RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 GAGE4Q13068 117 aa6.72□□□□□ -1.33
CNOT4-212ENST00000541284 GAGE5Q13069 117 aa6.72□□□□□ -1.33
CNOT4-212ENST00000541284 Q6Q795 121 aa6.72□□□□□ -1.33
CNOT4-212ENST00000541284 RPL36ALQ969Q0 106 aaKnown RBP6.72□□□□□ -1.33
CNOT4-212ENST00000541284 FAM218AQ96MZ4 157 aa6.72□□□□□ -1.33
CNOT4-212ENST00000541284 UNC79Q9P2D8 2635 aa6.71□□□□□ -1.33
CNOT4-212ENST00000541284 TRAV8-4A0A0B4J246 113 aa6.71□□□□□ -1.33
CNOT4-212ENST00000541284 A0A1W2PRX2 142 aa6.71□□□□□ -1.33
CNOT4-212ENST00000541284 COX7A2LO14548 114 aa6.71□□□□□ -1.33
CNOT4-212ENST00000541284 NOP10Q9NPE3 64 aaKnown RBP6.71□□□□□ -1.33
CNOT4-212ENST00000541284 FAM240AA0A1B0GVK7 77 aa6.71□□□□□ -1.34
CNOT4-212ENST00000541284 TLN2Q9Y4G6 2542 aa6.71□□□□□ -1.34
CNOT4-212ENST00000541284 A0A0U1RRA0 63 aa6.7□□□□□ -1.34
CNOT4-212ENST00000541284 DGAT2L7PQ6IED9 249 aa6.7□□□□□ -1.34
CNOT4-212ENST00000541284 WFDC11Q8NEX6 87 aa6.7□□□□□ -1.34
CNOT4-212ENST00000541284 NOTCH3Q9UM47 2321 aa6.7□□□□□ -1.34
CNOT4-212ENST00000541284 COX6CP09669 75 aa6.7□□□□□ -1.34
CNOT4-212ENST00000541284 C15orf53Q8NAA6 179 aa6.7□□□□□ -1.34
CNOT4-212ENST00000541284 OVOL2Q9BRP0 275 aa6.7□□□□□ -1.34
CNOT4-212ENST00000541284 IGKV2-28A0A075B6P5 120 aa6.69□□□□□ -1.34
CNOT4-212ENST00000541284 IGKV2D-28P01615 120 aa6.69□□□□□ -1.34
CNOT4-212ENST00000541284 TEX29Q8N6K0 151 aa6.69□□□□□ -1.34
CNOT4-212ENST00000541284 FLNAP21333 2647 aaKnown RBP6.69□□□□□ -1.34
CNOT4-212ENST00000541284 NDUFV3P56181 108 aaKnown RBP6.69□□□□□ -1.34
CNOT4-212ENST00000541284 JMJD1CQ15652 2540 aa6.69□□□□□ -1.34
CNOT4-212ENST00000541284 SDIM1Q6ZPB5 146 aa6.69□□□□□ -1.34
CNOT4-212ENST00000541284 WNK1Q9H4A3 2382 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 CIRBPQ14011 172 aaKnown RBP6.68□□□□□ -1.34
CNOT4-212ENST00000541284 PRIMA1Q86XR5 153 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 SONP18583 2426 aaKnown RBP6.68□□□□□ -1.34
CNOT4-212ENST00000541284 IGLV1-51P01701 117 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 TMEM243Q9BU79 118 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 TRBV6-4A0A1B0GX49 114 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 RNASE1P07998 156 aaKnown RBP6.68□□□□□ -1.34
CNOT4-212ENST00000541284 HERV-K104P63124 156 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 FHL2Q14192 279 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 MRPL23Q16540 153 aaKnown RBP6.68□□□□□ -1.34
CNOT4-212ENST00000541284 TTC32Q5I0X7 151 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 LINC00337Q8N6G1 96 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 SMCR5Q8TEV8 140 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 FAM110AQ9BQ89 295 aa6.68□□□□□ -1.34
CNOT4-212ENST00000541284 LINC01006Q8NI28 216 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 C16orf74Q96GX8 76 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 ANAPC13Q9BS18 74 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 IGHV3OR16-9A0A0B4J2B5 98 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 SNCGO76070 127 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 GAGE7O76087 117 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 GAGE12FP0CL80 117 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 GAGE12GP0CL81 117 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 GAGE12IP0CL82 117 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 VWFP04275 2813 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 GAGE2BQ13066 116 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 GAGE2EQ4V326 116 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 GAGE2DQ9UEU5 116 aa6.67□□□□□ -1.34
CNOT4-212ENST00000541284 TRBV7-7A0A0K0K1E9 115 aa6.66□□□□□ -1.34
CNOT4-212ENST00000541284 TRACP01848 142 aa6.66□□□□□ -1.34
CNOT4-212ENST00000541284 RPL28P46779 137 aaKnown RBP6.65□□□□□ -1.34
CNOT4-212ENST00000541284 COX7B2Q8TF08 81 aa6.65□□□□□ -1.34
CNOT4-212ENST00000541284 RPL35AP18077 110 aaKnown RBP6.65□□□□□ -1.35
CNOT4-212ENST00000541284 MEIG1Q5JSS6 88 aa6.65□□□□□ -1.35
CNOT4-212ENST00000541284 TRBV6-8A0A0A6YYG3 113 aa6.64□□□□□ -1.35
CNOT4-212ENST00000541284 CCDC179H3BU77 68 aa6.64□□□□□ -1.35
CNOT4-212ENST00000541284 KRTAP10-3P60369 221 aa6.64□□□□□ -1.35
CNOT4-212ENST00000541284 FAM222AQ5U5X8 452 aa6.64□□□□□ -1.35
CNOT4-212ENST00000541284 LINC00612Q8N6U2 182 aa6.64□□□□□ -1.35
CNOT4-212ENST00000541284 GAGE6Q13070 117 aa6.64□□□□□ -1.35
CNOT4-212ENST00000541284 MIR7-3HGQ8N6C7 128 aa6.64□□□□□ -1.35
CNOT4-212ENST00000541284 HIST2H2BCQ6DN03 193 aa6.64□□□□□ -1.35
CNOT4-212ENST00000541284 C9orf129Q5T035 196 aaKnown RBP6.63□□□□□ -1.35
CNOT4-212ENST00000541284 TENM1Q9UKZ4 2725 aa6.63□□□□□ -1.35
CNOT4-212ENST00000541284 C2CD3Q4AC94 2353 aa6.63□□□□□ -1.35
CNOT4-212ENST00000541284 A0A087WZ39 114 aa6.63□□□□□ -1.35
CNOT4-212ENST00000541284 CCL18P55774 89 aa6.63□□□□□ -1.35
CNOT4-212ENST00000541284 HELZ2Q9BYK8 2649 aaKnown RBP6.63□□□□□ -1.35
CNOT4-212ENST00000541284 NSD1Q96L73 2696 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-212ENST00000541284 COPS9Q8WXC6 57 aa6.63□□□□□ -1.35
CNOT4-212ENST00000541284 TRGV2A0A075B6R0 118 aa6.62□□□□□ -1.35
CNOT4-212ENST00000541284 UBE2L6O14933 153 aa6.62□□□□□ -1.35
CNOT4-212ENST00000541284 A0A087WYN8 130 aa6.62□□□□□ -1.35
CNOT4-212ENST00000541284 J3QKU1 62 aa6.62□□□□□ -1.35
CNOT4-212ENST00000541284 PF4P02776 101 aa6.62□□□□□ -1.35
CNOT4-212ENST00000541284 HILS1P60008 231 aa6.62□□□□□ -1.35
CNOT4-212ENST00000541284 SMIM11BQ8TCY0 68 aa6.62□□□□□ -1.35
CNOT4-212ENST00000541284 BAALC-AS2P0C853 105 aa6.61□□□□□ -1.35
CNOT4-212ENST00000541284 CMC4P56277 68 aaPredicted RBP6.61□□□□□ -1.35
CNOT4-212ENST00000541284 SND1-IT1Q9HBX3 110 aa6.61□□□□□ -1.35
CNOT4-212ENST00000541284 SETD2Q9BYW2 2564 aaPredicted RBP6.61□□□□□ -1.35
CNOT4-212ENST00000541284 OBSCN-AS1Q96MR7 158 aa6.61□□□□□ -1.35
CNOT4-212ENST00000541284 Q9HAA7 133 aa6.61□□□□□ -1.35
CNOT4-212ENST00000541284 TRAV13-2A0A0B4J235 113 aa6.6□□□□□ -1.35
CNOT4-212ENST00000541284 TRGV4A0A0C4DH28 118 aa6.6□□□□□ -1.35
CNOT4-212ENST00000541284 LINC00959A0A1B0GUT2 108 aa6.6□□□□□ -1.35
CNOT4-212ENST00000541284 B5MCH6 92 aa6.6□□□□□ -1.35
CNOT4-212ENST00000541284 IBA57-AS1B1ANH7 110 aa6.59□□□□□ -1.35
CNOT4-212ENST00000541284 LY6G6DO95868 133 aa6.59□□□□□ -1.35
CNOT4-212ENST00000541284 SS18L2Q9UHA2 77 aa6.59□□□□□ -1.35
CNOT4-212ENST00000541284 CCDC168Q8NDH2 2452 aa6.59□□□□□ -1.35
CNOT4-212ENST00000541284 ACYP1P07311 99 aa6.59□□□□□ -1.35
CNOT4-212ENST00000541284 KIR2DL5BQ8NHK3 375 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms