RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
PTPN21-202ENST00000536337 PYGO1Q9Y3Y4 419 aa9.38□□□□□ -0.91
PTPN21-202ENST00000536337 RNF152Q8N8N0 203 aa9.38□□□□□ -0.91
PTPN21-202ENST00000536337 ATRQ13535 2644 aa9.38□□□□□ -0.91
PTPN21-202ENST00000536337 GCN1Q92616 2671 aaKnown RBP9.38□□□□□ -0.91
PTPN21-202ENST00000536337 TRAV4A0A0B4J268 109 aa9.37□□□□□ -0.91
PTPN21-202ENST00000536337 COX7B2Q8TF08 81 aa9.37□□□□□ -0.91
PTPN21-202ENST00000536337 CHCHD7Q9BUK0 85 aa9.37□□□□□ -0.91
PTPN21-202ENST00000536337 CUBNO60494 3623 aa9.36□□□□□ -0.91
PTPN21-202ENST00000536337 SPENQ96T58 3664 aaKnown RBP9.36□□□□□ -0.91
PTPN21-202ENST00000536337 TRAV13-2A0A0B4J235 113 aa9.36□□□□□ -0.91
PTPN21-202ENST00000536337 HERV-K104P63124 156 aa9.36□□□□□ -0.91
PTPN21-202ENST00000536337 EDA2RQ9HAV5 297 aa9.36□□□□□ -0.91
PTPN21-202ENST00000536337 C16orf74Q96GX8 76 aa9.36□□□□□ -0.91
PTPN21-202ENST00000536337 PRO0461Q9UI25 63 aa9.36□□□□□ -0.91
PTPN21-202ENST00000536337 LINC00242Q5T6M2 205 aa9.35□□□□□ -0.91
PTPN21-202ENST00000536337 TRBV30A0A0K0K1B3 111 aa9.35□□□□□ -0.91
PTPN21-202ENST00000536337 DAD1P61803 113 aa9.35□□□□□ -0.91
PTPN21-202ENST00000536337 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
PTPN21-202ENST00000536337 LAMTOR3Q9UHA4 124 aa9.35□□□□□ -0.91
PTPN21-202ENST00000536337 LECT2O14960 151 aa9.34□□□□□ -0.91
PTPN21-202ENST00000536337 NF1P21359 2839 aa9.34□□□□□ -0.91
PTPN21-202ENST00000536337 H7C423 109 aa9.34□□□□□ -0.91
PTPN21-202ENST00000536337 C1orf158Q8N1D5 194 aa9.34□□□□□ -0.91
PTPN21-202ENST00000536337 BBC3Q96PG8 261 aaPredicted RBP9.34□□□□□ -0.91
PTPN21-202ENST00000536337 TRBV10-1A0A0K0K1A3 114 aa9.33□□□□□ -0.92
PTPN21-202ENST00000536337 H3BT86 120 aa9.33□□□□□ -0.92
PTPN21-202ENST00000536337 HELZ2Q9BYK8 2649 aaKnown RBP9.33□□□□□ -0.92
PTPN21-202ENST00000536337 IGKV3D-7A0A0C4DH55 119 aa9.33□□□□□ -0.92
PTPN21-202ENST00000536337 BRI3O95415 125 aa9.33□□□□□ -0.92
PTPN21-202ENST00000536337 SLPIP03973 132 aa9.33□□□□□ -0.92
PTPN21-202ENST00000536337 ZNF843Q8N446 348 aa9.33□□□□□ -0.92
PTPN21-202ENST00000536337 FAM236AA0A1B0GUQ0 79 aa9.32□□□□□ -0.92
PTPN21-202ENST00000536337 FAM236BA0A1B0GV22 79 aa9.32□□□□□ -0.92
PTPN21-202ENST00000536337 NDUFA1O15239 70 aa9.32□□□□□ -0.92
PTPN21-202ENST00000536337 INAFM2P0DMQ5 153 aa9.32□□□□□ -0.92
PTPN21-202ENST00000536337 LINC00482Q8N8I6 264 aa9.32□□□□□ -0.92
PTPN21-202ENST00000536337 AMELXQ99217 191 aa9.32□□□□□ -0.92
PTPN21-202ENST00000536337 CDIP1Q9H305 208 aa9.32□□□□□ -0.92
PTPN21-202ENST00000536337 F8P00451 2351 aa9.32□□□□□ -0.92
PTPN21-202ENST00000536337 TRAV25A0A0B4J276 109 aa9.31□□□□□ -0.92
PTPN21-202ENST00000536337 LINC01006Q8NI28 216 aa9.31□□□□□ -0.92
PTPN21-202ENST00000536337 TIRAPP58753 221 aa9.31□□□□□ -0.92
PTPN21-202ENST00000536337 FBN2P35556 2912 aa9.31□□□□□ -0.92
PTPN21-202ENST00000536337 C9orf153Q5TBE3 101 aa9.3□□□□□ -0.92
PTPN21-202ENST00000536337 COX7A2LO14548 114 aa9.3□□□□□ -0.92
PTPN21-202ENST00000536337 C14orf132Q9NPU4 83 aa9.3□□□□□ -0.92
PTPN21-202ENST00000536337 NDUFV3P56181 108 aaKnown RBP9.3□□□□□ -0.92
PTPN21-202ENST00000536337 KLK9Q2XQG4 91 aa9.29□□□□□ -0.92
PTPN21-202ENST00000536337 LINC00526Q96FQ7 95 aa9.29□□□□□ -0.92
PTPN21-202ENST00000536337 SMR3AQ99954 134 aa9.29□□□□□ -0.92
PTPN21-202ENST00000536337 CDC42SE2Q9NRR3 84 aa9.29□□□□□ -0.92
PTPN21-202ENST00000536337 LST1O00453 97 aa9.28□□□□□ -0.92
PTPN21-202ENST00000536337 SPANXDQ9BXN6 97 aa9.28□□□□□ -0.92
PTPN21-202ENST00000536337 SPANXCQ9NY87 97 aa9.28□□□□□ -0.92
PTPN21-202ENST00000536337 SMIM1B2RUZ4 78 aa9.28□□□□□ -0.92
PTPN21-202ENST00000536337 LINC00269Q8N2A0 174 aa9.28□□□□□ -0.92
PTPN21-202ENST00000536337 IGLV4-60A0A075B6I1 120 aa9.27□□□□□ -0.93
PTPN21-202ENST00000536337 TRBV6-8A0A0A6YYG3 113 aa9.27□□□□□ -0.93
PTPN21-202ENST00000536337 EIF4EBP3O60516 100 aaPredicted RBP9.27□□□□□ -0.93
PTPN21-202ENST00000536337 FAM222AQ5U5X8 452 aa9.26□□□□□ -0.93
PTPN21-202ENST00000536337 C11orf72Q8NBR9 251 aa9.26□□□□□ -0.93
PTPN21-202ENST00000536337 NCR3O14931 201 aa9.25□□□□□ -0.93
PTPN21-202ENST00000536337 OVOL2Q9BRP0 275 aa9.25□□□□□ -0.93
PTPN21-202ENST00000536337 KLK12Q9UKR0 248 aa9.25□□□□□ -0.93
PTPN21-202ENST00000536337 HAMPP81172 84 aa9.24□□□□□ -0.93
PTPN21-202ENST00000536337 Q8N2B8 174 aa9.24□□□□□ -0.93
PTPN21-202ENST00000536337 J3QKU1 62 aa9.24□□□□□ -0.93
PTPN21-202ENST00000536337 NTM-AS1Q6ZSK4 140 aa9.24□□□□□ -0.93
PTPN21-202ENST00000536337 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.24□□□□□ -0.93
PTPN21-202ENST00000536337 UBR5O95071 2799 aaPredicted RBP9.24□□□□□ -0.93
PTPN21-202ENST00000536337 CCDC179H3BU77 68 aa9.24□□□□□ -0.93
PTPN21-202ENST00000536337 PRR3P79522 188 aaKnown RBP9.24□□□□□ -0.93
PTPN21-202ENST00000536337 PRO0255Q9UI72 69 aa9.23□□□□□ -0.93
PTPN21-202ENST00000536337 ORMDL1Q9P0S3 153 aa9.23□□□□□ -0.93
PTPN21-202ENST00000536337 CELSR2Q9HCU4 2923 aa9.23□□□□□ -0.93
PTPN21-202ENST00000536337 SDIM1Q6ZPB5 146 aa9.23□□□□□ -0.93
PTPN21-202ENST00000536337 TRBV6-4A0A1B0GX49 114 aa9.22□□□□□ -0.93
PTPN21-202ENST00000536337 ZNF561-AS1K7EIQ3 104 aa9.22□□□□□ -0.93
PTPN21-202ENST00000536337 FHL3Q13643 280 aa9.22□□□□□ -0.93
PTPN21-202ENST00000536337 H0YGX0 51 aa9.22□□□□□ -0.93
PTPN21-202ENST00000536337 BEAN1Q3B7T3 259 aa9.22□□□□□ -0.93
PTPN21-202ENST00000536337 SHISA2Q6UWI4 295 aa9.22□□□□□ -0.93
PTPN21-202ENST00000536337 SMIM11BQ8TCY0 68 aa9.21□□□□□ -0.93
PTPN21-202ENST00000536337 TIMM17BO60830 172 aa9.21□□□□□ -0.94
PTPN21-202ENST00000536337 CCL18P55774 89 aa9.21□□□□□ -0.94
PTPN21-202ENST00000536337 ACYP1P07311 99 aa9.2□□□□□ -0.94
PTPN21-202ENST00000536337 SETXQ7Z333 2677 aaKnown RBP9.2□□□□□ -0.94
PTPN21-202ENST00000536337 TEP1Q99973 2627 aaKnown RBP9.2□□□□□ -0.94
PTPN21-202ENST00000536337 LRRC75A-AS1Q8N1F1 130 aa9.2□□□□□ -0.94
PTPN21-202ENST00000536337 APOC4P55056 127 aa9.19□□□□□ -0.94
PTPN21-202ENST00000536337 C9orf116Q5BN46 136 aaPredicted RBP9.19□□□□□ -0.94
PTPN21-202ENST00000536337 LINC00959A0A1B0GUT2 108 aa9.19□□□□□ -0.94
PTPN21-202ENST00000536337 SOSTDC1Q6X4U4 206 aa9.18□□□□□ -0.94
PTPN21-202ENST00000536337 CHCHD10Q8WYQ3 142 aaPredicted RBP9.18□□□□□ -0.94
PTPN21-202ENST00000536337 MGAM2Q2M2H8 2515 aa9.18□□□□□ -0.94
PTPN21-202ENST00000536337 A0A1B0GX51 115 aa9.18□□□□□ -0.94
PTPN21-202ENST00000536337 RPL18AQ02543 176 aaKnown RBP9.18□□□□□ -0.94
PTPN21-202ENST00000536337 XAGE1AQ9HD64 81 aa9.18□□□□□ -0.94
PTPN21-202ENST00000536337 ITPR2Q14571 2701 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms