RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 LINC01356Q8N9X3 169 aa6.51□□□□□ -1.37
CSMD1-212ENST00000523387 RPL28P46779 137 aaKnown RBP6.51□□□□□ -1.37
CSMD1-212ENST00000523387 DCHS1Q96JQ0 3298 aa6.51□□□□□ -1.37
CSMD1-212ENST00000523387 TMEM89A2RUT3 159 aa6.51□□□□□ -1.37
CSMD1-212ENST00000523387 Q6JHZ5 121 aa6.51□□□□□ -1.37
CSMD1-212ENST00000523387 FN1P02751 2386 aaKnown RBP6.51□□□□□ -1.37
CSMD1-212ENST00000523387 C19orf84I3L1E1 186 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 LINC00846Q9NV44 126 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 JMJD7-PLA2G4BH0Y9G9 81 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 CHD8Q9HCK8 2581 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 CCDC168Q8NDH2 2452 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 BRI3O95415 125 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 WFDC9Q8NEX5 89 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 IGLV5-39A0A0G2JS06 123 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 CCL18P55774 89 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 ENHOQ6UWT2 76 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.5□□□□□ -1.37
CSMD1-212ENST00000523387 CDC42SE2Q9NRR3 84 aa6.5□□□□□ -1.37
CSMD1-212ENST00000523387 LINC00337Q8N6G1 96 aa6.49□□□□□ -1.37
CSMD1-212ENST00000523387 CRYGAP11844 174 aa6.49□□□□□ -1.37
CSMD1-212ENST00000523387 NAV2Q8IVL1 2488 aa6.49□□□□□ -1.37
CSMD1-212ENST00000523387 LINC01600Q96MT4 127 aa6.49□□□□□ -1.37
CSMD1-212ENST00000523387 HRCT1Q6UXD1 115 aa6.48□□□□□ -1.37
CSMD1-212ENST00000523387 PRORYQ9H606 182 aa6.48□□□□□ -1.37
CSMD1-212ENST00000523387 AVPP01185 164 aa6.48□□□□□ -1.37
CSMD1-212ENST00000523387 IGLV5-45A0A087WSX0 123 aa6.48□□□□□ -1.37
CSMD1-212ENST00000523387 A0A096LPF7 62 aa6.48□□□□□ -1.37
CSMD1-212ENST00000523387 IBA57-AS1B1ANH7 110 aa6.48□□□□□ -1.37
CSMD1-212ENST00000523387 DSCR9P59020 149 aa6.48□□□□□ -1.37
CSMD1-212ENST00000523387 C18orf65Q6ZTR6 163 aa6.48□□□□□ -1.37
CSMD1-212ENST00000523387 UPK3BQ9BT76 320 aa6.48□□□□□ -1.37
CSMD1-212ENST00000523387 MAP1AP78559 2803 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-212ENST00000523387 JMJD1CQ15652 2540 aa6.47□□□□□ -1.37
CSMD1-212ENST00000523387 KIR2DL5BQ8NHK3 375 aa6.47□□□□□ -1.37
CSMD1-212ENST00000523387 TMEM256-PLSCR3K7ERE1 68 aa6.47□□□□□ -1.37
CSMD1-212ENST00000523387 TNRC18O15417 2968 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-212ENST00000523387 RBM3P98179 157 aaKnown RBP6.47□□□□□ -1.37
CSMD1-212ENST00000523387 NBL1P41271 181 aa6.46□□□□□ -1.37
CSMD1-212ENST00000523387 LRBAP50851 2863 aa6.46□□□□□ -1.37
CSMD1-212ENST00000523387 LOC100131303A0A0U1RQF7 123 aa6.46□□□□□ -1.38
CSMD1-212ENST00000523387 FAM236DA0A1B0GTK5 79 aa6.46□□□□□ -1.38
CSMD1-212ENST00000523387 FAM236CP0DP71 79 aa6.46□□□□□ -1.38
CSMD1-212ENST00000523387 POLQO75417 2590 aa6.46□□□□□ -1.38
CSMD1-212ENST00000523387 AKAP13Q12802 2813 aa6.45□□□□□ -1.38
CSMD1-212ENST00000523387 HILS1P60008 231 aa6.45□□□□□ -1.38
CSMD1-212ENST00000523387 DEFB114Q30KQ6 69 aa6.45□□□□□ -1.38
CSMD1-212ENST00000523387 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
CSMD1-212ENST00000523387 C1orf43Q9BWL3 253 aa6.45□□□□□ -1.38
CSMD1-212ENST00000523387 NDUFC2O95298 119 aa6.44□□□□□ -1.38
CSMD1-212ENST00000523387 SPTBN4Q9H254 2564 aa6.44□□□□□ -1.38
CSMD1-212ENST00000523387 IGLV10-54A0A075B6I4 117 aa6.44□□□□□ -1.38
CSMD1-212ENST00000523387 F5H768 121 aa6.44□□□□□ -1.38
CSMD1-212ENST00000523387 BEAN1Q3B7T3 259 aa6.44□□□□□ -1.38
CSMD1-212ENST00000523387 DPH3Q96FX2 82 aa6.44□□□□□ -1.38
CSMD1-212ENST00000523387 CCKP06307 115 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 FAM19A1Q7Z5A9 133 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 C11orf72Q8NBR9 251 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 C16orf74Q96GX8 76 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 ZFHX4Q86UP3 3567 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 J3QLI3 93 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 PRB1P04280 392 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 HTN3P15516 51 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 RPS28P62857 69 aaKnown RBP6.43□□□□□ -1.38
CSMD1-212ENST00000523387 NTM-AS1Q6ZSK4 140 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 ASPMQ8IZT6 3477 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 FAM104AQ969W3 186 aa6.43□□□□□ -1.38
CSMD1-212ENST00000523387 ANGP03950 147 aaKnown RBP6.42□□□□□ -1.38
CSMD1-212ENST00000523387 GYPEP15421 78 aa6.42□□□□□ -1.38
CSMD1-212ENST00000523387 CMC4P56277 68 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-212ENST00000523387 C6orf99Q4VX62 202 aa6.42□□□□□ -1.38
CSMD1-212ENST00000523387 IGLV4-60A0A075B6I1 120 aa6.42□□□□□ -1.38
CSMD1-212ENST00000523387 TRBV6-4A0A1B0GX49 114 aa6.42□□□□□ -1.38
CSMD1-212ENST00000523387 Q96MF0 132 aa6.42□□□□□ -1.38
CSMD1-212ENST00000523387 MYO18BQ8IUG5 2567 aa6.42□□□□□ -1.38
CSMD1-212ENST00000523387 TRBV6-8A0A0A6YYG3 113 aa6.42□□□□□ -1.38
CSMD1-212ENST00000523387 PRR3P79522 188 aaKnown RBP6.42□□□□□ -1.38
CSMD1-212ENST00000523387 ZNF702PQ9H963 129 aa6.42□□□□□ -1.38
CSMD1-212ENST00000523387 C4orf3Q8WVX3 66 aa6.41□□□□□ -1.38
CSMD1-212ENST00000523387 IGKV2-28A0A075B6P5 120 aa6.41□□□□□ -1.38
CSMD1-212ENST00000523387 CCL24O00175 119 aa6.41□□□□□ -1.38
CSMD1-212ENST00000523387 IGKV2D-28P01615 120 aa6.41□□□□□ -1.38
CSMD1-212ENST00000523387 C4orf26Q17RF5 130 aa6.41□□□□□ -1.38
CSMD1-212ENST00000523387 SNURFQ9Y675 71 aa6.41□□□□□ -1.38
CSMD1-212ENST00000523387 C1orf158Q8N1D5 194 aa6.41□□□□□ -1.38
CSMD1-212ENST00000523387 ATMQ13315 3056 aa6.4□□□□□ -1.38
CSMD1-212ENST00000523387 DMDP11532 3685 aa6.4□□□□□ -1.38
CSMD1-212ENST00000523387 ODF3L2Q3SX64 289 aa6.4□□□□□ -1.38
CSMD1-212ENST00000523387 ZNF292O60281 2723 aa6.4□□□□□ -1.38
CSMD1-212ENST00000523387 C9orf129Q5T035 196 aaKnown RBP6.4□□□□□ -1.39
CSMD1-212ENST00000523387 SCXQ7RTU7 201 aa6.4□□□□□ -1.39
CSMD1-212ENST00000523387 LINC00959A0A1B0GUT2 108 aa6.39□□□□□ -1.39
CSMD1-212ENST00000523387 C2orf48Q96LS8 159 aa6.39□□□□□ -1.39
CSMD1-212ENST00000523387 A0A087WZ39 114 aa6.39□□□□□ -1.39
CSMD1-212ENST00000523387 LINC01561Q8N1V8 128 aa6.39□□□□□ -1.39
CSMD1-212ENST00000523387 Q8N814 137 aa6.39□□□□□ -1.39
CSMD1-212ENST00000523387 PKD1L2Q7Z442 2459 aa6.38□□□□□ -1.39
CSMD1-212ENST00000523387 TRAV25A0A0B4J276 109 aa6.38□□□□□ -1.39
CSMD1-212ENST00000523387 Q6YL49 198 aa6.38□□□□□ -1.39
CSMD1-212ENST00000523387 ABCA12Q86UK0 2595 aa6.38□□□□□ -1.39
CSMD1-212ENST00000523387 LINC00269Q8N2A0 174 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms