RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 IFITM1P13164 125 aa10.99□□□□□ -0.65
MKS1-204ENST00000537529 PSMB2P49721 201 aa10.99□□□□□ -0.65
MKS1-204ENST00000537529 NSD1Q96L73 2696 aaPredicted RBP10.99□□□□□ -0.65
MKS1-204ENST00000537529 Q9H8V8 135 aa10.98□□□□□ -0.65
MKS1-204ENST00000537529 TRBV20-1A0A075B6N2 111 aa10.97□□□□□ -0.65
MKS1-204ENST00000537529 WFDC2Q14508 124 aa10.97□□□□□ -0.65
MKS1-204ENST00000537529 PRO0461Q9UI25 63 aa10.97□□□□□ -0.65
MKS1-204ENST00000537529 WIPF1O43516 503 aa10.97□□□□□ -0.65
MKS1-204ENST00000537529 RNF183Q96D59 192 aa10.97□□□□□ -0.65
MKS1-204ENST00000537529 NOTCH3Q9UM47 2321 aa10.96□□□□□ -0.65
MKS1-204ENST00000537529 IGHV4-28A0A0C4DH34 117 aa10.96□□□□□ -0.65
MKS1-204ENST00000537529 VPS25Q9BRG1 176 aa10.96□□□□□ -0.65
MKS1-204ENST00000537529 IGLV4-60A0A075B6I1 120 aa10.96□□□□□ -0.66
MKS1-204ENST00000537529 SCGB1C2P0DMR2 95 aa10.96□□□□□ -0.66
MKS1-204ENST00000537529 G3V4G9 280 aa10.95□□□□□ -0.66
MKS1-204ENST00000537529 PAX4O43316 350 aa10.95□□□□□ -0.66
MKS1-204ENST00000537529 HERV-K104P63124 156 aa10.95□□□□□ -0.66
MKS1-204ENST00000537529 Q1RN00 199 aa10.95□□□□□ -0.66
MKS1-204ENST00000537529 H7C2G1 150 aa10.94□□□□□ -0.66
MKS1-204ENST00000537529 MIFP14174 115 aa10.94□□□□□ -0.66
MKS1-204ENST00000537529 PRIMA1Q86XR5 153 aa10.94□□□□□ -0.66
MKS1-204ENST00000537529 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
MKS1-204ENST00000537529 IGKV3OR2-268A0A0C4DH90 116 aa10.94□□□□□ -0.66
MKS1-204ENST00000537529 TCL1BO95988 128 aa10.94□□□□□ -0.66
MKS1-204ENST00000537529 DAD1P61803 113 aa10.94□□□□□ -0.66
MKS1-204ENST00000537529 NPC2P61916 151 aa10.94□□□□□ -0.66
MKS1-204ENST00000537529 MTURNQ8N3F0 131 aa10.94□□□□□ -0.66
MKS1-204ENST00000537529 COPS9Q8WXC6 57 aa10.94□□□□□ -0.66
MKS1-204ENST00000537529 TEX48A0A1B0GUV7 120 aa10.93□□□□□ -0.66
MKS1-204ENST00000537529 DEFB4AO15263 64 aa10.93□□□□□ -0.66
MKS1-204ENST00000537529 MEIG1Q5JSS6 88 aa10.92□□□□□ -0.66
MKS1-204ENST00000537529 DAND5Q8N907 189 aa10.92□□□□□ -0.66
MKS1-204ENST00000537529 Q8NAQ8 132 aa10.92□□□□□ -0.66
MKS1-204ENST00000537529 IGHV4-30-4P0DP06 118 aa10.91□□□□□ -0.66
MKS1-204ENST00000537529 COX7B2Q8TF08 81 aa10.91□□□□□ -0.66
MKS1-204ENST00000537529 HIVEP1P15822 2718 aa10.91□□□□□ -0.66
MKS1-204ENST00000537529 ETDBQ3ZM63 59 aa10.91□□□□□ -0.66
MKS1-204ENST00000537529 LINC00308Q8TCZ7 52 aa10.91□□□□□ -0.66
MKS1-204ENST00000537529 A0A1B0GUV1 79 aa10.9□□□□□ -0.66
MKS1-204ENST00000537529 TMEM262E9PQX1 116 aa10.9□□□□□ -0.66
MKS1-204ENST00000537529 IGHV3OR16-9A0A0B4J2B5 98 aa10.89□□□□□ -0.67
MKS1-204ENST00000537529 TRBV30A0A0K0K1B3 111 aa10.89□□□□□ -0.67
MKS1-204ENST00000537529 J3QR89 54 aa10.89□□□□□ -0.67
MKS1-204ENST00000537529 ATP5G1P05496 136 aa10.89□□□□□ -0.67
MKS1-204ENST00000537529 SH2D6Q7Z4S9 175 aa10.89□□□□□ -0.67
MKS1-204ENST00000537529 LINC00959A0A1B0GUT2 108 aa10.89□□□□□ -0.67
MKS1-204ENST00000537529 SPART-AS1P0CW21 52 aa10.89□□□□□ -0.67
MKS1-204ENST00000537529 A0A096LPF7 62 aa10.88□□□□□ -0.67
MKS1-204ENST00000537529 CELA1Q9UNI1 258 aa10.88□□□□□ -0.67
MKS1-204ENST00000537529 A0A087WZ39 114 aa10.88□□□□□ -0.67
MKS1-204ENST00000537529 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
MKS1-204ENST00000537529 ICOSQ9Y6W8 199 aa10.88□□□□□ -0.67
MKS1-204ENST00000537529 A0A0U1RRA0 63 aa10.87□□□□□ -0.67
MKS1-204ENST00000537529 TRIAP1O43715 76 aa10.87□□□□□ -0.67
MKS1-204ENST00000537529 RPL13AP40429 203 aaKnown RBP10.87□□□□□ -0.67
MKS1-204ENST00000537529 SS18Q15532 418 aa10.87□□□□□ -0.67
MKS1-204ENST00000537529 TRAV26-1A0A087WT03 109 aa10.86□□□□□ -0.67
MKS1-204ENST00000537529 ATXN8Q156A1 80 aa10.86□□□□□ -0.67
MKS1-204ENST00000537529 PPDPFQ9H3Y8 114 aa10.86□□□□□ -0.67
MKS1-204ENST00000537529 TOMM7Q9P0U1 55 aa10.86□□□□□ -0.67
MKS1-204ENST00000537529 COX6CP09669 75 aa10.85□□□□□ -0.67
MKS1-204ENST00000537529 C5orf38Q86SI9 138 aa10.85□□□□□ -0.67
MKS1-204ENST00000537529 SOSTDC1Q6X4U4 206 aa10.84□□□□□ -0.67
MKS1-204ENST00000537529 KRTAP24-1Q3LI83 254 aa10.83□□□□□ -0.68
MKS1-204ENST00000537529 VWFP04275 2813 aa10.83□□□□□ -0.68
MKS1-204ENST00000537529 XCL1P47992 114 aa10.83□□□□□ -0.68
MKS1-204ENST00000537529 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
MKS1-204ENST00000537529 C9JAW5 83 aa10.82□□□□□ -0.68
MKS1-204ENST00000537529 M0QXV9 152 aa10.82□□□□□ -0.68
MKS1-204ENST00000537529 HTN3P15516 51 aa10.82□□□□□ -0.68
MKS1-204ENST00000537529 TENM1Q9UKZ4 2725 aa10.82□□□□□ -0.68
MKS1-204ENST00000537529 LINC01620Q4KN68 170 aa10.81□□□□□ -0.68
MKS1-204ENST00000537529 OXLD1Q5BKU9 147 aa10.81□□□□□ -0.68
MKS1-204ENST00000537529 CLPSL2Q6UWE3 100 aa10.81□□□□□ -0.68
MKS1-204ENST00000537529 TEN1Q86WV5 123 aa10.81□□□□□ -0.68
MKS1-204ENST00000537529 LINC01561Q8N1V8 128 aa10.81□□□□□ -0.68
MKS1-204ENST00000537529 SLC25A20O43772 301 aa10.81□□□□□ -0.68
MKS1-204ENST00000537529 IBA57-AS1B1ANH7 110 aa10.8□□□□□ -0.68
MKS1-204ENST00000537529 KRTAP10-11P60412 298 aa10.8□□□□□ -0.68
MKS1-204ENST00000537529 FOXI1Q12951 378 aa10.8□□□□□ -0.68
MKS1-204ENST00000537529 C3orf56Q8N813 242 aa10.8□□□□□ -0.68
MKS1-204ENST00000537529 TEP1Q99973 2627 aaKnown RBP10.8□□□□□ -0.68
MKS1-204ENST00000537529 SHISA2Q6UWI4 295 aa10.79□□□□□ -0.68
MKS1-204ENST00000537529 LINC00269Q8N2A0 174 aa10.79□□□□□ -0.68
MKS1-204ENST00000537529 MIR7-3HGQ8N6C7 128 aa10.79□□□□□ -0.68
MKS1-204ENST00000537529 PPDPFLQ8WWR9 84 aa10.79□□□□□ -0.68
MKS1-204ENST00000537529 ANGP03950 147 aaKnown RBP10.78□□□□□ -0.68
MKS1-204ENST00000537529 LINC00158P58513 81 aa10.78□□□□□ -0.68
MKS1-204ENST00000537529 EGFEM1PQ0D2K5 195 aa10.78□□□□□ -0.68
MKS1-204ENST00000537529 C6orf226Q5I0X4 101 aa10.78□□□□□ -0.68
MKS1-204ENST00000537529 LELP1Q5T871 98 aa10.78□□□□□ -0.68
MKS1-204ENST00000537529 Q8IZM0 81 aa10.78□□□□□ -0.68
MKS1-204ENST00000537529 ANKRD29Q8N6D5 301 aa10.78□□□□□ -0.68
MKS1-204ENST00000537529 ATRQ13535 2644 aa10.78□□□□□ -0.68
MKS1-204ENST00000537529 PCP4P48539 62 aa10.77□□□□□ -0.69
MKS1-204ENST00000537529 CD164L2Q6UWJ8 174 aa10.77□□□□□ -0.69
MKS1-204ENST00000537529 TRBV10-2A0A0K0K1G8 114 aa10.76□□□□□ -0.69
MKS1-204ENST00000537529 REG3AQ06141 175 aa10.76□□□□□ -0.69
MKS1-204ENST00000537529 LST1O00453 97 aa10.75□□□□□ -0.69
MKS1-204ENST00000537529 COX7A2LO14548 114 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms