RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 HERVK_113P61574 105 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 MUC7Q8TAX7 377 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 LINC00527Q9UJ94 153 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 ZANQ9Y493 2812 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 TLN2Q9Y4G6 2542 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 TRBV7-3A0A075B6L6 115 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 TMSB15BA0A087X1C1 80 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 MYMXA0A1B0GTQ4 84 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 A8MUN3 132 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 H3BUX3 64 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 CXCL5P42830 114 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 CHAC1Q9BUX1 264 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 DKK2Q9UBU2 259 aa4.89□□□□□ -1.63
PTPRB-203ENST00000538174 IGHV3-16A0A0C4DH30 117 aa4.88□□□□□ -1.63
PTPRB-203ENST00000538174 IGLL5B9A064 214 aa4.88□□□□□ -1.63
PTPRB-203ENST00000538174 K7EIL1 84 aa4.88□□□□□ -1.63
PTPRB-203ENST00000538174 K7ERJ3 54 aa4.88□□□□□ -1.63
PTPRB-203ENST00000538174 ZNF73O43830 326 aaPredicted RBP4.88□□□□□ -1.63
PTPRB-203ENST00000538174 EIF4EBP3O60516 100 aaPredicted RBP4.88□□□□□ -1.63
PTPRB-203ENST00000538174 PRR9Q5T870 116 aa4.88□□□□□ -1.63
PTPRB-203ENST00000538174 SCGB3A1Q96QR1 104 aa4.88□□□□□ -1.63
PTPRB-203ENST00000538174 S4R3C0 116 aa4.88□□□□□ -1.63
PTPRB-203ENST00000538174 S100A4P26447 101 aaKnown RBP4.88□□□□□ -1.63
PTPRB-203ENST00000538174 PRB3Q04118 309 aaPredicted RBP4.88□□□□□ -1.63
PTPRB-203ENST00000538174 Q6ZSV7 163 aa4.88□□□□□ -1.63
PTPRB-203ENST00000538174 TRAV8-3A0A0A6YYJ7 113 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 H3BVH4 76 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 TRIAP1O43715 76 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 IGHV4-38-2P0DP08 117 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 ZNF876PQ49A33 203 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 CASC10Q5T4H9 136 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 C2orf66Q6UXQ4 117 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 MRPL35Q9NZE8 188 aaKnown RBP4.87□□□□□ -1.63
PTPRB-203ENST00000538174 IGHV1OR15-1A0A075B7D0 117 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 LST1O00453 97 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 SBSPONQ8IVN8 264 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 LINC00337Q8N6G1 96 aa4.87□□□□□ -1.63
PTPRB-203ENST00000538174 RYR3Q15413 4870 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 A0A0J9YXY3 114 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 SDHAF1A6NFY7 115 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 UBE2D1P51668 147 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 DEFB112Q30KQ8 113 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 CEMP1Q6PRD7 247 aaPredicted RBP4.86□□□□□ -1.63
PTPRB-203ENST00000538174 ZFP2Q6ZN57 461 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 Q9HAA7 133 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 A0A087WZ39 114 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 M0QY20 66 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 Q6ZVQ6 151 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 COPS9Q8WXC6 57 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 UPK3BQ9BT76 320 aa4.86□□□□□ -1.63
PTPRB-203ENST00000538174 CUBNO60494 3623 aa4.85□□□□□ -1.63
PTPRB-203ENST00000538174 H0Y9J4 135 aa4.85□□□□□ -1.63
PTPRB-203ENST00000538174 TMEM256-PLSCR3K7ERE1 68 aa4.85□□□□□ -1.63
PTPRB-203ENST00000538174 LGALS3P17931 250 aaKnown RBP4.85□□□□□ -1.63
PTPRB-203ENST00000538174 IGFL4Q6B9Z1 124 aa4.85□□□□□ -1.63
PTPRB-203ENST00000538174 C4orf3Q8WVX3 66 aa4.85□□□□□ -1.63
PTPRB-203ENST00000538174 LOC100131303A0A0U1RQF7 123 aa4.85□□□□□ -1.63
PTPRB-203ENST00000538174 ATOX1O00244 68 aa4.85□□□□□ -1.63
PTPRB-203ENST00000538174 TIMM17BO60830 172 aa4.85□□□□□ -1.63
PTPRB-203ENST00000538174 MRPS36P82909 103 aaKnown RBP4.85□□□□□ -1.63
PTPRB-203ENST00000538174 C11orf72Q8NBR9 251 aa4.85□□□□□ -1.63
PTPRB-203ENST00000538174 ZNF702PQ9H963 129 aa4.85□□□□□ -1.63
PTPRB-203ENST00000538174 IGKV2D-26A0A0A0MRZ7 120 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 I3L3M4 83 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 SUMO4Q6EEV6 95 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 SLC25A29Q8N8R3 303 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 AMELXQ99217 191 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 KLK15Q9H2R5 256 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 IGLV4-69A0A075B6H9 119 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 UBE2L6O14933 153 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 LEPROTO15243 131 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 TRBV12-3P01733 135 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 LINC00528Q8N1L1 170 aa4.84□□□□□ -1.63
PTPRB-203ENST00000538174 RYR2Q92736 4967 aa4.83□□□□□ -1.64
PTPRB-203ENST00000538174 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
PTPRB-203ENST00000538174 SCGB1C2P0DMR2 95 aa4.83□□□□□ -1.64
PTPRB-203ENST00000538174 LINC00313P59037 77 aa4.83□□□□□ -1.64
PTPRB-203ENST00000538174 BLCAPP62952 87 aa4.83□□□□□ -1.64
PTPRB-203ENST00000538174 MAPKAPK5-AS1Q8N8E1 139 aa4.83□□□□□ -1.64
PTPRB-203ENST00000538174 C20orf203Q8NBC4 194 aa4.83□□□□□ -1.64
PTPRB-203ENST00000538174 KMT2CQ8NEZ4 4911 aaKnown RBP4.83□□□□□ -1.64
PTPRB-203ENST00000538174 A0A0B4J2C4 111 aa4.83□□□□□ -1.64
PTPRB-203ENST00000538174 C14orf178Q8N769 122 aaPredicted RBP4.83□□□□□ -1.64
PTPRB-203ENST00000538174 ALMS1Q8TCU4 4167 aa4.83□□□□□ -1.64
PTPRB-203ENST00000538174 ARHGAP32A7KAX9 2087 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 H7C423 109 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 TSHBP01222 138 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 UBE2D3P61077 147 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 UBE2D2P62837 147 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 BRD3OSQ6XYD6 125 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 LCA10Q71F78 164 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 IGLV5-45A0A087WSX0 123 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 TRBV10-1A0A0K0K1A3 114 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 ADARB2-AS1A8MUL3 147 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 FXYD2P54710 66 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 MP68P56378 58 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 MAP6D1Q9H9H5 199 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 VPS13CQ709C8 3753 aa4.82□□□□□ -1.64
PTPRB-203ENST00000538174 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms