RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 COX17Q14061 63 aa-0.29□□□□□ -2.46
BRCA2-205ENST00000533776 TSC2P49815 1807 aa-0.29□□□□□ -2.46
BRCA2-205ENST00000533776 CHD1O14646 1710 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 TCHHQ07283 1943 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 CC2D2AQ9P2K1 1620 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 DIP2CQ9Y2E4 1556 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 PIGBOS1A0A0B4J2F0 54 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 UBE2L5PA0A1B0GUS4 154 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 CORTO00230 105 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 SFT2D2O95562 160 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 IGLC1P0CG04 106 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 TPPP2P59282 170 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 UBE2D3P61077 147 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 UBE2D2P62837 147 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 UBE2L3P68036 154 aaKnown RBP-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 C9orf153Q5TBE3 101 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 FAM167A-AS1Q96KT0 104 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 C2orf88Q9BSF0 95 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 IER3IP1Q9Y5U9 82 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 ADGRL2O95490 1459 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 PZPP20742 1482 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 MRC2Q9UBG0 1479 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 PTPN13Q12923 2485 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 SCAPERQ9BY12 1400 aa-0.3□□□□□ -2.46
BRCA2-205ENST00000533776 COL6A3P12111 3177 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 CSPG4Q6UVK1 2322 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 NRKQ7Z2Y5 1582 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 ARHGEF12Q9NZN5 1544 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 TRBV6-1A0A0K0K1D8 114 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 LINC00959A0A1B0GUT2 108 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 CHKB-CPT1BH3BT56 60 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 SPRR1BP22528 89 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 C10orf113Q5VZT2 155 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 FAM223AQ8IWN6 122 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 MAGI1Q96QZ7 1491 aaPredicted RBP-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 SHANK2Q9UPX8 1470 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 TENM2Q9NT68 2774 aa-0.31□□□□□ -2.46
BRCA2-205ENST00000533776 KTN1Q86UP2 1357 aaKnown RBP-0.32□□□□□ -2.46
BRCA2-205ENST00000533776 ATRQ13535 2644 aa-0.32□□□□□ -2.46
BRCA2-205ENST00000533776 IFNGP01579 166 aa-0.32□□□□□ -2.46
BRCA2-205ENST00000533776 Q0VG73 95 aa-0.32□□□□□ -2.46
BRCA2-205ENST00000533776 TMEM263Q8WUH6 116 aaKnown RBP-0.32□□□□□ -2.46
BRCA2-205ENST00000533776 LCN9Q8WX39 176 aa-0.32□□□□□ -2.46
BRCA2-205ENST00000533776 NXT2Q9NPJ8 142 aaKnown RBP-0.32□□□□□ -2.46
BRCA2-205ENST00000533776 NUP188Q5SRE5 1749 aa-0.33□□□□□ -2.46
BRCA2-205ENST00000533776 KIAA0556O60303 1618 aa-0.33□□□□□ -2.46
BRCA2-205ENST00000533776 TOP2BQ02880 1626 aa-0.33□□□□□ -2.46
BRCA2-205ENST00000533776 RYR3Q15413 4870 aa-0.33□□□□□ -2.46
BRCA2-205ENST00000533776 LOC285095A0A1B0GVY8 99 aa-0.33□□□□□ -2.46
BRCA2-205ENST00000533776 APOC3P02656 99 aa-0.33□□□□□ -2.46
BRCA2-205ENST00000533776 NCOA3Q9Y6Q9 1424 aa-0.33□□□□□ -2.46
BRCA2-205ENST00000533776 ARHGAP5Q13017 1502 aa-0.33□□□□□ -2.46
BRCA2-205ENST00000533776 LRP1BQ9NZR2 4599 aa-0.33□□□□□ -2.46
BRCA2-205ENST00000533776 TOPAZ1Q8N9V7 1692 aa-0.33□□□□□ -2.46
BRCA2-205ENST00000533776 GAPVD1Q14C86 1478 aa-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 C1orf167Q5SNV9 1468 aa-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 F6UZH7 168 aa-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 K7EQZ3 153 aa-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 EIF4G3O43432 1585 aaKnown RBP-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 SNAPC5O75971 98 aa-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 MGPP08493 103 aa-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 SPRR2BP35325 72 aa-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 GNG4P50150 75 aa-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 ATP5EP56381 51 aaPredicted RBP-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 DCDP81605 110 aaKnown RBP-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 ARL2-SNX15V9GYD0 113 aa-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 GOLGA4Q13439 2230 aaKnown RBP-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 PAPPA2Q9BXP8 1791 aa-0.34□□□□□ -2.46
BRCA2-205ENST00000533776 ABCA3Q99758 1704 aa-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 FAM223BA6NKX1 122 aa-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 COX6B1P14854 86 aa-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 GNG11P61952 73 aa-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 PPP3R1P63098 170 aa-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 PIGYQ3MUY2 71 aa-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 LINC01600Q96MT4 127 aa-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 MAPKBP1O60336 1514 aa-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 WDR7Q9Y4E6 1490 aa-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 XRN1Q8IZH2 1706 aaKnown RBP-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 MARF1Q9Y4F3 1742 aaKnown RBP-0.35□□□□□ -2.47
BRCA2-205ENST00000533776 EP300Q09472 2414 aaPredicted RBP-0.36□□□□□ -2.47
BRCA2-205ENST00000533776 ABCC5O15440 1437 aa-0.36□□□□□ -2.47
BRCA2-205ENST00000533776 ZFYVE16Q7Z3T8 1539 aa-0.36□□□□□ -2.47
BRCA2-205ENST00000533776 FXYD6-FXYD2A0A087WZ82 144 aa-0.36□□□□□ -2.47
BRCA2-205ENST00000533776 FAM24AA6NFZ4 105 aa-0.36□□□□□ -2.47
BRCA2-205ENST00000533776 SFTA2Q6UW10 78 aa-0.36□□□□□ -2.47
BRCA2-205ENST00000533776 FMN2Q9NZ56 1722 aa-0.36□□□□□ -2.47
BRCA2-205ENST00000533776 WNK1Q9H4A3 2382 aa-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 MAP1BP46821 2468 aaKnown RBP-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 FLGP20930 4061 aaPredicted RBP-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 HERC1Q15751 4861 aa-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 SETXQ7Z333 2677 aaKnown RBP-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 SVEP1Q4LDE5 3571 aa-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 SLIT1O75093 1534 aa-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 PKHD1P08F94 4074 aa-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 TRBV7-4A0A0J9YYF1 115 aa-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 S100A3P33764 101 aa-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 MANBALQ9NQG1 85 aa-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 UQCR10Q9UDW1 63 aa-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 MAP1AP78559 2803 aaPredicted RBP-0.37□□□□□ -2.47
BRCA2-205ENST00000533776 POLA1P09884 1462 aaPredicted RBP-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms