RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 A0A0J9YXY3 114 aa11.87□□□□□ -0.51
LTBR-207ENST00000539925 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
LTBR-207ENST00000539925 C9orf118A6NHY6 69 aa11.87□□□□□ -0.51
LTBR-207ENST00000539925 SMIM1B2RUZ4 78 aa11.87□□□□□ -0.51
LTBR-207ENST00000539925 LINC01561Q8N1V8 128 aa11.87□□□□□ -0.51
LTBR-207ENST00000539925 SFTA2Q6UW10 78 aa11.87□□□□□ -0.51
LTBR-207ENST00000539925 C11orf45Q8TAV5 145 aa11.87□□□□□ -0.51
LTBR-207ENST00000539925 TM2D3Q9BRN9 247 aa11.87□□□□□ -0.51
LTBR-207ENST00000539925 NBEAL2Q6ZNJ1 2754 aa11.87□□□□□ -0.51
LTBR-207ENST00000539925 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
LTBR-207ENST00000539925 HERV-K104P63124 156 aa11.86□□□□□ -0.51
LTBR-207ENST00000539925 CIRBPQ14011 172 aaKnown RBP11.86□□□□□ -0.51
LTBR-207ENST00000539925 C10orf126Q8N4M7 172 aa11.86□□□□□ -0.51
LTBR-207ENST00000539925 NHP2Q9NX24 153 aaKnown RBP11.86□□□□□ -0.51
LTBR-207ENST00000539925 A0A0J9YWU9 116 aa11.85□□□□□ -0.51
LTBR-207ENST00000539925 IGHV3OR16-9A0A0B4J2B5 98 aa11.84□□□□□ -0.51
LTBR-207ENST00000539925 K7EIL1 84 aa11.84□□□□□ -0.51
LTBR-207ENST00000539925 IGHV3-30P01768 117 aa11.84□□□□□ -0.51
LTBR-207ENST00000539925 IGHV3-30-5P0DP03 117 aa11.84□□□□□ -0.51
LTBR-207ENST00000539925 RPL24P83731 157 aaKnown RBP11.84□□□□□ -0.51
LTBR-207ENST00000539925 COPS9Q8WXC6 57 aa11.84□□□□□ -0.51
LTBR-207ENST00000539925 A0A087WZ39 114 aa11.84□□□□□ -0.51
LTBR-207ENST00000539925 VAMP3Q15836 100 aa11.84□□□□□ -0.51
LTBR-207ENST00000539925 Q6ZTC4 211 aa11.84□□□□□ -0.51
LTBR-207ENST00000539925 SPANXDQ9BXN6 97 aa11.84□□□□□ -0.51
LTBR-207ENST00000539925 SPANXCQ9NY87 97 aa11.84□□□□□ -0.51
LTBR-207ENST00000539925 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
LTBR-207ENST00000539925 IFITM1P13164 125 aa11.81□□□□□ -0.52
LTBR-207ENST00000539925 DEFB121Q5J5C9 76 aa11.81□□□□□ -0.52
LTBR-207ENST00000539925 LYPD5Q6UWN5 251 aa11.81□□□□□ -0.52
LTBR-207ENST00000539925 DEFB131BA0A096LNP1 70 aa11.81□□□□□ -0.52
LTBR-207ENST00000539925 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
LTBR-207ENST00000539925 K7EP13 123 aa11.81□□□□□ -0.52
LTBR-207ENST00000539925 UBE2V1Q13404 147 aa11.81□□□□□ -0.52
LTBR-207ENST00000539925 MDFIQ99750 246 aa11.81□□□□□ -0.52
LTBR-207ENST00000539925 ANGP03950 147 aaKnown RBP11.8□□□□□ -0.52
LTBR-207ENST00000539925 Q9H8V8 135 aa11.8□□□□□ -0.52
LTBR-207ENST00000539925 MIAQ16674 131 aa11.79□□□□□ -0.52
LTBR-207ENST00000539925 GTF2H5Q6ZYL4 71 aa11.79□□□□□ -0.52
LTBR-207ENST00000539925 COX7B2Q8TF08 81 aa11.79□□□□□ -0.52
LTBR-207ENST00000539925 RAB37Q96AX2 223 aa11.79□□□□□ -0.52
LTBR-207ENST00000539925 ZNF625Q96I27 306 aaPredicted RBP11.79□□□□□ -0.52
LTBR-207ENST00000539925 LITAFQ99732 161 aa11.79□□□□□ -0.52
LTBR-207ENST00000539925 TRAV10A0A0B4J240 114 aa11.78□□□□□ -0.52
LTBR-207ENST00000539925 H3BUT2 72 aa11.78□□□□□ -0.52
LTBR-207ENST00000539925 FABP2P12104 132 aa11.78□□□□□ -0.52
LTBR-207ENST00000539925 REG3AQ06141 175 aa11.78□□□□□ -0.52
LTBR-207ENST00000539925 CD164L2Q6UWJ8 174 aa11.78□□□□□ -0.52
LTBR-207ENST00000539925 PPDPFQ9H3Y8 114 aa11.78□□□□□ -0.52
LTBR-207ENST00000539925 LINC00269Q8N2A0 174 aa11.78□□□□□ -0.52
LTBR-207ENST00000539925 C15orf53Q8NAA6 179 aa11.78□□□□□ -0.52
LTBR-207ENST00000539925 A0A1W2PPM0 123 aa11.77□□□□□ -0.53
LTBR-207ENST00000539925 NANOS2P60321 138 aaKnown RBP11.77□□□□□ -0.53
LTBR-207ENST00000539925 K7ERJ3 54 aa11.76□□□□□ -0.53
LTBR-207ENST00000539925 A0A0B4J2C4 111 aa11.75□□□□□ -0.53
LTBR-207ENST00000539925 IGLL5B9A064 214 aa11.75□□□□□ -0.53
LTBR-207ENST00000539925 PRB2P02812 416 aaPredicted RBP11.75□□□□□ -0.53
LTBR-207ENST00000539925 PRSS2P07478 247 aa11.75□□□□□ -0.53
LTBR-207ENST00000539925 XCL1P47992 114 aa11.75□□□□□ -0.53
LTBR-207ENST00000539925 LYRM7Q5U5X0 104 aa11.75□□□□□ -0.53
LTBR-207ENST00000539925 MUSTN1Q8IVN3 82 aa11.75□□□□□ -0.53
LTBR-207ENST00000539925 PRR34Q9NV39 138 aa11.75□□□□□ -0.53
LTBR-207ENST00000539925 TRAV8-4A0A0B4J246 113 aa11.74□□□□□ -0.53
LTBR-207ENST00000539925 GAGE10A6NGK3 116 aa11.74□□□□□ -0.53
LTBR-207ENST00000539925 COX7A2LO14548 114 aa11.74□□□□□ -0.53
LTBR-207ENST00000539925 C5orf38Q86SI9 138 aa11.74□□□□□ -0.53
LTBR-207ENST00000539925 Q8IZM0 81 aa11.74□□□□□ -0.53
LTBR-207ENST00000539925 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
LTBR-207ENST00000539925 PKD1L1Q8TDX9 2849 aa11.73□□□□□ -0.53
LTBR-207ENST00000539925 A4D1N5 150 aa11.73□□□□□ -0.53
LTBR-207ENST00000539925 MEIG1Q5JSS6 88 aa11.73□□□□□ -0.53
LTBR-207ENST00000539925 MRAPQ8TCY5 172 aa11.73□□□□□ -0.53
LTBR-207ENST00000539925 PRO1854Q9UHT4 67 aa11.73□□□□□ -0.53
LTBR-207ENST00000539925 DNAH3Q8TD57 4116 aa11.73□□□□□ -0.53
LTBR-207ENST00000539925 CMYA5Q8N3K9 4069 aa11.73□□□□□ -0.53
LTBR-207ENST00000539925 CFC1BP0CG36 223 aa11.72□□□□□ -0.53
LTBR-207ENST00000539925 CFC1P0CG37 223 aa11.72□□□□□ -0.53
LTBR-207ENST00000539925 CXCL5P42830 114 aa11.72□□□□□ -0.53
LTBR-207ENST00000539925 TOMM7Q9P0U1 55 aa11.72□□□□□ -0.53
LTBR-207ENST00000539925 K7EP34 96 aa11.71□□□□□ -0.53
LTBR-207ENST00000539925 APOMO95445 188 aa11.71□□□□□ -0.53
LTBR-207ENST00000539925 CRPP02741 224 aa11.71□□□□□ -0.53
LTBR-207ENST00000539925 ADAMTSL4-AS1Q5T5F5 129 aa11.71□□□□□ -0.53
LTBR-207ENST00000539925 ANK2Q01484 3957 aa11.71□□□□□ -0.54
LTBR-207ENST00000539925 C6orf226Q5I0X4 101 aa11.71□□□□□ -0.54
LTBR-207ENST00000539925 CLPSL2Q6UWE3 100 aa11.71□□□□□ -0.54
LTBR-207ENST00000539925 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.54
LTBR-207ENST00000539925 NOTCH1P46531 2555 aa11.71□□□□□ -0.54
LTBR-207ENST00000539925 IBA57-AS1B1ANH7 110 aa11.7□□□□□ -0.54
LTBR-207ENST00000539925 SPCS1Q9Y6A9 102 aa11.7□□□□□ -0.54
LTBR-207ENST00000539925 MALP21145 153 aa11.69□□□□□ -0.54
LTBR-207ENST00000539925 KLK12Q9UKR0 248 aa11.69□□□□□ -0.54
LTBR-207ENST00000539925 B9D2Q9BPU9 175 aa11.68□□□□□ -0.54
LTBR-207ENST00000539925 MGAM2Q2M2H8 2515 aa11.68□□□□□ -0.54
LTBR-207ENST00000539925 ESRGQ1W209 222 aa11.68□□□□□ -0.54
LTBR-207ENST00000539925 LINC01556Q5JQF7 62 aa11.68□□□□□ -0.54
LTBR-207ENST00000539925 LINC00308Q8TCZ7 52 aa11.68□□□□□ -0.54
LTBR-207ENST00000539925 FOXI1Q12951 378 aa11.67□□□□□ -0.54
LTBR-207ENST00000539925 CFAP161Q6P656 301 aa11.67□□□□□ -0.54
LTBR-207ENST00000539925 NAA38Q9BRA0 125 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms