RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 PCDH15Q96QU1 1955 aa5.14□□□□□ -1.59
CTNND1-236ENST00000533667 UBE2D3P61077 147 aa5.14□□□□□ -1.59
CTNND1-236ENST00000533667 UBE2D2P62837 147 aa5.14□□□□□ -1.59
CTNND1-236ENST00000533667 BBC3Q96PG8 261 aaPredicted RBP5.14□□□□□ -1.59
CTNND1-236ENST00000533667 XAGE1AQ9HD64 81 aa5.14□□□□□ -1.59
CTNND1-236ENST00000533667 BCE1O60756 84 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 SNURFQ9Y675 71 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 PCNX3Q9H6A9 2034 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 A0A087WZ39 114 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 Q6ZQY7 126 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 BRCA2P51587 3418 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 EDN2P20800 178 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 BEAN1Q3B7T3 259 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 SOSTDC1Q6X4U4 206 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 CDC42SE2Q9NRR3 84 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 ZNF580Q9UK33 172 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 KIAA1549Q9HCM3 1950 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 ESRGQ1W209 222 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 SMIM11BQ8TCY0 68 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 CHCHD7Q9BUK0 85 aa5.13□□□□□ -1.59
CTNND1-236ENST00000533667 TTC28Q96AY4 2481 aa5.12□□□□□ -1.59
CTNND1-236ENST00000533667 K7ERS5 55 aa5.12□□□□□ -1.59
CTNND1-236ENST00000533667 C10orf99Q6UWK7 81 aa5.12□□□□□ -1.59
CTNND1-236ENST00000533667 LINC01006Q8NI28 216 aa5.12□□□□□ -1.59
CTNND1-236ENST00000533667 SPG11Q96JI7 2443 aa5.12□□□□□ -1.59
CTNND1-236ENST00000533667 DSCAMO60469 2012 aa5.12□□□□□ -1.59
CTNND1-236ENST00000533667 LINC00310P59036 64 aa5.12□□□□□ -1.59
CTNND1-236ENST00000533667 Q6ZS46 218 aa5.12□□□□□ -1.59
CTNND1-236ENST00000533667 DSCAML1Q8TD84 2053 aa5.11□□□□□ -1.59
CTNND1-236ENST00000533667 WNK1Q9H4A3 2382 aa5.11□□□□□ -1.59
CTNND1-236ENST00000533667 SCXQ7RTU7 201 aa5.11□□□□□ -1.59
CTNND1-236ENST00000533667 C1orf158Q8N1D5 194 aa5.11□□□□□ -1.59
CTNND1-236ENST00000533667 A8MZ25 164 aa5.11□□□□□ -1.59
CTNND1-236ENST00000533667 ZNF73O43830 326 aaPredicted RBP5.11□□□□□ -1.59
CTNND1-236ENST00000533667 NANOS2P60321 138 aaKnown RBP5.11□□□□□ -1.59
CTNND1-236ENST00000533667 KPRPQ5T749 579 aaPredicted RBP5.11□□□□□ -1.59
CTNND1-236ENST00000533667 LINC00482Q8N8I6 264 aa5.11□□□□□ -1.59
CTNND1-236ENST00000533667 ATG2AQ2TAZ0 1938 aa5.11□□□□□ -1.59
CTNND1-236ENST00000533667 HCFC1P51610 2035 aa5.11□□□□□ -1.59
CTNND1-236ENST00000533667 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.11□□□□□ -1.59
CTNND1-236ENST00000533667 URB1-AS1Q96HZ7 61 aa5.11□□□□□ -1.59
CTNND1-236ENST00000533667 POM121L12Q8N7R1 296 aa5.1□□□□□ -1.59
CTNND1-236ENST00000533667 INAFM1C9JVW0 142 aa5.1□□□□□ -1.59
CTNND1-236ENST00000533667 C7orf33Q8WU49 177 aa5.1□□□□□ -1.59
CTNND1-236ENST00000533667 PRR14LQ5THK1 2151 aa5.1□□□□□ -1.59
CTNND1-236ENST00000533667 RPL28P46779 137 aaKnown RBP5.1□□□□□ -1.59
CTNND1-236ENST00000533667 LINC00242Q5T6M2 205 aa5.1□□□□□ -1.59
CTNND1-236ENST00000533667 LINC00474Q9P2X8 69 aa5.1□□□□□ -1.59
CTNND1-236ENST00000533667 GAS8-AS1O95177 125 aa5.09□□□□□ -1.59
CTNND1-236ENST00000533667 LIMD2Q9BT23 127 aa5.09□□□□□ -1.59
CTNND1-236ENST00000533667 EGFEM1PQ0D2K5 195 aa5.09□□□□□ -1.6
CTNND1-236ENST00000533667 WFDC10BQ8IUB3 73 aa5.09□□□□□ -1.6
CTNND1-236ENST00000533667 BDP1A6H8Y1 2624 aa5.09□□□□□ -1.6
CTNND1-236ENST00000533667 PLXNB1O43157 2135 aa5.09□□□□□ -1.6
CTNND1-236ENST00000533667 C3orf84H3BNL1 204 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 ZNF843Q8N446 348 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 LOC100131303A0A0U1RQF7 123 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 SMIM1B2RUZ4 78 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 PRYO14603 147 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 NTM-AS1Q6ZSK4 140 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 A0A096LNI7 61 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 CEP192Q8TEP8 1941 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 IGKV2-28A0A075B6P5 120 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 IGKV2D-28P01615 120 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 AMELXQ99217 191 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 LRP4O75096 1905 aa5.08□□□□□ -1.6
CTNND1-236ENST00000533667 CSPG4Q6UVK1 2322 aa5.07□□□□□ -1.6
CTNND1-236ENST00000533667 NAV3Q8IVL0 2385 aa5.07□□□□□ -1.6
CTNND1-236ENST00000533667 TRBV10-3A0A0K0K1G6 114 aa5.07□□□□□ -1.6
CTNND1-236ENST00000533667 CYSRT1A8MQ03 144 aa5.07□□□□□ -1.6
CTNND1-236ENST00000533667 LY6G6DO95868 133 aa5.07□□□□□ -1.6
CTNND1-236ENST00000533667 ODF3L2Q3SX64 289 aa5.07□□□□□ -1.6
CTNND1-236ENST00000533667 CUL9Q8IWT3 2517 aa5.07□□□□□ -1.6
CTNND1-236ENST00000533667 LINC01561Q8N1V8 128 aa5.06□□□□□ -1.6
CTNND1-236ENST00000533667 Q8N9L7 120 aa5.06□□□□□ -1.6
CTNND1-236ENST00000533667 Q8N814 137 aa5.06□□□□□ -1.6
CTNND1-236ENST00000533667 C18orf65Q6ZTR6 163 aa5.06□□□□□ -1.6
CTNND1-236ENST00000533667 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.06□□□□□ -1.6
CTNND1-236ENST00000533667 SORL1Q92673 2214 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 PSPHP1O15172 72 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 CENPFP49454 3210 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 IGLV1-51P01701 117 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 WFDC10AQ9H1F0 79 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 CELA1Q9UNI1 258 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 IGLV2-18A0A075B6J9 118 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 WFDC13Q8IUB5 93 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 HTTP42858 3142 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 OTOGLQ3ZCN5 2332 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 ATRXP46100 2492 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 NOTCH2Q04721 2471 aa5.05□□□□□ -1.6
CTNND1-236ENST00000533667 CACNA1AO00555 2505 aa5.04□□□□□ -1.6
CTNND1-236ENST00000533667 A0A096LNJ9 63 aa5.04□□□□□ -1.6
CTNND1-236ENST00000533667 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
CTNND1-236ENST00000533667 A0A1B0GUV1 79 aa5.04□□□□□ -1.6
CTNND1-236ENST00000533667 LINC00336Q6ZUF6 198 aa5.04□□□□□ -1.6
CTNND1-236ENST00000533667 TSPEAR-AS2P59090 65 aa5.03□□□□□ -1.6
CTNND1-236ENST00000533667 SBSPONQ8IVN8 264 aa5.03□□□□□ -1.6
CTNND1-236ENST00000533667 AVPP01185 164 aa5.03□□□□□ -1.6
CTNND1-236ENST00000533667 C10orf25Q5T742 122 aa5.03□□□□□ -1.6
CTNND1-236ENST00000533667 UNQ6190/PRO20217Q6UXQ8 127 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms