC00482Q8N8I6 264 aa10.07□□□□□ -0.8
RPS6KC1-206ENST00000543354 IBA57-AS1B1ANH7 110 aa10.07□□□□□ -0.8
RPS6KC1-206ENST00000543354 CXCL5P42830 114 aa10.07□□□□□ -0.8
RPS6KC1-206ENST00000543354 CCL18P55774 89 aa10.06□□□□□ -0.8
RPS6KC1-206ENST00000543354 PRR3P79522 188 aaKnown RBP10.06□□□□□ -0.8
RPS6KC1-206ENST00000543354 DNAJC9-AS1A6NH13 148 aa10.06□□□□□ -0.8
RPS6KC1-206ENST00000543354 Q6ZQY7 126 aa10.06□□□□□ -0.8
RPS6KC1-206ENST00000543354 A0A0U1RQV1 116 aa10.05□□□□□ -0.8
RPS6KC1-206ENST00000543354 IGLV1-40P01703 118 aa10.05□□□□□ -0.8
RPS6KC1-206ENST00000543354 COX7CP15954 63 aa10.05□□□□□ -0.8
RPS6KC1-206ENST00000543354 PKIGQ9Y2B9 76 aa10.05□□□□□ -0.8
RPS6KC1-206ENST00000543354 Q6ZSN1 163 aa10.04□□□□□ -0.8
RPS6KC1-206ENST00000543354 SERP2Q8N6R1 65 aa10.04□□□□□ -0.8
RPS6KC1-206ENST00000543354 BBC3Q96PG8 261 aaPredicted RBP10.03□□□□□ -0.8
RPS6KC1-206ENST00000543354 ADGRG4Q8IZF6 3080 aa10.03□□□□□ -0.8
RPS6KC1-206ENST00000543354 M0QXV9 152 aa10.03□□□□□ -0.8
RPS6KC1-206ENST00000543354 TIMM17BO60830 172 aa10.03□□□□□ -0.8
RPS6KC1-206ENST00000543354 Q6YL49 198 aa10.03□□□□□ -0.8
RPS6KC1-206ENST00000543354 SMIM1B2RUZ4 78 aa10.03□□□□□ -0.8
RPS6KC1-206ENST00000543354 COX7BP24311 80 aa10.02□□□□□ -0.8
RPS6KC1-206ENST00000543354 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.8
RPS6KC1-206ENST00000543354 Q9UF83 564 aa10.02□□□□□ -0.8
RPS6KC1-206ENST00000543354 IMUPQ9GZP8 106 aa10.02□□□□□ -0.81
RPS6KC1-206ENST00000543354 PRO0461Q9UI25 63 aa10.02□□□□□ -0.81
RPS6KC1-206ENST00000543354 A0A096LNI7 61 aa10.02□□□□□ -0.81
RPS6KC1-206ENST00000543354 FAM236DA0A1B0GTK5 79 aa10.02□□□□□ -0.81
RPS6KC1-206ENST00000543354 FAM236CP0DP71 79 aa10.02□□□□□ -0.81
RPS6KC1-206ENST00000543354 DMDP11532 3685 aa10.01□□□□□ -0.81
RPS6KC1-206ENST00000543354 PCSK5Q92824 1860 aa10.01□□□□□ -0.81
RPS6KC1-206ENST00000543354 C3orf84H3BNL1 204 aa10.01□□□□□ -0.81
RPS6KC1-206ENST00000543354 BPY2O14599 106 aa10.01□□□□□ -0.81
RPS6KC1-206ENST00000543354 NDUFS5O43920 106 aa10.01□□□□□ -0.81
RPS6KC1-206ENST00000543354 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
RPS6KC1-206ENST00000543354 LOC107984640A0A0U1RRK4 108 aa10□□□□□ -0.81
RPS6KC1-206ENST00000543354 CHCHD7Q9BUK0 85 aa10□□□□□ -0.81
RPS6KC1-206ENST00000543354 ZNF702PQ9H963 129 aa10□□□□□ -0.81
RPS6KC1-206ENST00000543354 IGHV4-31P0DP07 118 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms