RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
SREK1-209ENST00000520953 AMELXQ99217 191 aa10.3□□□□□ -0.76
SREK1-209ENST00000520953 A0A0J9YXV3 536 aa10.29□□□□□ -0.76
SREK1-209ENST00000520953 TMEM262E9PQX1 116 aa10.29□□□□□ -0.76
SREK1-209ENST00000520953 UBE2L6O14933 153 aa10.29□□□□□ -0.76
SREK1-209ENST00000520953 SH2D6Q7Z4S9 175 aa10.29□□□□□ -0.76
SREK1-209ENST00000520953 C15orf53Q8NAA6 179 aa10.29□□□□□ -0.76
SREK1-209ENST00000520953 HIST1H4GQ99525 98 aa10.29□□□□□ -0.76
SREK1-209ENST00000520953 NAA38Q9BRA0 125 aaKnown RBP10.29□□□□□ -0.76
SREK1-209ENST00000520953 APLNQ9ULZ1 77 aa10.29□□□□□ -0.76
SREK1-209ENST00000520953 LINC00588Q9Y4M8 146 aa10.29□□□□□ -0.76
SREK1-209ENST00000520953 VPS13DQ5THJ4 4388 aa10.29□□□□□ -0.76
SREK1-209ENST00000520953 H3BUT2 72 aa10.28□□□□□ -0.76
SREK1-209ENST00000520953 K7ERJ3 54 aa10.28□□□□□ -0.76
SREK1-209ENST00000520953 SMIM13P0DJ93 91 aa10.28□□□□□ -0.76
SREK1-209ENST00000520953 ZNF22P17026 224 aaPredicted RBP10.28□□□□□ -0.76
SREK1-209ENST00000520953 NHP2Q9NX24 153 aaKnown RBP10.28□□□□□ -0.76
SREK1-209ENST00000520953 SPANXA1Q9NS26 97 aa10.28□□□□□ -0.76
SREK1-209ENST00000520953 TMEM223A0PJW6 202 aa10.27□□□□□ -0.77
SREK1-209ENST00000520953 RBX1P62877 108 aa10.27□□□□□ -0.77
SREK1-209ENST00000520953 NUPR2A6NF83 97 aa10.26□□□□□ -0.77
SREK1-209ENST00000520953 SCGB1D4Q6XE38 83 aa10.26□□□□□ -0.77
SREK1-209ENST00000520953 J3QQQ9 107 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 TIRAPP58753 221 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 MRPS36P82909 103 aaKnown RBP10.25□□□□□ -0.77
SREK1-209ENST00000520953 DGAT2L7PQ6IED9 249 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 CLPSL2Q6UWE3 100 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 CDC42SE2Q9NRR3 84 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 IGHV3-30P01768 117 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 IGHV3-33P01772 117 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 IGHV3-30-3P0DP02 117 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 IGHV3-30-5P0DP03 117 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 OR5A1Q8NGJ0 315 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 MUC7Q8TAX7 377 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 TIMM21Q9BVV7 248 aa10.25□□□□□ -0.77
SREK1-209ENST00000520953 IGKV3OR2-268A0A0C4DH90 116 aa10.24□□□□□ -0.77
SREK1-209ENST00000520953 LEPROTO15243 131 aa10.24□□□□□ -0.77
SREK1-209ENST00000520953 IGHV3-64A0A075B6Q5 118 aa10.24□□□□□ -0.77
SREK1-209ENST00000520953 H7C423 109 aa10.24□□□□□ -0.77
SREK1-209ENST00000520953 A0A1W2PPM0 123 aa10.23□□□□□ -0.77
SREK1-209ENST00000520953 LGALS3P17931 250 aaKnown RBP10.23□□□□□ -0.77
SREK1-209ENST00000520953 WWC2-AS2Q96NR7 200 aa10.23□□□□□ -0.77
SREK1-209ENST00000520953 KLK5Q9Y337 293 aaPredicted RBP10.23□□□□□ -0.77
SREK1-209ENST00000520953 CSDC2Q9Y534 153 aaKnown RBP10.22□□□□□ -0.77
SREK1-209ENST00000520953 GAGE10A6NGK3 116 aa10.22□□□□□ -0.77
SREK1-209ENST00000520953 TMEM101Q96IK0 257 aa10.22□□□□□ -0.77
SREK1-209ENST00000520953 A0A1B0GWB2 263 aa10.21□□□□□ -0.77
SREK1-209ENST00000520953 CCL18P55774 89 aa10.21□□□□□ -0.77
SREK1-209ENST00000520953 DNAH10Q8IVF4 4471 aa10.21□□□□□ -0.78
SREK1-209ENST00000520953 TRAV13-1A0A0B4J241 112 aa10.21□□□□□ -0.78
SREK1-209ENST00000520953 A0A1B0GUV1 79 aa10.21□□□□□ -0.78
SREK1-209ENST00000520953 TINCRA0A1B0GVN0 87 aa10.21□□□□□ -0.78
SREK1-209ENST00000520953 K7EP34 96 aa10.21□□□□□ -0.78
SREK1-209ENST00000520953 SRSF9Q13242 221 aaKnown RBP eCLIP10.21□□□□□ -0.78
SREK1-209ENST00000520953 LINC00269Q8N2A0 174 aa10.21□□□□□ -0.78
SREK1-209ENST00000520953 ANGP03950 147 aaKnown RBP10.2□□□□□ -0.78
SREK1-209ENST00000520953 UBE2D1P51668 147 aa10.19□□□□□ -0.78
SREK1-209ENST00000520953 GTF2H5Q6ZYL4 71 aa10.19□□□□□ -0.78
SREK1-209ENST00000520953 SPANXB1Q9NS25 103 aaPredicted RBP10.19□□□□□ -0.78
SREK1-209ENST00000520953 KLK12Q9UKR0 248 aa10.19□□□□□ -0.78
SREK1-209ENST00000520953 KMT2AQ03164 3969 aa10.19□□□□□ -0.78
SREK1-209ENST00000520953 TRAV8-3A0A0A6YYJ7 113 aa10.19□□□□□ -0.78
SREK1-209ENST00000520953 SPCS1Q9Y6A9 102 aa10.19□□□□□ -0.78
SREK1-209ENST00000520953 FABP2P12104 132 aa10.18□□□□□ -0.78
SREK1-209ENST00000520953 COX6A2Q02221 97 aa10.18□□□□□ -0.78
SREK1-209ENST00000520953 C10orf126Q8N4M7 172 aa10.17□□□□□ -0.78
SREK1-209ENST00000520953 IGLV10-54A0A075B6I4 117 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 IGHV1-58A0A0C4DH39 117 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 CASC10Q5T4H9 136 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 UBE2DNLQ8IWF7 75 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 TMEM238LA0A1B0GVL6 79 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 A6NJY4 79 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 SPINK8P0C7L1 97 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 DNAH10OSP0CZ25 163 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 LINC01556Q5JQF7 62 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 LINC00242Q5T6M2 205 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 ENHOQ6UWT2 76 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 UPK3BQ9BT76 320 aa10.16□□□□□ -0.78
SREK1-209ENST00000520953 GEMIN7Q9H840 131 aaKnown RBP10.16□□□□□ -0.78
SREK1-209ENST00000520953 REG3AQ06141 175 aa10.15□□□□□ -0.78
SREK1-209ENST00000520953 SMAGPQ0VAQ4 97 aa10.15□□□□□ -0.78
SREK1-209ENST00000520953 Q9H8V8 135 aa10.15□□□□□ -0.78
SREK1-209ENST00000520953 CDKN2A-AS1Q9UH64 79 aa10.15□□□□□ -0.78
SREK1-209ENST00000520953 IGLV5-45A0A087WSX0 123 aa10.15□□□□□ -0.79
SREK1-209ENST00000520953 LINC00959A0A1B0GUT2 108 aa10.15□□□□□ -0.79
SREK1-209ENST00000520953 UBE2WQ96B02 151 aa10.15□□□□□ -0.79
SREK1-209ENST00000520953 KRTAP1-5Q9BYS1 174 aa10.15□□□□□ -0.79
SREK1-209ENST00000520953 A0A0J9YXY3 114 aa10.14□□□□□ -0.79
SREK1-209ENST00000520953 DNAH2Q9P225 4427 aa10.13□□□□□ -0.79
SREK1-209ENST00000520953 ALMS1Q8TCU4 4167 aa10.13□□□□□ -0.79
SREK1-209ENST00000520953 PRR34Q9NV39 138 aa10.13□□□□□ -0.79
SREK1-209ENST00000520953 XCL1P47992 114 aa10.12□□□□□ -0.79
SREK1-209ENST00000520953 FAM19A3Q7Z5A8 133 aa10.12□□□□□ -0.79
SREK1-209ENST00000520953 APOMO95445 188 aa10.12□□□□□ -0.79
SREK1-209ENST00000520953 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
SREK1-209ENST00000520953 NDUFA12Q9UI09 145 aa10.12□□□□□ -0.79
SREK1-209ENST00000520953 HERVK_113P63121 156 aa10.11□□□□□ -0.79
SREK1-209ENST00000520953 LITAFQ99732 161 aa10.11□□□□□ -0.79
SREK1-209ENST00000520953 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
SREK1-209ENST00000520953 Q9HAA7 133 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms