RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 RPS27LQ71UM5 84 aaKnown RBP1.81□□□□□ -2.12
CTR9-204ENST00000529355 SMCR5Q8TEV8 140 aa1.81□□□□□ -2.12
CTR9-204ENST00000529355 ESPL1Q14674 2120 aa1.81□□□□□ -2.12
CTR9-204ENST00000529355 DOCK10Q96BY6 2186 aa1.81□□□□□ -2.12
CTR9-204ENST00000529355 DIDO1Q9BTC0 2240 aaKnown RBP1.81□□□□□ -2.12
CTR9-204ENST00000529355 MUC22E2RYF6 1773 aaPredicted RBP1.8□□□□□ -2.12
CTR9-204ENST00000529355 IGKV2D-26A0A0A0MRZ7 120 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 TRAV22A0A0B4J277 110 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 HIGD1CA8MV81 97 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 TMEM14DPA8MWL7 114 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 F8VRH5 84 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 MSMBP08118 114 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 LYZL2Q7Z4W2 148 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 SPTSSBQ8NFR3 76 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 PFN4Q8NHR9 129 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 TMEM263Q8WUH6 116 aaKnown RBP1.8□□□□□ -2.12
CTR9-204ENST00000529355 RETNLBQ9BQ08 111 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 PSENENQ9NZ42 101 aa1.8□□□□□ -2.12
CTR9-204ENST00000529355 IGLV3-9A0A075B6K5 115 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 TRAV23DV6A0A075B6W5 121 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 TRBV6-8A0A0A6YYG3 113 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 IGKV1-12A0A0C4DH73 117 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 A0A0J9YX75 114 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 A0A1B0GUT8 65 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 C11orf86A6NJI1 115 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 A8MWP4 228 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 D6R8Y8 96 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 E7EUB6 86 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 K7EMI3 77 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 K7ERS5 55 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 SPINK4O60575 86 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 IGKV1D-12P01611 117 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 IGHV3-30P01768 117 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 CGB3P0DN86 165 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 CGB7P0DN87 165 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 IGHV3-30-5P0DP03 117 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 MUSTN1Q8IVN3 82 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 PROK2Q9HC23 129 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 U3KQK5 164 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 FREM1Q5H8C1 2179 aa1.79□□□□□ -2.12
CTR9-204ENST00000529355 TNRC6BQ9UPQ9 1833 aaKnown RBP1.78□□□□□ -2.12
CTR9-204ENST00000529355 SSC5DA1L4H1 1573 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 A0A0J9YY99 117 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 CPSF4LA6NMK7 179 aaKnown RBP1.78□□□□□ -2.12
CTR9-204ENST00000529355 C5orf67F2Z3F1 127 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 CHKB-CPT1BH3BT56 60 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 ARMS2P0C7Q2 107 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 SAA2P0DJI9 122 aaPredicted RBP1.78□□□□□ -2.12
CTR9-204ENST00000529355 ARL14EPLP0DKL9 152 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 HMGA1P17096 107 aaKnown RBP1.78□□□□□ -2.12
CTR9-204ENST00000529355 SPINT3P49223 89 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 TSPEAR-AS2P59090 65 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 ELOF1P60002 83 aaKnown RBP1.78□□□□□ -2.12
CTR9-204ENST00000529355 FXYD3Q14802 87 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 FAM74A4Q5TZK3 123 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 GDF5OSQ5U4N7 250 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 LYPD6Q86Y78 171 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 TMEM254Q8TBM7 123 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 B9D2Q9BPU9 175 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 UBL5Q9BZL1 73 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 BPESC1Q9GZL8 116 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 TMEM14BQ9NUH8 114 aa1.78□□□□□ -2.12
CTR9-204ENST00000529355 TIMM8BQ9Y5J9 83 aaPredicted RBP1.78□□□□□ -2.12
CTR9-204ENST00000529355 DNAJC13O75165 2243 aa1.78□□□□□ -2.13
CTR9-204ENST00000529355 MED13Q9UHV7 2174 aa1.78□□□□□ -2.13
CTR9-204ENST00000529355 CR1P17927 2039 aa1.78□□□□□ -2.13
CTR9-204ENST00000529355 COL4A1P02462 1669 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 IGHV3-43A0A0B4J1X8 118 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 IGKV3D-7A0A0C4DH55 119 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 TRBV7-4A0A0J9YYF1 115 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 LOC101927531A0A1B0GV80 90 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 A0A1W2PNM2 257 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 A6NED7 52 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 NDUFB1O75438 58 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 IGHV1-69P01742 117 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 IGHV3-30-3P0DP02 117 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 COX6B1P14854 86 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 MIAQ16674 131 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 FAM229BQ4G0N7 80 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 C10orf128Q5T292 105 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 Q5VV11 94 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 SFTA2Q6UW10 78 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 Q8N814 137 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 CNEP1R1Q8N9A8 125 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 LHFPL6Q9Y693 200 aa1.77□□□□□ -2.13
CTR9-204ENST00000529355 IGHV3-21A0A0B4J1V1 117 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 TRBV6-1A0A0K0K1D8 114 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 LOC730098B7Z3J9 87 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 JMJD7-PLA2G4BH0Y9G9 81 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 M0R135 149 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 PSCAO43653 123 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 BAALC-AS2P0C853 105 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 CCL3P10147 92 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 CCL5P13501 91 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 IL9P15248 144 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 SPANXN5Q5MJ07 72 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 ZFAND2AQ8N6M9 145 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 TTTY13Q9BZ97 58 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 C14orf132Q9NPU4 83 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 CDC42SE2Q9NRR3 84 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms