RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 C11orf44Q8N8P7 122 aa8.75□□□□□ -1.01
NPC1-202ENST00000540608 GAGE12JA6NER3 117 aa8.74□□□□□ -1.01
NPC1-202ENST00000540608 GAGE4Q13068 117 aa8.74□□□□□ -1.01
NPC1-202ENST00000540608 GAGE7O76087 117 aa8.74□□□□□ -1.01
NPC1-202ENST00000540608 GAGE12FP0CL80 117 aa8.74□□□□□ -1.01
NPC1-202ENST00000540608 GAGE12GP0CL81 117 aa8.74□□□□□ -1.01
NPC1-202ENST00000540608 GAGE12IP0CL82 117 aa8.74□□□□□ -1.01
NPC1-202ENST00000540608 NIPBLQ6KC79 2804 aaeCLIP8.74□□□□□ -1.01
NPC1-202ENST00000540608 ACYP1P07311 99 aa8.73□□□□□ -1.01
NPC1-202ENST00000540608 B5MCH6 92 aa8.73□□□□□ -1.01
NPC1-202ENST00000540608 TRACP01848 142 aa8.73□□□□□ -1.01
NPC1-202ENST00000540608 A0A1W2PRX2 142 aa8.73□□□□□ -1.01
NPC1-202ENST00000540608 TMEM86BQ8N661 226 aa8.73□□□□□ -1.01
NPC1-202ENST00000540608 UBE2L6O14933 153 aa8.72□□□□□ -1.01
NPC1-202ENST00000540608 TMEM243Q9BU79 118 aa8.72□□□□□ -1.01
NPC1-202ENST00000540608 TRBV7-7A0A0K0K1E9 115 aa8.72□□□□□ -1.01
NPC1-202ENST00000540608 DNAJC9-AS1A6NH13 148 aa8.72□□□□□ -1.01
NPC1-202ENST00000540608 WFDC11Q8NEX6 87 aa8.72□□□□□ -1.01
NPC1-202ENST00000540608 NOP10Q9NPE3 64 aaKnown RBP8.72□□□□□ -1.01
NPC1-202ENST00000540608 WNK1Q9H4A3 2382 aa8.71□□□□□ -1.01
NPC1-202ENST00000540608 CCDC179H3BU77 68 aa8.71□□□□□ -1.01
NPC1-202ENST00000540608 CCL24O00175 119 aa8.71□□□□□ -1.02
NPC1-202ENST00000540608 SS18L2Q9UHA2 77 aa8.71□□□□□ -1.02
NPC1-202ENST00000540608 PF4P02776 101 aa8.7□□□□□ -1.02
NPC1-202ENST00000540608 HIST2H2BCQ6DN03 193 aa8.7□□□□□ -1.02
NPC1-202ENST00000540608 BAALC-AS2P0C853 105 aa8.7□□□□□ -1.02
NPC1-202ENST00000540608 ESM1Q9NQ30 184 aa8.7□□□□□ -1.02
NPC1-202ENST00000540608 FLNAP21333 2647 aaKnown RBP8.7□□□□□ -1.02
NPC1-202ENST00000540608 TRAV13-2A0A0B4J235 113 aa8.69□□□□□ -1.02
NPC1-202ENST00000540608 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
NPC1-202ENST00000540608 PLAC8L1A1L4L8 177 aa8.68□□□□□ -1.02
NPC1-202ENST00000540608 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
NPC1-202ENST00000540608 CMC4P56277 68 aaPredicted RBP8.68□□□□□ -1.02
NPC1-202ENST00000540608 COX7B2Q8TF08 81 aa8.68□□□□□ -1.02
NPC1-202ENST00000540608 FAM218AQ96MZ4 157 aa8.68□□□□□ -1.02
NPC1-202ENST00000540608 TENM4Q6N022 2769 aa8.68□□□□□ -1.02
NPC1-202ENST00000540608 CCDC168Q8NDH2 2452 aa8.68□□□□□ -1.02
NPC1-202ENST00000540608 TRBV6-4A0A1B0GX49 114 aa8.68□□□□□ -1.02
NPC1-202ENST00000540608 FAM222AQ5U5X8 452 aa8.68□□□□□ -1.02
NPC1-202ENST00000540608 C16orf74Q96GX8 76 aa8.68□□□□□ -1.02
NPC1-202ENST00000540608 IMUPQ9GZP8 106 aa8.68□□□□□ -1.02
NPC1-202ENST00000540608 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
NPC1-202ENST00000540608 TRGV2A0A075B6R0 118 aa8.67□□□□□ -1.02
NPC1-202ENST00000540608 SETD2Q9BYW2 2564 aaPredicted RBP8.67□□□□□ -1.02
NPC1-202ENST00000540608 SETXQ7Z333 2677 aaKnown RBP8.67□□□□□ -1.02
NPC1-202ENST00000540608 LOC100131303A0A0U1RQF7 123 aa8.67□□□□□ -1.02
NPC1-202ENST00000540608 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
NPC1-202ENST00000540608 OVOL2Q9BRP0 275 aa8.66□□□□□ -1.02
NPC1-202ENST00000540608 CRPP02741 224 aa8.66□□□□□ -1.02
NPC1-202ENST00000540608 SDIM1Q6ZPB5 146 aa8.66□□□□□ -1.02
NPC1-202ENST00000540608 LINC00643Q86TS7 51 aa8.66□□□□□ -1.02
NPC1-202ENST00000540608 IGKV2-28A0A075B6P5 120 aa8.65□□□□□ -1.02
NPC1-202ENST00000540608 IGKV2D-28P01615 120 aa8.65□□□□□ -1.02
NPC1-202ENST00000540608 LINC00337Q8N6G1 96 aa8.65□□□□□ -1.02
NPC1-202ENST00000540608 SMCR5Q8TEV8 140 aa8.65□□□□□ -1.02
NPC1-202ENST00000540608 CHCHD5Q9BSY4 110 aa8.65□□□□□ -1.02
NPC1-202ENST00000540608 SND1-IT1Q9HBX3 110 aa8.65□□□□□ -1.02
NPC1-202ENST00000540608 TRGV4A0A0C4DH28 118 aa8.64□□□□□ -1.03
NPC1-202ENST00000540608 TOMM7Q9P0U1 55 aa8.64□□□□□ -1.03
NPC1-202ENST00000540608 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
NPC1-202ENST00000540608 JMJD1CQ15652 2540 aa8.64□□□□□ -1.03
NPC1-202ENST00000540608 IGLV4-60A0A075B6I1 120 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 MALP21145 153 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 LINC00158P58513 81 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 CSNK1G2-AS1Q8NCQ2 148 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 FAM110AQ9BQ89 295 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 WFDC10AQ9H1F0 79 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 Q9HAA7 133 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 PDZD2O15018 2839 aa8.63□□□□□ -1.03
NPC1-202ENST00000540608 IGKV3OR2-268A0A0C4DH90 116 aa8.62□□□□□ -1.03
NPC1-202ENST00000540608 RPL35AP18077 110 aaKnown RBP8.62□□□□□ -1.03
NPC1-202ENST00000540608 FHL2Q14192 279 aa8.62□□□□□ -1.03
NPC1-202ENST00000540608 C19orf73Q9NVV2 129 aa8.62□□□□□ -1.03
NPC1-202ENST00000540608 NOTCH3Q9UM47 2321 aa8.62□□□□□ -1.03
NPC1-202ENST00000540608 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
NPC1-202ENST00000540608 LINC01006Q8NI28 216 aa8.62□□□□□ -1.03
NPC1-202ENST00000540608 SMIM11BQ8TCY0 68 aa8.62□□□□□ -1.03
NPC1-202ENST00000540608 A0A087WZ39 114 aa8.61□□□□□ -1.03
NPC1-202ENST00000540608 CCL18P55774 89 aa8.61□□□□□ -1.03
NPC1-202ENST00000540608 ACANP16112 2415 aa8.61□□□□□ -1.03
NPC1-202ENST00000540608 KRTAP1-1Q07627 177 aa8.61□□□□□ -1.03
NPC1-202ENST00000540608 FAM236AA0A1B0GUQ0 79 aa8.61□□□□□ -1.03
NPC1-202ENST00000540608 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
NPC1-202ENST00000540608 H0YGX0 51 aa8.61□□□□□ -1.03
NPC1-202ENST00000540608 IGLV1-51P01701 117 aa8.6□□□□□ -1.03
NPC1-202ENST00000540608 A0A087WYN8 130 aa8.59□□□□□ -1.03
NPC1-202ENST00000540608 DNAL4O96015 105 aa8.59□□□□□ -1.03
NPC1-202ENST00000540608 MTORP42345 2549 aa8.59□□□□□ -1.03
NPC1-202ENST00000540608 CXCL5P42830 114 aa8.59□□□□□ -1.03
NPC1-202ENST00000540608 GAGE2AQ6NT46 116 aa8.59□□□□□ -1.03
NPC1-202ENST00000540608 C5orf38Q86SI9 138 aa8.59□□□□□ -1.03
NPC1-202ENST00000540608 ANK3Q12955 4377 aaKnown RBP8.59□□□□□ -1.03
NPC1-202ENST00000540608 C2CD3Q4AC94 2353 aa8.58□□□□□ -1.04
NPC1-202ENST00000540608 PFN2P35080 140 aa8.58□□□□□ -1.04
NPC1-202ENST00000540608 ITPR2Q14571 2701 aa8.58□□□□□ -1.04
NPC1-202ENST00000540608 LINC00959A0A1B0GUT2 108 aa8.57□□□□□ -1.04
NPC1-202ENST00000540608 C16orf95Q9H693 158 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms