RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 LOC100131303A0A0U1RQF7 123 aa10.06□□□□□ -0.8
SYNPO-205ENST00000522122 MIFP14174 115 aa10.06□□□□□ -0.8
SYNPO-205ENST00000522122 WFDC10AQ9H1F0 79 aa10.05□□□□□ -0.8
SYNPO-205ENST00000522122 CD164L2Q6UWJ8 174 aa10.05□□□□□ -0.8
SYNPO-205ENST00000522122 IMUPQ9GZP8 106 aa10.05□□□□□ -0.8
SYNPO-205ENST00000522122 CDC42SE2Q9NRR3 84 aa10.05□□□□□ -0.8
SYNPO-205ENST00000522122 A0A1W2PPR1 153 aa10.04□□□□□ -0.8
SYNPO-205ENST00000522122 LINC00959A0A1B0GUT2 108 aa10.04□□□□□ -0.8
SYNPO-205ENST00000522122 M0QXV9 152 aa10.04□□□□□ -0.8
SYNPO-205ENST00000522122 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
SYNPO-205ENST00000522122 LINC00242Q5T6M2 205 aa10.03□□□□□ -0.8
SYNPO-205ENST00000522122 FAM110AQ9BQ89 295 aa10.03□□□□□ -0.8
SYNPO-205ENST00000522122 ENHOQ6UWT2 76 aa10.03□□□□□ -0.8
SYNPO-205ENST00000522122 C3orf22Q8N5N4 141 aa10.03□□□□□ -0.8
SYNPO-205ENST00000522122 SMIM11BQ8TCY0 68 aa10.02□□□□□ -0.8
SYNPO-205ENST00000522122 CHD9Q3L8U1 2897 aa10.02□□□□□ -0.8
SYNPO-205ENST00000522122 FAM19A4Q96LR4 140 aa10.02□□□□□ -0.81
SYNPO-205ENST00000522122 KIF25-AS1Q9Y6Z4 181 aa10.02□□□□□ -0.81
SYNPO-205ENST00000522122 PRB2P02812 416 aaPredicted RBP10.02□□□□□ -0.81
SYNPO-205ENST00000522122 ODF3L2Q3SX64 289 aa10.02□□□□□ -0.81
SYNPO-205ENST00000522122 Q6Q795 121 aa10.02□□□□□ -0.81
SYNPO-205ENST00000522122 PRO0461Q9UI25 63 aa10.01□□□□□ -0.81
SYNPO-205ENST00000522122 CHD8Q9HCK8 2581 aa10.01□□□□□ -0.81
SYNPO-205ENST00000522122 DEFB131BA0A096LNP1 70 aa10.01□□□□□ -0.81
SYNPO-205ENST00000522122 SPTBN4Q9H254 2564 aa10.01□□□□□ -0.81
SYNPO-205ENST00000522122 IGKV2-24A0A0C4DH68 120 aa10.01□□□□□ -0.81
SYNPO-205ENST00000522122 ZNF843Q8N446 348 aa10.01□□□□□ -0.81
SYNPO-205ENST00000522122 KLK9Q2XQG4 91 aa10.01□□□□□ -0.81
SYNPO-205ENST00000522122 HIGD2AQ9BW72 106 aa10□□□□□ -0.81
SYNPO-205ENST00000522122 INAFM1C9JVW0 142 aa10□□□□□ -0.81
SYNPO-205ENST00000522122 C5orf42Q9H799 3197 aa10□□□□□ -0.81
SYNPO-205ENST00000522122 C5orf47Q569G3 176 aa10□□□□□ -0.81
SYNPO-205ENST00000522122 ZNF580Q9UK33 172 aa10□□□□□ -0.81
SYNPO-205ENST00000522122 Q6ZQY7 126 aa9.99□□□□□ -0.81
SYNPO-205ENST00000522122 CDIP1Q9H305 208 aa9.99□□□□□ -0.81
SYNPO-205ENST00000522122 SCXQ7RTU7 201 aa9.99□□□□□ -0.81
SYNPO-205ENST00000522122 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
SYNPO-205ENST00000522122 AMELXQ99217 191 aa9.99□□□□□ -0.81
SYNPO-205ENST00000522122 NDUFA7O95182 113 aa9.98□□□□□ -0.81
SYNPO-205ENST00000522122 SYCNQ0VAF6 134 aa9.98□□□□□ -0.81
SYNPO-205ENST00000522122 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
SYNPO-205ENST00000522122 CHCHD7Q9BUK0 85 aa9.98□□□□□ -0.81
SYNPO-205ENST00000522122 AGRNO00468 2067 aa9.98□□□□□ -0.81
SYNPO-205ENST00000522122 USP17L23D6RBM5 183 aa9.97□□□□□ -0.81
SYNPO-205ENST00000522122 COL27A1Q8IZC6 1860 aaPredicted RBP9.97□□□□□ -0.81
SYNPO-205ENST00000522122 FAM240AA0A1B0GVK7 77 aa9.97□□□□□ -0.81
SYNPO-205ENST00000522122 LELP1Q5T871 98 aa9.97□□□□□ -0.81
SYNPO-205ENST00000522122 Q8IZM0 81 aa9.97□□□□□ -0.81
SYNPO-205ENST00000522122 LINC00315P59091 139 aa9.96□□□□□ -0.81
SYNPO-205ENST00000522122 CCKP06307 115 aa9.96□□□□□ -0.81
SYNPO-205ENST00000522122 SERP2Q8N6R1 65 aa9.96□□□□□ -0.81
SYNPO-205ENST00000522122 MTORP42345 2549 aa9.96□□□□□ -0.82
SYNPO-205ENST00000522122 NDUFC2O95298 119 aa9.96□□□□□ -0.82
SYNPO-205ENST00000522122 SMCPP49901 116 aaPredicted RBP9.96□□□□□ -0.82
SYNPO-205ENST00000522122 HILS1P60008 231 aa9.96□□□□□ -0.82
SYNPO-205ENST00000522122 KIR2DL5BQ8NHK3 375 aa9.96□□□□□ -0.82
SYNPO-205ENST00000522122 H0Y9J4 135 aa9.95□□□□□ -0.82
SYNPO-205ENST00000522122 C14orf177Q52M58 125 aa9.95□□□□□ -0.82
SYNPO-205ENST00000522122 BRCA2P51587 3418 aa9.95□□□□□ -0.82
SYNPO-205ENST00000522122 FAM236DA0A1B0GTK5 79 aa9.95□□□□□ -0.82
SYNPO-205ENST00000522122 FAM236CP0DP71 79 aa9.95□□□□□ -0.82
SYNPO-205ENST00000522122 COX17Q14061 63 aa9.95□□□□□ -0.82
SYNPO-205ENST00000522122 KLK5Q9Y337 293 aaPredicted RBP9.95□□□□□ -0.82
SYNPO-205ENST00000522122 ADAMTSL4-AS1Q5T5F5 129 aa9.94□□□□□ -0.82
SYNPO-205ENST00000522122 CCDC179H3BU77 68 aa9.94□□□□□ -0.82
SYNPO-205ENST00000522122 B9D2Q9BPU9 175 aa9.94□□□□□ -0.82
SYNPO-205ENST00000522122 C1orf158Q8N1D5 194 aa9.94□□□□□ -0.82
SYNPO-205ENST00000522122 LRRK2Q5S007 2527 aa9.94□□□□□ -0.82
SYNPO-205ENST00000522122 CLUHP3Q96NS8 147 aa9.93□□□□□ -0.82
SYNPO-205ENST00000522122 LINC00694P0DN24 101 aa9.93□□□□□ -0.82
SYNPO-205ENST00000522122 COX6A2Q02221 97 aa9.93□□□□□ -0.82
SYNPO-205ENST00000522122 KPRPQ5T749 579 aaPredicted RBP9.93□□□□□ -0.82
SYNPO-205ENST00000522122 CSDC2Q9Y534 153 aaKnown RBP9.93□□□□□ -0.82
SYNPO-205ENST00000522122 M0R378 163 aa9.92□□□□□ -0.82
SYNPO-205ENST00000522122 COX7CP15954 63 aa9.92□□□□□ -0.82
SYNPO-205ENST00000522122 FAM19A1Q7Z5A9 133 aa9.92□□□□□ -0.82
SYNPO-205ENST00000522122 MUC7Q8TAX7 377 aa9.92□□□□□ -0.82
SYNPO-205ENST00000522122 RPL28P46779 137 aaKnown RBP9.91□□□□□ -0.82
SYNPO-205ENST00000522122 A0A087WZ39 114 aa9.91□□□□□ -0.82
SYNPO-205ENST00000522122 LY6G6DO95868 133 aa9.91□□□□□ -0.82
SYNPO-205ENST00000522122 BEAN1Q3B7T3 259 aa9.91□□□□□ -0.82
SYNPO-205ENST00000522122 A0A096LNI7 61 aa9.9□□□□□ -0.82
SYNPO-205ENST00000522122 SBSPONQ8IVN8 264 aa9.9□□□□□ -0.82
SYNPO-205ENST00000522122 IGKV2-28A0A075B6P5 120 aa9.9□□□□□ -0.82
SYNPO-205ENST00000522122 CYSRT1A8MQ03 144 aa9.9□□□□□ -0.82
SYNPO-205ENST00000522122 IGKV2D-28P01615 120 aa9.9□□□□□ -0.82
SYNPO-205ENST00000522122 CHKB-CPT1BH3BT56 60 aa9.9□□□□□ -0.82
SYNPO-205ENST00000522122 KRTAP10-9P60411 292 aa9.9□□□□□ -0.82
SYNPO-205ENST00000522122 IGLV1-51P01701 117 aa9.9□□□□□ -0.83
SYNPO-205ENST00000522122 FAM19A5Q7Z5A7 132 aaPredicted RBP9.9□□□□□ -0.83
SYNPO-205ENST00000522122 IGLV4-60A0A075B6I1 120 aa9.89□□□□□ -0.83
SYNPO-205ENST00000522122 C3orf84H3BNL1 204 aa9.89□□□□□ -0.83
SYNPO-205ENST00000522122 Q6JHZ5 121 aa9.89□□□□□ -0.83
SYNPO-205ENST00000522122 TRANK1O15050 2925 aa9.89□□□□□ -0.83
SYNPO-205ENST00000522122 ZNF73O43830 326 aaPredicted RBP9.89□□□□□ -0.83
SYNPO-205ENST00000522122 Q6ZSN1 163 aa9.89□□□□□ -0.83
SYNPO-205ENST00000522122 UNQ6190/PRO20217Q6UXQ8 127 aa9.88□□□□□ -0.83
SYNPO-205ENST00000522122 PRRC2CQ9Y520 2896 aaKnown RBP9.87□□□□□ -0.83
SYNPO-205ENST00000522122 SHISA2Q6UWI4 295 aa9.87□□□□□ -0.83
SYNPO-205ENST00000522122 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms