RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 FHITP49789 147 aa4.64□□□□□ -1.67
CLIP1-206ENST00000535290 CTAG1AP78358 180 aa4.64□□□□□ -1.67
CLIP1-206ENST00000535290 TMEM241Q24JQ0 296 aa4.64□□□□□ -1.67
CLIP1-206ENST00000535290 FAM229BQ4G0N7 80 aa4.64□□□□□ -1.67
CLIP1-206ENST00000535290 OR10D4PQ8NGN7 298 aa4.64□□□□□ -1.67
CLIP1-206ENST00000535290 ORAOV1Q8WV07 137 aa4.64□□□□□ -1.67
CLIP1-206ENST00000535290 TCEAL7Q9BRU2 100 aa4.64□□□□□ -1.67
CLIP1-206ENST00000535290 KRTAP3-1Q9BYR8 98 aa4.64□□□□□ -1.67
CLIP1-206ENST00000535290 IGKV2D-26A0A0A0MRZ7 120 aa4.63□□□□□ -1.67
CLIP1-206ENST00000535290 I3L3M4 83 aa4.63□□□□□ -1.67
CLIP1-206ENST00000535290 BCE1O60756 84 aa4.63□□□□□ -1.67
CLIP1-206ENST00000535290 PMCHP20382 165 aa4.63□□□□□ -1.67
CLIP1-206ENST00000535290 LYZL1Q6UWQ5 148 aa4.63□□□□□ -1.67
CLIP1-206ENST00000535290 MRAP2Q96G30 205 aa4.63□□□□□ -1.67
CLIP1-206ENST00000535290 TMEM242Q9NWH2 141 aa4.63□□□□□ -1.67
CLIP1-206ENST00000535290 C22orf24Q9Y442 160 aa4.63□□□□□ -1.67
CLIP1-206ENST00000535290 F2Z2F3 143 aa4.62□□□□□ -1.67
CLIP1-206ENST00000535290 F8WDY8 70 aa4.62□□□□□ -1.67
CLIP1-206ENST00000535290 M0R2T5 61 aa4.62□□□□□ -1.67
CLIP1-206ENST00000535290 S100A9P06702 114 aaKnown RBP4.62□□□□□ -1.67
CLIP1-206ENST00000535290 CTRLP40313 264 aa4.62□□□□□ -1.67
CLIP1-206ENST00000535290 FOXA3P55318 350 aaPredicted RBP4.62□□□□□ -1.67
CLIP1-206ENST00000535290 CCDC32Q9BV29 185 aa4.62□□□□□ -1.67
CLIP1-206ENST00000535290 RNASE7Q9H1E1 156 aaKnown RBP4.62□□□□□ -1.67
CLIP1-206ENST00000535290 MAP1LC3B2A6NCE7 125 aa4.61□□□□□ -1.67
CLIP1-206ENST00000535290 RPS20P60866 119 aaKnown RBP4.61□□□□□ -1.67
CLIP1-206ENST00000535290 MAP1LC3BQ9GZQ8 125 aa4.61□□□□□ -1.67
CLIP1-206ENST00000535290 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
CLIP1-206ENST00000535290 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
CLIP1-206ENST00000535290 NDUFC2-KCTD14E9PQ53 114 aa4.6□□□□□ -1.67
CLIP1-206ENST00000535290 TWIST1Q15672 202 aa4.6□□□□□ -1.67
CLIP1-206ENST00000535290 TMUB2Q71RG4 321 aa4.6□□□□□ -1.67
CLIP1-206ENST00000535290 C9orf62Q8N4C0 152 aa4.6□□□□□ -1.67
CLIP1-206ENST00000535290 C3orf22Q8N5N4 141 aa4.6□□□□□ -1.67
CLIP1-206ENST00000535290 IGHV3OR16-9A0A0B4J2B5 98 aa4.59□□□□□ -1.67
CLIP1-206ENST00000535290 C7orf77A4D0Y5 90 aa4.59□□□□□ -1.67
CLIP1-206ENST00000535290 IFNA1P01562 189 aa4.59□□□□□ -1.67
CLIP1-206ENST00000535290 KIAA0087Q14695 138 aa4.59□□□□□ -1.67
CLIP1-206ENST00000535290 LBHQ53QV2 105 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-206ENST00000535290 RPL7L1Q6DKI1 246 aaKnown RBP4.59□□□□□ -1.67
CLIP1-206ENST00000535290 C2orf82Q6UX34 121 aa4.59□□□□□ -1.67
CLIP1-206ENST00000535290 KRTAP13-1Q8IUC0 172 aa4.59□□□□□ -1.67
CLIP1-206ENST00000535290 CYTL1Q9NRR1 136 aa4.59□□□□□ -1.67
CLIP1-206ENST00000535290 TRBV6-5A0A0K0K1A5 114 aa4.58□□□□□ -1.68
CLIP1-206ENST00000535290 XKRY2A2RUG3 117 aa4.58□□□□□ -1.68
CLIP1-206ENST00000535290 SSNA1O43805 119 aa4.58□□□□□ -1.68
CLIP1-206ENST00000535290 RPL35P42766 123 aaKnown RBP4.58□□□□□ -1.68
CLIP1-206ENST00000535290 AKR1C8PQ5T2L2 129 aa4.58□□□□□ -1.68
CLIP1-206ENST00000535290 Q6ZUT4 128 aa4.58□□□□□ -1.68
CLIP1-206ENST00000535290 LINC00469Q8N7U9 141 aa4.58□□□□□ -1.68
CLIP1-206ENST00000535290 CNFNQ9BYD5 112 aa4.58□□□□□ -1.68
CLIP1-206ENST00000535290 XAGE1AQ9HD64 81 aa4.58□□□□□ -1.68
CLIP1-206ENST00000535290 UBE2D4Q9Y2X8 147 aa4.58□□□□□ -1.68
CLIP1-206ENST00000535290 CSDC2Q9Y534 153 aaKnown RBP4.58□□□□□ -1.68
CLIP1-206ENST00000535290 TRBV30A0A0K0K1B3 111 aa4.57□□□□□ -1.68
CLIP1-206ENST00000535290 RPL37AP8A6NKH3 93 aa4.57□□□□□ -1.68
CLIP1-206ENST00000535290 KRTAP4-16G5E9R7 235 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-206ENST00000535290 POLR2KP53803 58 aaKnown RBP4.57□□□□□ -1.68
CLIP1-206ENST00000535290 SPAG11AQ6PDA7 123 aa4.57□□□□□ -1.68
CLIP1-206ENST00000535290 TEX261Q6UWH6 196 aa4.57□□□□□ -1.68
CLIP1-206ENST00000535290 MRPL55Q7Z7F7 128 aaKnown RBP4.57□□□□□ -1.68
CLIP1-206ENST00000535290 PACRGQ96M98 296 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-206ENST00000535290 A0A1B0GVG6 124 aa4.56□□□□□ -1.68
CLIP1-206ENST00000535290 VCYO14598 125 aa4.56□□□□□ -1.68
CLIP1-206ENST00000535290 UPK1BO75841 260 aa4.56□□□□□ -1.68
CLIP1-206ENST00000535290 UBE2AP49459 152 aa4.56□□□□□ -1.68
CLIP1-206ENST00000535290 MARVELD1Q9BSK0 173 aa4.56□□□□□ -1.68
CLIP1-206ENST00000535290 ST20Q9HBF5 79 aa4.56□□□□□ -1.68
CLIP1-206ENST00000535290 IGLV8-61A0A075B6I0 122 aa4.55□□□□□ -1.68
CLIP1-206ENST00000535290 TRBV27A0A0K0K1C4 114 aa4.55□□□□□ -1.68
CLIP1-206ENST00000535290 A0A1B0GV50 99 aa4.55□□□□□ -1.68
CLIP1-206ENST00000535290 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
CLIP1-206ENST00000535290 TAGLN2P37802 199 aaKnown RBP4.55□□□□□ -1.68
CLIP1-206ENST00000535290 CENPWQ5EE01 88 aa4.55□□□□□ -1.68
CLIP1-206ENST00000535290 DAND5Q8N907 189 aa4.55□□□□□ -1.68
CLIP1-206ENST00000535290 ENKURQ8TC29 256 aa4.55□□□□□ -1.68
CLIP1-206ENST00000535290 FAM104AQ969W3 186 aa4.55□□□□□ -1.68
CLIP1-206ENST00000535290 LINC00167Q96N53 147 aa4.55□□□□□ -1.68
CLIP1-206ENST00000535290 TP73-AS1Q9UF72 201 aa4.55□□□□□ -1.68
CLIP1-206ENST00000535290 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
CLIP1-206ENST00000535290 PFDN1O60925 122 aa4.54□□□□□ -1.68
CLIP1-206ENST00000535290 PCOTHQ58A44 107 aa4.54□□□□□ -1.68
CLIP1-206ENST00000535290 TMEM18Q96B42 140 aa4.54□□□□□ -1.68
CLIP1-206ENST00000535290 BORCS7-ASMTA0A0B4J1R7 106 aa4.53□□□□□ -1.68
CLIP1-206ENST00000535290 RAB19A4D1S5 217 aa4.53□□□□□ -1.68
CLIP1-206ENST00000535290 S100A6P06703 90 aa4.53□□□□□ -1.68
CLIP1-206ENST00000535290 VPREB1P12018 145 aa4.53□□□□□ -1.68
CLIP1-206ENST00000535290 FCER1GP30273 86 aa4.53□□□□□ -1.68
CLIP1-206ENST00000535290 Q5BKY6 102 aa4.53□□□□□ -1.68
CLIP1-206ENST00000535290 SMIM15Q7Z3B0 74 aa4.53□□□□□ -1.68
CLIP1-206ENST00000535290 SFT2D1Q8WV19 159 aa4.53□□□□□ -1.68
CLIP1-206ENST00000535290 H0Y8G0 127 aa4.52□□□□□ -1.69
CLIP1-206ENST00000535290 PRLHP81277 87 aa4.52□□□□□ -1.69
CLIP1-206ENST00000535290 TIMM21Q9BVV7 248 aa4.52□□□□□ -1.69
CLIP1-206ENST00000535290 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
CLIP1-206ENST00000535290 RPL32P62910 135 aaKnown RBP4.51□□□□□ -1.69
CLIP1-206ENST00000535290 SMAGPQ0VAQ4 97 aa4.51□□□□□ -1.69
CLIP1-206ENST00000535290 KCNRGQ8N5I3 272 aa4.51□□□□□ -1.69
CLIP1-206ENST00000535290 Q8NBF4 154 aa4.51□□□□□ -1.69
CLIP1-206ENST00000535290 MBD3L1Q8WWY6 194 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms