RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 UBE2L6O14933 153 aa11.4□□□□□ -0.58
SNRNP35-204ENST00000527158 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
SNRNP35-204ENST00000527158 Q6ZUT4 128 aa11.4□□□□□ -0.58
SNRNP35-204ENST00000527158 TEN1Q86WV5 123 aa11.4□□□□□ -0.58
SNRNP35-204ENST00000527158 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
SNRNP35-204ENST00000527158 SCGB1C2P0DMR2 95 aa11.4□□□□□ -0.59
SNRNP35-204ENST00000527158 CSDC2Q9Y534 153 aaKnown RBP11.4□□□□□ -0.59
SNRNP35-204ENST00000527158 GYPEP15421 78 aa11.39□□□□□ -0.59
SNRNP35-204ENST00000527158 SMCPP49901 116 aaPredicted RBP11.39□□□□□ -0.59
SNRNP35-204ENST00000527158 ERG28Q9UKR5 140 aa11.39□□□□□ -0.59
SNRNP35-204ENST00000527158 A4D1N5 150 aa11.38□□□□□ -0.59
SNRNP35-204ENST00000527158 TCL1BO95988 128 aa11.38□□□□□ -0.59
SNRNP35-204ENST00000527158 LINC00694P0DN24 101 aa11.38□□□□□ -0.59
SNRNP35-204ENST00000527158 TINCRA0A1B0GVN0 87 aa11.38□□□□□ -0.59
SNRNP35-204ENST00000527158 H7C423 109 aa11.38□□□□□ -0.59
SNRNP35-204ENST00000527158 PAX4O43316 350 aa11.37□□□□□ -0.59
SNRNP35-204ENST00000527158 IGHV3-33P01772 117 aa11.37□□□□□ -0.59
SNRNP35-204ENST00000527158 MTURNQ8N3F0 131 aa11.37□□□□□ -0.59
SNRNP35-204ENST00000527158 NBEAL2Q6ZNJ1 2754 aa11.37□□□□□ -0.59
SNRNP35-204ENST00000527158 TRBV6-8A0A0A6YYG3 113 aa11.37□□□□□ -0.59
SNRNP35-204ENST00000527158 IGHV1-58A0A0C4DH39 117 aa11.37□□□□□ -0.59
SNRNP35-204ENST00000527158 ATP5G1P05496 136 aa11.37□□□□□ -0.59
SNRNP35-204ENST00000527158 TMEM101Q96IK0 257 aa11.37□□□□□ -0.59
SNRNP35-204ENST00000527158 CELA1Q9UNI1 258 aa11.37□□□□□ -0.59
SNRNP35-204ENST00000527158 MAST4O15021 2626 aa11.37□□□□□ -0.59
SNRNP35-204ENST00000527158 A0A0J9YXY3 114 aa11.36□□□□□ -0.59
SNRNP35-204ENST00000527158 IGHV3-30-3P0DP02 117 aa11.36□□□□□ -0.59
SNRNP35-204ENST00000527158 MUSTN1Q8IVN3 82 aa11.35□□□□□ -0.59
SNRNP35-204ENST00000527158 SPANXDQ9BXN6 97 aa11.35□□□□□ -0.59
SNRNP35-204ENST00000527158 SPANXCQ9NY87 97 aa11.35□□□□□ -0.59
SNRNP35-204ENST00000527158 GEMIN7Q9H840 131 aaKnown RBP11.34□□□□□ -0.59
SNRNP35-204ENST00000527158 TMEM262E9PQX1 116 aa11.34□□□□□ -0.59
SNRNP35-204ENST00000527158 LINC01600Q96MT4 127 aa11.34□□□□□ -0.59
SNRNP35-204ENST00000527158 CDC42SE2Q9NRR3 84 aa11.34□□□□□ -0.59
SNRNP35-204ENST00000527158 TIMM17BO60830 172 aa11.33□□□□□ -0.6
SNRNP35-204ENST00000527158 CHCHD5Q9BSY4 110 aa11.33□□□□□ -0.6
SNRNP35-204ENST00000527158 TRBV30A0A0K0K1B3 111 aa11.33□□□□□ -0.6
SNRNP35-204ENST00000527158 A0A1B0GV72 72 aa11.33□□□□□ -0.6
SNRNP35-204ENST00000527158 F5H768 121 aa11.33□□□□□ -0.6
SNRNP35-204ENST00000527158 ATXN8Q156A1 80 aa11.33□□□□□ -0.6
SNRNP35-204ENST00000527158 SFTA2Q6UW10 78 aa11.33□□□□□ -0.6
SNRNP35-204ENST00000527158 COL6A5A8TX70 2615 aa11.32□□□□□ -0.6
SNRNP35-204ENST00000527158 GAGE6Q13070 117 aa11.32□□□□□ -0.6
SNRNP35-204ENST00000527158 VSIG2Q96IQ7 327 aa11.32□□□□□ -0.6
SNRNP35-204ENST00000527158 RETNQ9HD89 108 aa11.32□□□□□ -0.6
SNRNP35-204ENST00000527158 TIRAPP58753 221 aa11.31□□□□□ -0.6
SNRNP35-204ENST00000527158 NDUFA12Q9UI09 145 aa11.31□□□□□ -0.6
SNRNP35-204ENST00000527158 IGHV3-64A0A075B6Q5 118 aa11.31□□□□□ -0.6
SNRNP35-204ENST00000527158 SLC25A20O43772 301 aa11.31□□□□□ -0.6
SNRNP35-204ENST00000527158 IFITM1P13164 125 aa11.31□□□□□ -0.6
SNRNP35-204ENST00000527158 TRAV26-1A0A087WT03 109 aa11.3□□□□□ -0.6
SNRNP35-204ENST00000527158 HTN3P15516 51 aa11.3□□□□□ -0.6
SNRNP35-204ENST00000527158 LITAFQ99732 161 aa11.3□□□□□ -0.6
SNRNP35-204ENST00000527158 HERVK_113P63121 156 aa11.3□□□□□ -0.6
SNRNP35-204ENST00000527158 MIAQ16674 131 aa11.3□□□□□ -0.6
SNRNP35-204ENST00000527158 Q1RN00 199 aa11.3□□□□□ -0.6
SNRNP35-204ENST00000527158 A0A096LPF7 62 aa11.29□□□□□ -0.6
SNRNP35-204ENST00000527158 TRAV13-1A0A0B4J241 112 aa11.29□□□□□ -0.6
SNRNP35-204ENST00000527158 ZFAND6Q6FIF0 208 aa11.29□□□□□ -0.6
SNRNP35-204ENST00000527158 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
SNRNP35-204ENST00000527158 CDIP1Q9H305 208 aa11.29□□□□□ -0.6
SNRNP35-204ENST00000527158 COX6CP09669 75 aa11.28□□□□□ -0.6
SNRNP35-204ENST00000527158 FAM19A3Q7Z5A8 133 aa11.28□□□□□ -0.6
SNRNP35-204ENST00000527158 ANKRD29Q8N6D5 301 aa11.28□□□□□ -0.6
SNRNP35-204ENST00000527158 PKD1L1Q8TDX9 2849 aa11.28□□□□□ -0.6
SNRNP35-204ENST00000527158 IGLV5-45A0A087WSX0 123 aa11.28□□□□□ -0.6
SNRNP35-204ENST00000527158 LINC00242Q5T6M2 205 aa11.28□□□□□ -0.6
SNRNP35-204ENST00000527158 C9JAW5 83 aa11.27□□□□□ -0.6
SNRNP35-204ENST00000527158 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.6
SNRNP35-204ENST00000527158 COPS9Q8WXC6 57 aa11.27□□□□□ -0.6
SNRNP35-204ENST00000527158 C11orf68Q9H3H3 251 aaKnown RBP11.27□□□□□ -0.6
SNRNP35-204ENST00000527158 CDKN2A-AS1Q9UH64 79 aa11.27□□□□□ -0.6
SNRNP35-204ENST00000527158 MRPL23Q16540 153 aaKnown RBP11.27□□□□□ -0.61
SNRNP35-204ENST00000527158 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
SNRNP35-204ENST00000527158 TRAV8-3A0A0A6YYJ7 113 aa11.26□□□□□ -0.61
SNRNP35-204ENST00000527158 PRSS2P07478 247 aa11.26□□□□□ -0.61
SNRNP35-204ENST00000527158 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
SNRNP35-204ENST00000527158 COX6A2Q02221 97 aa11.26□□□□□ -0.61
SNRNP35-204ENST00000527158 LINC01620Q4KN68 170 aa11.26□□□□□ -0.61
SNRNP35-204ENST00000527158 IGLV4-60A0A075B6I1 120 aa11.25□□□□□ -0.61
SNRNP35-204ENST00000527158 NDUFA1O15239 70 aa11.25□□□□□ -0.61
SNRNP35-204ENST00000527158 ICOSQ9Y6W8 199 aa11.25□□□□□ -0.61
SNRNP35-204ENST00000527158 TRBV10-2A0A0K0K1G8 114 aa11.24□□□□□ -0.61
SNRNP35-204ENST00000527158 H7C2G1 150 aa11.24□□□□□ -0.61
SNRNP35-204ENST00000527158 A0A1B0GUV1 79 aa11.23□□□□□ -0.61
SNRNP35-204ENST00000527158 PRB2P02812 416 aaPredicted RBP11.23□□□□□ -0.61
SNRNP35-204ENST00000527158 RPL13AP40429 203 aaKnown RBP11.23□□□□□ -0.61
SNRNP35-204ENST00000527158 MDFIQ99750 246 aa11.23□□□□□ -0.61
SNRNP35-204ENST00000527158 IGKV3OR2-268A0A0C4DH90 116 aa11.22□□□□□ -0.61
SNRNP35-204ENST00000527158 H3BT86 120 aa11.22□□□□□ -0.61
SNRNP35-204ENST00000527158 TRIAP1O43715 76 aa11.22□□□□□ -0.61
SNRNP35-204ENST00000527158 CMYA5Q8N3K9 4069 aa11.22□□□□□ -0.61
SNRNP35-204ENST00000527158 A0A0J9YWU9 116 aa11.21□□□□□ -0.61
SNRNP35-204ENST00000527158 DEFB121Q5J5C9 76 aa11.21□□□□□ -0.61
SNRNP35-204ENST00000527158 ADAMTSL4-AS1Q5T5F5 129 aa11.21□□□□□ -0.61
SNRNP35-204ENST00000527158 CKS1BP61024 79 aa11.21□□□□□ -0.62
SNRNP35-204ENST00000527158 PPDPFQ9H3Y8 114 aa11.21□□□□□ -0.62
SNRNP35-204ENST00000527158 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
SNRNP35-204ENST00000527158 K7EIL1 84 aa11.2□□□□□ -0.62
SNRNP35-204ENST00000527158 Q6ZTC4 211 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms