RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 TRAV8-3A0A0A6YYJ7 113 aa10.57□□□□□ -0.72
CTNNA1-236ENST00000522792 TSPEAR-AS2P59090 65 aa10.57□□□□□ -0.72
CTNNA1-236ENST00000522792 HERVK_113P63121 156 aa10.57□□□□□ -0.72
CTNNA1-236ENST00000522792 FAM19A3Q7Z5A8 133 aa10.57□□□□□ -0.72
CTNNA1-236ENST00000522792 PRKDCP78527 4128 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-236ENST00000522792 C2orf91Q6ZV80 131 aa10.56□□□□□ -0.72
CTNNA1-236ENST00000522792 LINC00269Q8N2A0 174 aa10.56□□□□□ -0.72
CTNNA1-236ENST00000522792 IGHV3-30P01768 117 aa10.55□□□□□ -0.72
CTNNA1-236ENST00000522792 IGHV3-33P01772 117 aa10.55□□□□□ -0.72
CTNNA1-236ENST00000522792 IGHV3-30-3P0DP02 117 aa10.55□□□□□ -0.72
CTNNA1-236ENST00000522792 IGHV3-30-5P0DP03 117 aa10.55□□□□□ -0.72
CTNNA1-236ENST00000522792 SEC11AP67812 179 aa10.55□□□□□ -0.72
CTNNA1-236ENST00000522792 C15orf53Q8NAA6 179 aa10.55□□□□□ -0.72
CTNNA1-236ENST00000522792 IGLV5-45A0A087WSX0 123 aa10.55□□□□□ -0.72
CTNNA1-236ENST00000522792 LINC00959A0A1B0GUT2 108 aa10.55□□□□□ -0.72
CTNNA1-236ENST00000522792 H3BRM9 83 aa10.53□□□□□ -0.72
CTNNA1-236ENST00000522792 LEPROTO15243 131 aa10.53□□□□□ -0.72
CTNNA1-236ENST00000522792 MYMXA0A1B0GTQ4 84 aa10.53□□□□□ -0.72
CTNNA1-236ENST00000522792 ZNF815PA8K554 130 aa10.53□□□□□ -0.72
CTNNA1-236ENST00000522792 J3QQQ9 107 aa10.53□□□□□ -0.72
CTNNA1-236ENST00000522792 ORAOV1Q8WV07 137 aa10.53□□□□□ -0.72
CTNNA1-236ENST00000522792 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
CTNNA1-236ENST00000522792 MRPS16Q9Y3D3 137 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-236ENST00000522792 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.73
CTNNA1-236ENST00000522792 LGALS3P17931 250 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-236ENST00000522792 REG3AQ06141 175 aa10.52□□□□□ -0.73
CTNNA1-236ENST00000522792 KLK12Q9UKR0 248 aa10.52□□□□□ -0.73
CTNNA1-236ENST00000522792 STAB2Q8WWQ8 2551 aa10.52□□□□□ -0.73
CTNNA1-236ENST00000522792 CCL25O15444 150 aa10.51□□□□□ -0.73
CTNNA1-236ENST00000522792 XCL1P47992 114 aa10.51□□□□□ -0.73
CTNNA1-236ENST00000522792 SS18Q15532 418 aa10.51□□□□□ -0.73
CTNNA1-236ENST00000522792 IGLV10-54A0A075B6I4 117 aa10.51□□□□□ -0.73
CTNNA1-236ENST00000522792 PLEKHB2Q96CS7 222 aa10.51□□□□□ -0.73
CTNNA1-236ENST00000522792 SMIM1B2RUZ4 78 aa10.5□□□□□ -0.73
CTNNA1-236ENST00000522792 LINC00588Q9Y4M8 146 aa10.5□□□□□ -0.73
CTNNA1-236ENST00000522792 SIVA1O15304 175 aa10.49□□□□□ -0.73
CTNNA1-236ENST00000522792 HINT1P49773 126 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-236ENST00000522792 C5orf38Q86SI9 138 aa10.49□□□□□ -0.73
CTNNA1-236ENST00000522792 IGHV3OR16-9A0A0B4J2B5 98 aa10.48□□□□□ -0.73
CTNNA1-236ENST00000522792 SCGB1D4Q6XE38 83 aa10.48□□□□□ -0.73
CTNNA1-236ENST00000522792 COX11Q9Y6N1 276 aa10.48□□□□□ -0.73
CTNNA1-236ENST00000522792 K7EP13 123 aa10.47□□□□□ -0.73
CTNNA1-236ENST00000522792 CCL18P55774 89 aa10.47□□□□□ -0.73
CTNNA1-236ENST00000522792 ENHOQ6UWT2 76 aa10.47□□□□□ -0.73
CTNNA1-236ENST00000522792 CHCHD10Q8WYQ3 142 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-236ENST00000522792 UBE2WQ96B02 151 aa10.47□□□□□ -0.73
CTNNA1-236ENST00000522792 IGLV5-39A0A0G2JS06 123 aa10.46□□□□□ -0.73
CTNNA1-236ENST00000522792 PTTG1IPP53801 180 aa10.46□□□□□ -0.73
CTNNA1-236ENST00000522792 PRR34Q9NV39 138 aa10.46□□□□□ -0.73
CTNNA1-236ENST00000522792 CRPP02741 224 aa10.46□□□□□ -0.74
CTNNA1-236ENST00000522792 UBE2V1Q13404 147 aa10.46□□□□□ -0.74
CTNNA1-236ENST00000522792 HIGD1BQ9P298 99 aa10.46□□□□□ -0.74
CTNNA1-236ENST00000522792 NDUFA12Q9UI09 145 aa10.45□□□□□ -0.74
CTNNA1-236ENST00000522792 A0A087WZ39 114 aa10.45□□□□□ -0.74
CTNNA1-236ENST00000522792 LINC01556Q5JQF7 62 aa10.45□□□□□ -0.74
CTNNA1-236ENST00000522792 ZFAND6Q6FIF0 208 aa10.44□□□□□ -0.74
CTNNA1-236ENST00000522792 CD164L2Q6UWJ8 174 aa10.44□□□□□ -0.74
CTNNA1-236ENST00000522792 C10orf126Q8N4M7 172 aa10.44□□□□□ -0.74
CTNNA1-236ENST00000522792 TOMM7Q9P0U1 55 aa10.44□□□□□ -0.74
CTNNA1-236ENST00000522792 HSD52Q0P140 79 aa10.43□□□□□ -0.74
CTNNA1-236ENST00000522792 Q6ZVH6 145 aa10.43□□□□□ -0.74
CTNNA1-236ENST00000522792 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
CTNNA1-236ENST00000522792 APLNQ9ULZ1 77 aa10.43□□□□□ -0.74
CTNNA1-236ENST00000522792 GAGE12HA6NDE8 117 aa10.43□□□□□ -0.74
CTNNA1-236ENST00000522792 BVES-AS1Q5T3Y7 98 aa10.43□□□□□ -0.74
CTNNA1-236ENST00000522792 DNAH10OSP0CZ25 163 aa10.42□□□□□ -0.74
CTNNA1-236ENST00000522792 SVIPQ8NHG7 77 aa10.42□□□□□ -0.74
CTNNA1-236ENST00000522792 NUPR2A6NF83 97 aa10.41□□□□□ -0.74
CTNNA1-236ENST00000522792 COX7A2LO14548 114 aa10.41□□□□□ -0.74
CTNNA1-236ENST00000522792 FOXI1Q12951 378 aa10.41□□□□□ -0.74
CTNNA1-236ENST00000522792 COX7B2Q8TF08 81 aa10.41□□□□□ -0.74
CTNNA1-236ENST00000522792 DYNC2H1Q8NCM8 4307 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-236ENST00000522792 A0A0J9YXY3 114 aa10.41□□□□□ -0.74
CTNNA1-236ENST00000522792 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
CTNNA1-236ENST00000522792 Q9H8V8 135 aa10.41□□□□□ -0.74
CTNNA1-236ENST00000522792 NDUFA1O15239 70 aa10.4□□□□□ -0.74
CTNNA1-236ENST00000522792 GCSHP23434 173 aa10.4□□□□□ -0.74
CTNNA1-236ENST00000522792 MIAQ16674 131 aa10.4□□□□□ -0.75
CTNNA1-236ENST00000522792 ZNF625Q96I27 306 aaPredicted RBP10.4□□□□□ -0.75
CTNNA1-236ENST00000522792 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.75
CTNNA1-236ENST00000522792 MALP21145 153 aa10.39□□□□□ -0.75
CTNNA1-236ENST00000522792 UPK3BQ9BT76 320 aa10.39□□□□□ -0.75
CTNNA1-236ENST00000522792 TRAV8-4A0A0B4J246 113 aa10.38□□□□□ -0.75
CTNNA1-236ENST00000522792 UBE2DNLQ8IWF7 75 aa10.38□□□□□ -0.75
CTNNA1-236ENST00000522792 FBN3Q75N90 2809 aa10.38□□□□□ -0.75
CTNNA1-236ENST00000522792 SRSF9Q13242 221 aaKnown RBP eCLIP10.38□□□□□ -0.75
CTNNA1-236ENST00000522792 Q9HAA7 133 aa10.38□□□□□ -0.75
CTNNA1-236ENST00000522792 CEND1Q8N111 149 aa10.37□□□□□ -0.75
CTNNA1-236ENST00000522792 FXYD2P54710 66 aa10.36□□□□□ -0.75
CTNNA1-236ENST00000522792 TAL2Q16559 108 aa10.36□□□□□ -0.75
CTNNA1-236ENST00000522792 LINC01561Q8N1V8 128 aa10.36□□□□□ -0.75
CTNNA1-236ENST00000522792 DNAH7Q8WXX0 4024 aa10.36□□□□□ -0.75
CTNNA1-236ENST00000522792 CSMD3Q7Z407 3707 aa10.36□□□□□ -0.75
CTNNA1-236ENST00000522792 IGKV2D-24A0A075B6R9 120 aa10.35□□□□□ -0.75
CTNNA1-236ENST00000522792 TAX1BP3O14907 124 aa10.35□□□□□ -0.75
CTNNA1-236ENST00000522792 PRSS2P07478 247 aa10.35□□□□□ -0.75
CTNNA1-236ENST00000522792 C6orf226Q5I0X4 101 aa10.35□□□□□ -0.75
CTNNA1-236ENST00000522792 LITAFQ99732 161 aa10.35□□□□□ -0.75
CTNNA1-236ENST00000522792 C1orf43Q9BWL3 253 aa10.35□□□□□ -0.75
CTNNA1-236ENST00000522792 SPANXB1Q9NS25 103 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms