RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 UBE2L6O14933 153 aa6.32□□□□□ -1.4
GGA3-202ENST00000538886 NPC2P61916 151 aa6.32□□□□□ -1.4
GGA3-202ENST00000538886 KLK9Q2XQG4 91 aa6.32□□□□□ -1.4
GGA3-202ENST00000538886 CEMP1Q6PRD7 247 aaPredicted RBP6.32□□□□□ -1.4
GGA3-202ENST00000538886 MLST8Q9BVC4 326 aa6.32□□□□□ -1.4
GGA3-202ENST00000538886 LENEPQ9Y5L5 61 aa6.32□□□□□ -1.4
GGA3-202ENST00000538886 TRAV13-1A0A0B4J241 112 aa6.32□□□□□ -1.4
GGA3-202ENST00000538886 RBMY1A1P0DJD3 496 aaKnown RBP6.32□□□□□ -1.4
GGA3-202ENST00000538886 RBMY1CP0DJD4 496 aa6.32□□□□□ -1.4
GGA3-202ENST00000538886 RBMY1FQ15415 496 aaKnown RBP6.32□□□□□ -1.4
GGA3-202ENST00000538886 ODF3Q96PU9 254 aa6.32□□□□□ -1.4
GGA3-202ENST00000538886 Q9HAA7 133 aa6.32□□□□□ -1.4
GGA3-202ENST00000538886 IGKV3D-20A0A0C4DH25 116 aa6.31□□□□□ -1.4
GGA3-202ENST00000538886 CCL18P55774 89 aa6.31□□□□□ -1.4
GGA3-202ENST00000538886 CFC1BP0CG36 223 aa6.31□□□□□ -1.4
GGA3-202ENST00000538886 CFC1P0CG37 223 aa6.31□□□□□ -1.4
GGA3-202ENST00000538886 RPL36AP83881 106 aaKnown RBP6.31□□□□□ -1.4
GGA3-202ENST00000538886 RPL36ALQ969Q0 106 aaKnown RBP6.31□□□□□ -1.4
GGA3-202ENST00000538886 WIPF1O43516 503 aa6.31□□□□□ -1.4
GGA3-202ENST00000538886 GAS8-AS1O95177 125 aa6.31□□□□□ -1.4
GGA3-202ENST00000538886 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
GGA3-202ENST00000538886 C11orf21Q9P2W6 132 aa6.31□□□□□ -1.4
GGA3-202ENST00000538886 ZNF22P17026 224 aaPredicted RBP6.3□□□□□ -1.4
GGA3-202ENST00000538886 SEC61GP60059 68 aa6.3□□□□□ -1.4
GGA3-202ENST00000538886 MUC7Q8TAX7 377 aa6.3□□□□□ -1.4
GGA3-202ENST00000538886 FBN3Q75N90 2809 aa6.3□□□□□ -1.4
GGA3-202ENST00000538886 P0DMU3 169 aa6.3□□□□□ -1.4
GGA3-202ENST00000538886 FAM231AP0DMU4 169 aa6.3□□□□□ -1.4
GGA3-202ENST00000538886 FAM231CP0DMU5 169 aa6.3□□□□□ -1.4
GGA3-202ENST00000538886 V9GYY9 64 aa6.3□□□□□ -1.4
GGA3-202ENST00000538886 TRAV10A0A0B4J240 114 aa6.3□□□□□ -1.4
GGA3-202ENST00000538886 TINCRA0A1B0GVN0 87 aa6.3□□□□□ -1.4
GGA3-202ENST00000538886 PSCAO43653 123 aa6.3□□□□□ -1.4
GGA3-202ENST00000538886 CRIP1P50238 77 aa6.29□□□□□ -1.4
GGA3-202ENST00000538886 UBE2D3P61077 147 aa6.29□□□□□ -1.4
GGA3-202ENST00000538886 UBE2D2P62837 147 aa6.29□□□□□ -1.4
GGA3-202ENST00000538886 CLPSL2Q6UWE3 100 aa6.29□□□□□ -1.4
GGA3-202ENST00000538886 DNHD1Q96M86 4753 aa6.29□□□□□ -1.4
GGA3-202ENST00000538886 KLLNB2CW77 178 aa6.29□□□□□ -1.4
GGA3-202ENST00000538886 A0A1B0GX51 115 aa6.29□□□□□ -1.4
GGA3-202ENST00000538886 IGLV2-11P01706 119 aa6.29□□□□□ -1.4
GGA3-202ENST00000538886 IGHV3-30P01768 117 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 IGHV3-33P01772 117 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 IGHV3-30-3P0DP02 117 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 IGHV3-30-5P0DP03 117 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 KPRPQ5T749 579 aaPredicted RBP6.28□□□□□ -1.4
GGA3-202ENST00000538886 DPH3Q96FX2 82 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 X6R8D5 127 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 LOC100131303A0A0U1RQF7 123 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 LYRM9A8MSI8 78 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 Q8N8P6 123 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 BRK1Q8WUW1 75 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 PRO0255Q9UI72 69 aa6.28□□□□□ -1.4
GGA3-202ENST00000538886 TRBV10-2A0A0K0K1G8 114 aa6.27□□□□□ -1.41
GGA3-202ENST00000538886 LINC00526Q96FQ7 95 aa6.27□□□□□ -1.41
GGA3-202ENST00000538886 CLEC2BQ92478 149 aa6.27□□□□□ -1.41
GGA3-202ENST00000538886 GIG44P09565 113 aaPredicted RBP6.27□□□□□ -1.41
GGA3-202ENST00000538886 CIRBPQ14011 172 aaKnown RBP6.27□□□□□ -1.41
GGA3-202ENST00000538886 DPH3P1Q9H4G8 78 aa6.27□□□□□ -1.41
GGA3-202ENST00000538886 ICOSQ9Y6W8 199 aa6.27□□□□□ -1.41
GGA3-202ENST00000538886 COX7CP15954 63 aa6.26□□□□□ -1.41
GGA3-202ENST00000538886 UBE2D1P51668 147 aa6.26□□□□□ -1.41
GGA3-202ENST00000538886 HIST1H4AP62805 103 aaKnown RBP6.26□□□□□ -1.41
GGA3-202ENST00000538886 RHOHQ15669 191 aa6.26□□□□□ -1.41
GGA3-202ENST00000538886 TENM2Q9NT68 2774 aa6.26□□□□□ -1.41
GGA3-202ENST00000538886 FAM236DA0A1B0GTK5 79 aa6.26□□□□□ -1.41
GGA3-202ENST00000538886 FAM236CP0DP71 79 aa6.26□□□□□ -1.41
GGA3-202ENST00000538886 TM2D3Q9BRN9 247 aa6.25□□□□□ -1.41
GGA3-202ENST00000538886 TP53TG1Q9Y2A0 90 aa6.25□□□□□ -1.41
GGA3-202ENST00000538886 IGHV4-4A0A075B6R2 117 aa6.25□□□□□ -1.41
GGA3-202ENST00000538886 IGKV3D-7A0A0C4DH55 119 aa6.25□□□□□ -1.41
GGA3-202ENST00000538886 CRPP02741 224 aa6.25□□□□□ -1.41
GGA3-202ENST00000538886 PFN2P35080 140 aa6.25□□□□□ -1.41
GGA3-202ENST00000538886 C2orf66Q6UXQ4 117 aa6.25□□□□□ -1.41
GGA3-202ENST00000538886 Q8NAQ8 132 aa6.25□□□□□ -1.41
GGA3-202ENST00000538886 NUPR2A6NF83 97 aa6.24□□□□□ -1.41
GGA3-202ENST00000538886 SLC25A29Q8N8R3 303 aa6.24□□□□□ -1.41
GGA3-202ENST00000538886 RNASE3P12724 160 aaKnown RBP6.24□□□□□ -1.41
GGA3-202ENST00000538886 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.24□□□□□ -1.41
GGA3-202ENST00000538886 ATOX1O00244 68 aa6.24□□□□□ -1.41
GGA3-202ENST00000538886 A0A0U1RRA0 63 aa6.23□□□□□ -1.41
GGA3-202ENST00000538886 ANGP03950 147 aaKnown RBP6.23□□□□□ -1.41
GGA3-202ENST00000538886 ORMDL2Q53FV1 153 aa6.23□□□□□ -1.41
GGA3-202ENST00000538886 MUSTN1Q8IVN3 82 aa6.23□□□□□ -1.41
GGA3-202ENST00000538886 IGLV10-54A0A075B6I4 117 aa6.23□□□□□ -1.41
GGA3-202ENST00000538886 RPL39LQ96EH5 51 aaKnown RBP6.23□□□□□ -1.41
GGA3-202ENST00000538886 BAALCQ8WXS3 180 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 J3QQQ9 107 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 K7EQD1 137 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 DNAL4O96015 105 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 C1orf195Q5TG92 126 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 SDIM1Q6ZPB5 146 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 CSNK1G2-AS1Q8NCQ2 148 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 SDHAF1A6NFY7 115 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 F8WDY8 70 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 TRIAP1O43715 76 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 TMEM258P61165 79 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 RNASE13Q5GAN3 156 aaKnown RBP6.22□□□□□ -1.41
GGA3-202ENST00000538886 LINC00643Q86TS7 51 aa6.22□□□□□ -1.41
GGA3-202ENST00000538886 VSIG2Q96IQ7 327 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms