RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 UBE2L6O14933 153 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 ZNF73O43830 326 aaPredicted RBP3.54□□□□□ -1.84
PABPC1-223ENST00000523636 DEFA4P12838 97 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 CCL3L1P16619 93 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 CBLN1P23435 193 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 CD24P25063 80 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 ZNF80P51504 273 aaPredicted RBP3.54□□□□□ -1.84
PABPC1-223ENST00000523636 WT1-ASQ06250 92 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 PLGLAQ15195 96 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 RRN3P1Q2M238 152 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 LCA10Q71F78 164 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 LINC00305Q7Z4B0 112 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 ATOH7Q8N100 152 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 DPH3Q96FX2 82 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 WFDC10AQ9H1F0 79 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 ZNF355PQ9NSJ1 428 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 EPDR1Q9UM22 224 aa3.54□□□□□ -1.84
PABPC1-223ENST00000523636 IGKV1OR2-108A0A075B7D4 117 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 IGHV1-3A0A0C4DH29 117 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 IGHV1-58A0A0C4DH39 117 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 ODF3BA8MYP8 253 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 OOSP1A8MZH6 123 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 IGLL5B9A064 214 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 BUB1B-PAK6H3BSN5 160 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 SERF1AO75920 110 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 LTAP01374 205 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 IGLV1-51P01701 117 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 IGLV2-23P01705 113 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 SLC25A5P05141 298 aaKnown RBP3.53□□□□□ -1.84
PABPC1-223ENST00000523636 DIAPH2-AS1Q14236 149 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 SLC25A34Q6PIV7 304 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 TMEM256Q8N2U0 113 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 C18orf32Q8TCD1 76 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 TSKUQ8WUA8 353 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 C4orf3Q8WVX3 66 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 RAB37Q96AX2 223 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 FAM167A-AS1Q96KT0 104 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 GFRA4Q9GZZ7 299 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 SND1-IT1Q9HBX3 110 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 TMEM14CQ9P0S9 112 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 ZNF492Q9P255 531 aa3.53□□□□□ -1.84
PABPC1-223ENST00000523636 IGLV2-18A0A075B6J9 118 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 TRBV6-1A0A0K0K1D8 114 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 GRIFINA4D1Z8 144 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 SMIM1B2RUZ4 78 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 H3BMG7 143 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 M0R2P5 195 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 UQCRQO14949 82 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 IGLV1-47P01700 117 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 FABP2P12104 132 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 COX7A1P24310 79 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 TMEM258P61165 79 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 PRR4Q16378 134 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 ORMDL2Q53FV1 153 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 ADAMTSL4-AS1Q5T5F5 129 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 PATE2Q6UY27 113 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 TMEM136Q6ZRR5 245 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 BPIFA4PQ86YQ2 179 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 OR10AG1Q8NH19 301 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 LINC00526Q96FQ7 95 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 VGLL1Q99990 258 aa3.52□□□□□ -1.85
PABPC1-223ENST00000523636 RPP21Q9H633 154 aaKnown RBP3.52□□□□□ -1.85
PABPC1-223ENST00000523636 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
PABPC1-223ENST00000523636 IGLV4-3A0A075B6K6 122 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 IGKV1D-37A0A075B6S9 117 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 A0A1W2PPM0 123 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 SPINK4O60575 86 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 DUSP14O95147 198 aaKnown RBP3.51□□□□□ -1.85
PABPC1-223ENST00000523636 TCRAP04437 139 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 PYYP10082 97 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 CRYGAP11844 174 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 CSN1S1P47710 185 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 KRTDAPP60985 99 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 HBBP68871 147 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 FXYD3Q14802 87 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 PSMG4Q5JS54 123 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 POM121L12Q8N7R1 296 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 Q8N976 141 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 MYOZ3Q8TDC0 251 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 FAM104AQ969W3 186 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 CHCHD1Q96BP2 118 aaKnown RBP3.51□□□□□ -1.85
PABPC1-223ENST00000523636 TIMM17AQ99595 171 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 FAM103A1Q9BTL3 118 aaKnown RBP3.51□□□□□ -1.85
PABPC1-223ENST00000523636 SPCS1Q9Y6A9 102 aa3.51□□□□□ -1.85
PABPC1-223ENST00000523636 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 IGHV3-72A0A0B4J1Y9 119 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 TRAV13-1A0A0B4J241 112 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 HIGD1CA8MV81 97 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 A8MWV9 139 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 E7EUB6 86 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 I3L2K1 104 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 NUPR1O60356 82 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 ZNF324O75467 553 aaPredicted RBP3.5□□□□□ -1.85
PABPC1-223ENST00000523636 MT-ATP8P03928 68 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 LGALS3P17931 250 aaKnown RBP3.5□□□□□ -1.85
PABPC1-223ENST00000523636 LINC01547P58512 204 aaPredicted RBP3.5□□□□□ -1.85
PABPC1-223ENST00000523636 HERVK_113P61574 105 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 LYZP61626 148 aa3.5□□□□□ -1.85
PABPC1-223ENST00000523636 HAMPP81172 84 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 839.3 ms