RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 PKHD1L1Q86WI1 4243 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 TRBV7-3A0A075B6L6 115 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 TRBV6-8A0A0A6YYG3 113 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 XKRY2A2RUG3 117 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 HSBP1L1C9JCN9 74 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 SH2D1AO60880 128 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 CXorf1O96002 111 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 MT1HL1P0DM35 61 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 UBE2D3P61077 147 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 UBE2D2P62837 147 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 ZNF56Q15929 161 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 SMIM15Q7Z3B0 74 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 Q86TA4 180 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 OR2D3Q8NGH3 330 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 FAM213BQ8TBF2 198 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 SFRP2Q96HF1 295 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 MIEN1Q9BRT3 115 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 CHCHD7Q9BUK0 85 aa3.34□□□□□ -1.87
CTNNA1-239ENST00000523685 IGLV10-54A0A075B6I4 117 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 MUC21A0A0G2JKD1 596 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 TRBV10-1A0A0K0K1A3 114 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 MUC21A0A140T8X8 626 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 ZNF727A8MUV8 499 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 PEX7O00628 323 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 BCL2P10415 239 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 ESDP10768 282 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 ATP6V0CP27449 155 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 CRIP1P50238 77 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 HERV-K104P63124 156 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 MIAQ16674 131 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 FAM162BQ5T6X4 162 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 Q6ZRU5 148 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 LINC00269Q8N2A0 174 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 C9orf163Q8N9P6 203 aa3.33□□□□□ -1.88
CTNNA1-239ENST00000523685 A0A1W2PRE2 83 aa3.32□□□□□ -1.88
CTNNA1-239ENST00000523685 IFNA1P01562 189 aa3.32□□□□□ -1.88
CTNNA1-239ENST00000523685 CHTF8P0CG12 524 aa3.32□□□□□ -1.88
CTNNA1-239ENST00000523685 UBE2G1P62253 170 aa3.32□□□□□ -1.88
CTNNA1-239ENST00000523685 RPL19P84098 196 aaKnown RBP3.32□□□□□ -1.88
CTNNA1-239ENST00000523685 SDIM1Q6ZPB5 146 aa3.32□□□□□ -1.88
CTNNA1-239ENST00000523685 PSMG3Q9BT73 122 aaPredicted RBP3.32□□□□□ -1.88
CTNNA1-239ENST00000523685 NAT8Q9UHE5 227 aa3.32□□□□□ -1.88
CTNNA1-239ENST00000523685 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 IGHV3-64A0A075B6Q5 118 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 TRAV9-1A0A075B6T8 112 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 C20orf202A1L168 122 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 MAP1LC3B2A6NCE7 125 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 TMEM250H0YL14 139 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 CCL20P78556 96 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 SERF2P84101 59 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 ZNF726P1Q15940 193 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 LINC01551Q86U37 167 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 OR10AG1Q8NH19 301 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 GTSF1Q8WW33 167 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 MBD3L1Q8WWY6 194 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 DERL1Q9BUN8 251 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 MAP1LC3BQ9GZQ8 125 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 LRP2P98164 4655 aa3.31□□□□□ -1.88
CTNNA1-239ENST00000523685 TRBV25-1A0A075B6N4 114 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 IGKV2-24A0A0C4DH68 120 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 IGKV3OR2-268A0A0C4DH90 116 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 TRBV6-1A0A0K0K1D8 114 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 CTXND1A0A1B0GTU2 59 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 RPL37AP8A6NKH3 93 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 MGPP08493 103 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 SMIM17P0DL12 118 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 CTRLP40313 264 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 REG3AQ06141 175 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 SPANXN1Q5VSR9 72 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 KRTAP26-1Q6PEX3 210 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 NTM-AS1Q6ZSK4 140 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 C7orf33Q8WU49 177 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 SMIM12Q96EX1 92 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 FMC1Q96HJ9 113 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 VAMP8Q9BV40 100 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 UQCR10Q9UDW1 63 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 KIF25-AS1Q9Y6Z4 181 aa3.3□□□□□ -1.88
CTNNA1-239ENST00000523685 IGHV1-24A0A0C4DH33 117 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 A0A1B0GV50 99 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 CCL25O15444 150 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 LTAP01374 205 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 CNBPP62633 177 aaKnown RBP3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 RPL23P62829 140 aaKnown RBP3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 MAJINQ3KP22 176 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 TMEM97Q5BJF2 176 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 SPACA4Q8TDM5 124 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 SMIM7Q9BQ49 75 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 TPPP3Q9BW30 176 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 MANBALQ9NQG1 85 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 PRR34Q9NV39 138 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 TNXBP22105 4242 aa3.29□□□□□ -1.88
CTNNA1-239ENST00000523685 IGLV4-60A0A075B6I1 120 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 TMEM238C9JI98 176 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 UBE2L6O14933 153 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 CEBPGP53567 150 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 MEF2BQ02080 365 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 COX6A2Q02221 97 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 CIRBPQ14011 172 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms