RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 SEC11AP67812 179 aa1.05□□□□□ -2.24
SRGAP1-204ENST00000542381 NXT2Q9NPJ8 142 aaKnown RBP1.05□□□□□ -2.24
SRGAP1-204ENST00000542381 FAIMQ9NVQ4 179 aa1.05□□□□□ -2.24
SRGAP1-204ENST00000542381 LINC01558Q9Y6Z2 57 aa1.05□□□□□ -2.24
SRGAP1-204ENST00000542381 SZT2Q5T011 3432 aa1.05□□□□□ -2.24
SRGAP1-204ENST00000542381 FYCO1Q9BQS8 1478 aa1.05□□□□□ -2.24
SRGAP1-204ENST00000542381 DIP2CQ9Y2E4 1556 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 ZNF815PA8K554 130 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 MT-ATP8P03928 68 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 COX6A2Q02221 97 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 SSBP3-AS1Q7Z2R9 100 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 PMCHL2Q9BQD1 86 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 PLAC8Q9NZF1 115 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 POLQO75417 2590 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 BDP1A6H8Y1 2624 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 TEX14Q8IWB6 1497 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 HMGXB3Q12766 1538 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 URB2Q14146 1524 aaKnown RBP1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 NHSL1Q5SYE7 1610 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 COL4A6Q14031 1691 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 CFAP43Q8NDM7 1665 aa1.04□□□□□ -2.24
SRGAP1-204ENST00000542381 COL6A3P12111 3177 aa1.03□□□□□ -2.24
SRGAP1-204ENST00000542381 PVALEFA0A1B0GWK0 134 aa1.03□□□□□ -2.24
SRGAP1-204ENST00000542381 COL5A1-AS1Q5SY13 56 aa1.03□□□□□ -2.24
SRGAP1-204ENST00000542381 KRTAP19-3Q7Z4W3 81 aa1.03□□□□□ -2.24
SRGAP1-204ENST00000542381 MED14O60244 1454 aa1.03□□□□□ -2.24
SRGAP1-204ENST00000542381 LRP6O75581 1613 aa1.03□□□□□ -2.24
SRGAP1-204ENST00000542381 CCDC180Q9P1Z9 1646 aa1.03□□□□□ -2.24
SRGAP1-204ENST00000542381 PREX1Q8TCU6 1659 aa1.03□□□□□ -2.24
SRGAP1-204ENST00000542381 MARF1Q9Y4F3 1742 aaKnown RBP1.03□□□□□ -2.24
SRGAP1-204ENST00000542381 EP400Q96L91 3159 aa1.02□□□□□ -2.25
SRGAP1-204ENST00000542381 M0R3E3 92 aa1.02□□□□□ -2.25
SRGAP1-204ENST00000542381 TRANK1O15050 2925 aa1.02□□□□□ -2.25
SRGAP1-204ENST00000542381 IGLC1P0CG04 106 aa1.02□□□□□ -2.25
SRGAP1-204ENST00000542381 CLTCQ00610 1675 aaKnown RBP1.02□□□□□ -2.25
SRGAP1-204ENST00000542381 NUP188Q5SRE5 1749 aa1.02□□□□□ -2.25
SRGAP1-204ENST00000542381 KCPQ6ZWJ8 1503 aa1.02□□□□□ -2.25
SRGAP1-204ENST00000542381 MAGI1Q96QZ7 1491 aaPredicted RBP1.02□□□□□ -2.25
SRGAP1-204ENST00000542381 GOLGB1Q14789 3259 aaKnown RBP1.02□□□□□ -2.25
SRGAP1-204ENST00000542381 ANKRD36A6QL64 1941 aa1.01□□□□□ -2.25
SRGAP1-204ENST00000542381 MEGF8Q7Z7M0 2845 aa1.01□□□□□ -2.25
SRGAP1-204ENST00000542381 ABCA12Q86UK0 2595 aa1.01□□□□□ -2.25
SRGAP1-204ENST00000542381 MGPP08493 103 aa1.01□□□□□ -2.25
SRGAP1-204ENST00000542381 SPTBN2O15020 2390 aa1.01□□□□□ -2.25
SRGAP1-204ENST00000542381 LRRIQ1Q96JM4 1722 aa1.01□□□□□ -2.25
SRGAP1-204ENST00000542381 FASNP49327 2511 aaKnown RBP1□□□□□ -2.25
SRGAP1-204ENST00000542381 KIAA0556O60303 1618 aa1□□□□□ -2.25
SRGAP1-204ENST00000542381 ADCY10Q96PN6 1610 aa1□□□□□ -2.25
SRGAP1-204ENST00000542381 EPRSP07814 1512 aaKnown RBP1□□□□□ -2.25
SRGAP1-204ENST00000542381 GOLGA4Q13439 2230 aaKnown RBP1□□□□□ -2.25
SRGAP1-204ENST00000542381 APCP25054 2843 aa1□□□□□ -2.25
SRGAP1-204ENST00000542381 ANKRD17O75179 2603 aaKnown RBP1□□□□□ -2.25
SRGAP1-204ENST00000542381 CHD8Q9HCK8 2581 aa1□□□□□ -2.25
SRGAP1-204ENST00000542381 Q6JHZ5 121 aa1□□□□□ -2.25
SRGAP1-204ENST00000542381 LINC00472Q9H8W2 130 aa1□□□□□ -2.25
SRGAP1-204ENST00000542381 SUPT6HQ7KZ85 1726 aaKnown RBP1□□□□□ -2.25
SRGAP1-204ENST00000542381 ABCC3O15438 1527 aa0.99□□□□□ -2.25
SRGAP1-204ENST00000542381 NAV2Q8IVL1 2488 aa0.99□□□□□ -2.25
SRGAP1-204ENST00000542381 FANCD2Q9BXW9 1451 aa0.99□□□□□ -2.25
SRGAP1-204ENST00000542381 DOPEY2Q9Y3R5 2298 aa0.99□□□□□ -2.25
SRGAP1-204ENST00000542381 FAM223BA6NKX1 122 aa0.99□□□□□ -2.25
SRGAP1-204ENST00000542381 C9orf62Q8N4C0 152 aa0.99□□□□□ -2.25
SRGAP1-204ENST00000542381 VCANP13611 3396 aa0.99□□□□□ -2.25
SRGAP1-204ENST00000542381 TPRP12270 2363 aaKnown RBP0.99□□□□□ -2.25
SRGAP1-204ENST00000542381 PRDM15P57071 1507 aaPredicted RBP0.99□□□□□ -2.25
SRGAP1-204ENST00000542381 DNAJC13O75165 2243 aa0.99□□□□□ -2.25
SRGAP1-204ENST00000542381 NSD3Q9BZ95 1437 aa0.98□□□□□ -2.25
SRGAP1-204ENST00000542381 ANKRD36BQ8N2N9 1353 aa0.98□□□□□ -2.25
SRGAP1-204ENST00000542381 C2CD3Q4AC94 2353 aa0.98□□□□□ -2.25
SRGAP1-204ENST00000542381 MAP3K4Q9Y6R4 1608 aa0.98□□□□□ -2.25
SRGAP1-204ENST00000542381 A0A0G2JND7 137 aa0.98□□□□□ -2.25
SRGAP1-204ENST00000542381 LINC00032P0C843 101 aa0.98□□□□□ -2.25
SRGAP1-204ENST00000542381 UBA52P62987 128 aaKnown RBP0.98□□□□□ -2.25
SRGAP1-204ENST00000542381 DPY30Q9C005 99 aa0.98□□□□□ -2.25
SRGAP1-204ENST00000542381 CUX1P39880 1505 aa0.98□□□□□ -2.25
SRGAP1-204ENST00000542381 PIEZO1Q92508 2521 aa0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 UNC80Q8N2C7 3258 aa0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 MYO3AQ8NEV4 1616 aa0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 GLI2P10070 1586 aa0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 PTPRZ1P23471 2315 aaPredicted RBP0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 USP9XQ93008 2570 aaPredicted RBP0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 V9GYS6 101 aa0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 ARHGEF12Q9NZN5 1544 aa0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 ZFHX3Q15911 3703 aa0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 PLEKHH2Q8IVE3 1493 aa0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 TEP1Q99973 2627 aaKnown RBP0.97□□□□□ -2.25
SRGAP1-204ENST00000542381 SETXQ7Z333 2677 aaKnown RBP0.96□□□□□ -2.26
SRGAP1-204ENST00000542381 CEP250Q9BV73 2442 aa0.96□□□□□ -2.26
SRGAP1-204ENST00000542381 S100A3P33764 101 aa0.96□□□□□ -2.26
SRGAP1-204ENST00000542381 ARHGAP35Q9NRY4 1499 aa0.96□□□□□ -2.26
SRGAP1-204ENST00000542381 MLH3Q9UHC1 1453 aa0.96□□□□□ -2.26
SRGAP1-204ENST00000542381 DOPEY1Q5JWR5 2465 aa0.96□□□□□ -2.26
SRGAP1-204ENST00000542381 SPTBN5Q9NRC6 3674 aaKnown RBP0.96□□□□□ -2.26
SRGAP1-204ENST00000542381 NWD1Q149M9 1564 aa0.96□□□□□ -2.26
SRGAP1-204ENST00000542381 CPS1P31327 1500 aa0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 DCAF1Q9Y4B6 1507 aa0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 IGF2RP11717 2491 aa0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 C3P01024 1663 aa0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 ATOX1O00244 68 aa0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 NDUFC1O43677 76 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms