RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PATE2	Q6UY27	113 aa		2.57	□□□□□ -2
PCM1-223	ENST00000524356	DPPA3	Q6W0C5	159 aa		2.57	□□□□□ -2
PCM1-223	ENST00000524356	ZCCHC23	Q6ZST2	131 aa		2.57	□□□□□ -2
PCM1-223	ENST00000524356	LINC00311	Q8N616	119 aa		2.57	□□□□□ -2
PCM1-223	ENST00000524356	ZNF563	Q8TA94	476 aa		2.57	□□□□□ -2
PCM1-223	ENST00000524356	DUSP21	Q9H596	190 aa		2.57	□□□□□ -2
PCM1-223	ENST00000524356	TPRKB	Q9Y3C4	175 aa		2.57	□□□□□ -2
PCM1-223	ENST00000524356	MPC1	Q9Y5U8	109 aa		2.57	□□□□□ -2
PCM1-223	ENST00000524356	LINC00312	Q9Y6C7	94 aa		2.57	□□□□□ -2
PCM1-223	ENST00000524356	HERC1	Q15751	4861 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	IGKV1D-42	A0A075B6H8	117 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	ZNF705F	A8MVS1	300 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-223	ENST00000524356	SDCBP	O00560	298 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-223	ENST00000524356	HYPM	O75409	117 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	UBL3	O95164	117 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	SFT2D2	O95562	160 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	IFI6	P09912	130 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	ZNF705B	P0CI00	300 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-223	ENST00000524356	PYY	P10082	97 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	ELOB	Q15370	118 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	LY6E	Q16553	131 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	KRTAP21-2	Q3LI59	83 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356		Q6AWC8	147 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356		Q6ZUT4	128 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	LYPD6	Q86Y78	171 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	SBSPON	Q8IVN8	264 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	CLECL1	Q8IZS7	167 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	C10orf111	Q8N326	155 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	KCNRG	Q8N5I3	272 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	DPH3	Q96FX2	82 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	WFDC6	Q9BQY6	131 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356		S4R3C0	116 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	MUC4	Q99102	2169 aa		2.56	□□□□□ -2
PCM1-223	ENST00000524356	UBR4	Q5T4S7	5183 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356	IGHV3OR16-8	A0A075B7F1	116 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-223	ENST00000524356	CYB5A	P00167	134 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356	LINC00032	P0C843	101 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356	HINT1	P49773	126 aa	Predicted RBP	2.55	□□□□□ -2
PCM1-223	ENST00000524356	SNRPD3	P62318	126 aa	Known RBP	2.55	□□□□□ -2
PCM1-223	ENST00000524356	BLCAP	P62952	87 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356	MRPS36	P82909	103 aa	Known RBP	2.55	□□□□□ -2
PCM1-223	ENST00000524356		Q0VG73	95 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356	PYDC2	Q56P42	97 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356		Q8NAQ8	132 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356	ATP6V0E2	Q8NHE4	81 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356	TIMM9	Q9Y5J7	89 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356	KMT2A	Q03164	3969 aa		2.55	□□□□□ -2
PCM1-223	ENST00000524356	TRAV7	A0A075B6U4	112 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	KANTR	A0A1W2PQU2	76 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356		H3BUX3	64 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	HMGN4	O00479	90 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	GEMIN2	O14893	280 aa	Known RBP	2.54	□□□□□ -2
PCM1-223	ENST00000524356	MT-ATP8	P03928	68 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	TFF1	P04155	84 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	DEFA4	P12838	97 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	IFITM1	P13164	125 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	TPT1	P13693	172 aa	Known RBP	2.54	□□□□□ -2
PCM1-223	ENST00000524356	ZNF22	P17026	224 aa	Predicted RBP	2.54	□□□□□ -2
PCM1-223	ENST00000524356	FXYD2	P54710	66 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	CDK5R1	Q15078	307 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	BVES-AS1	Q5T3Y7	98 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	HCP5	Q6MZN7	132 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	LYZL1	Q6UWQ5	148 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	NDUFA11	Q86Y39	141 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	ATOH7	Q8N100	152 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	FAM216B	Q8N7L0	139 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	AQP3	Q92482	292 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	SPANXD	Q9BXN6	97 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	NDUFB11	Q9NX14	153 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	NHP2	Q9NX24	153 aa	Known RBP	2.54	□□□□□ -2
PCM1-223	ENST00000524356	DNAJC15	Q9Y5T4	150 aa		2.54	□□□□□ -2
PCM1-223	ENST00000524356	TRBV10-2	A0A0K0K1G8	114 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356		A0A1B0GU33	70 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	SNRPGP15	A8MWD9	76 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356		F8W1H4	67 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356		H3BRM9	83 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356		H7C2G1	150 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	SYNGR2	O43760	224 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	TIMM17B	O60830	172 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	CPSF4	O95639	269 aa	Known RBP	2.53	□□□□□ -2
PCM1-223	ENST00000524356	IL5	P05113	134 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	SLC25A6	P12236	298 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	POLR2J	P52435	117 aa	Known RBP	2.53	□□□□□ -2
PCM1-223	ENST00000524356	TMEM258	P61165	79 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	RPL38	P63173	70 aa	Known RBP	2.53	□□□□□ -2
PCM1-223	ENST00000524356	SEC11A	P67812	179 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	KRTAP25-1	Q3LHN0	102 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	SPATA45	Q537H7	98 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	LINC00483	Q53H64	154 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	VMO1	Q7Z5L0	202 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	OR5AS1	Q8N127	324 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	CHCHD1	Q96BP2	118 aa	Known RBP	2.53	□□□□□ -2
PCM1-223	ENST00000524356	LINC00467	Q9BRT7	94 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	SLC35B3	Q9H1N7	401 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	ST20	Q9HBF5	79 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	BCL2L10	Q9HD36	194 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	TMEM242	Q9NWH2	141 aa		2.53	□□□□□ -2
PCM1-223	ENST00000524356	NOP16	Q9Y3C1	178 aa	Known RBP	2.53	□□□□□ -2
PCM1-223	ENST00000524356	SORL1	Q92673	2214 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms