RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ZFP82Q8N141 532 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 OR2T35Q8NGX2 323 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 SAMD10Q9BYL1 202 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 A0A0J9YXV3 536 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 TINCRA0A1B0GVN0 87 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 HMGB3O15347 200 aaKnown RBP2.74□□□□□ -1.97
CSDE1-212ENST00000529046 SH2D1AO60880 128 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 IFNA7P01567 189 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 GZMBP10144 247 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 TPT1P13693 172 aaKnown RBP2.74□□□□□ -1.97
CSDE1-212ENST00000529046 RPL19P84098 196 aaKnown RBP2.74□□□□□ -1.97
CSDE1-212ENST00000529046 CIRBPQ14011 172 aaKnown RBP2.74□□□□□ -1.97
CSDE1-212ENST00000529046 MIAQ16674 131 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 ENHOQ6UWT2 76 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 Q86TA4 180 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 C9orf163Q8N9P6 203 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.74□□□□□ -1.97
CSDE1-212ENST00000529046 CIRBP-AS1Q8TBR5 109 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 ZC2HC1AQ96GY0 325 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 PACRGQ96M98 296 aaPredicted RBP2.74□□□□□ -1.97
CSDE1-212ENST00000529046 BATF3Q9NR55 127 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 PHLDA3Q9Y5J5 127 aa2.74□□□□□ -1.97
CSDE1-212ENST00000529046 FLG2Q5D862 2391 aaPredicted RBP2.74□□□□□ -1.97
CSDE1-212ENST00000529046 IGKV2D-24A0A075B6R9 120 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 UMAD1C9J7I0 102 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 H3BVH4 76 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 UBE2G1P62253 170 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 HAMPP81172 84 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 Q5BKY6 102 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 AKR1C8PQ5T2L2 129 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 RPL7L1Q6DKI1 246 aaKnown RBP2.73□□□□□ -1.97
CSDE1-212ENST00000529046 SDIM1Q6ZPB5 146 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 Q6ZRU5 148 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 STOML3Q8TAV4 291 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 MBD3L1Q8WWY6 194 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 UBE2WQ96B02 151 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 DNAJC30Q96LL9 226 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 MED28Q9H204 178 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 ALG5Q9Y673 324 aa2.73□□□□□ -1.97
CSDE1-212ENST00000529046 UBR4Q5T4S7 5183 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 SMIM26A0A096LP01 95 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 A0A0D9SG52 128 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 CXCL5P42830 114 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 CNBPP62633 177 aaKnown RBP2.72□□□□□ -1.97
CSDE1-212ENST00000529046 ZNF345Q14585 488 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 C4orf26Q17RF5 130 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 IQCJQ1A5X6 159 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 FAM74A4Q5TZK3 123 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 KRTAP26-1Q6PEX3 210 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 FAM19A5Q7Z5A7 132 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-212ENST00000529046 C15orf56Q8N910 161 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 SMIM12Q96EX1 92 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 ZNF471Q9BX82 626 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-212ENST00000529046 CYTL1Q9NRR1 136 aa2.72□□□□□ -1.97
CSDE1-212ENST00000529046 TRBV25-1A0A075B6N4 114 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 TRAV1-1A0A0B4J248 108 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 GRIFINA4D1Z8 144 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 MAP1LC3B2A6NCE7 125 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 HMSDA8MTL9 139 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 TMEM262E9PQX1 116 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 F2Z2F3 143 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 G3V3Q6 166 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 M0R381 172 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 LECT2O14960 151 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 NDUFS5O43920 106 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 CRPP02741 224 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 ANGP03950 147 aaKnown RBP2.71□□□□□ -1.98
CSDE1-212ENST00000529046 AKR1C3P42330 323 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 PSMB2P49721 201 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 RPL37AP61513 92 aaKnown RBP2.71□□□□□ -1.98
CSDE1-212ENST00000529046 MPV17L2Q567V2 206 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 NTM-AS1Q6ZSK4 140 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 BAGE2Q86Y30 109 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 MAP1LC3BQ9GZQ8 125 aa2.71□□□□□ -1.98
CSDE1-212ENST00000529046 FXYD6-FXYD2A0A087WZ82 144 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 IGHV1-24A0A0C4DH33 117 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 M0QY20 66 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 PSPHP1O15172 72 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 IGLC6P0CF74 106 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 SMIM17P0DL12 118 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 MT1HL1P0DM35 61 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 RPS20P60866 119 aaKnown RBP2.7□□□□□ -1.98
CSDE1-212ENST00000529046 RAB14P61106 215 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 RBX1P62877 108 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 EIF5AP63241 154 aaKnown RBP2.7□□□□□ -1.98
CSDE1-212ENST00000529046 SPANXN1Q5VSR9 72 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 PCP2Q8IVA1 136 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 C9orf62Q8N4C0 152 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 KCNRGQ8N5I3 272 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 OR10AG1Q8NH19 301 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 SFT2D1Q8WV19 159 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 AP1S3Q96PC3 154 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 DERL1Q9BUN8 251 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 MAP1LC3AQ9H492 121 aa2.7□□□□□ -1.98
CSDE1-212ENST00000529046 LRP1Q07954 4544 aaKnown RBP2.7□□□□□ -1.98
CSDE1-212ENST00000529046 PKHD1L1Q86WI1 4243 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 FAT3Q8TDW7 4589 aa2.69□□□□□ -1.98
CSDE1-212ENST00000529046 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.69□□□□□ -1.98
CSDE1-212ENST00000529046 C19orf71A6NCJ1 209 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms