RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 C8orf87E5RJ46 101 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 H3BT86 120 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 SSSCA1O60232 199 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 IGKCP01834 107 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 APCSP02743 223 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 ARL16Q0P5N6 197 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 LINC00305Q7Z4B0 112 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 ZNF575Q86XF7 245 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 NEXN-AS1Q8NBZ9 246 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 Q9H3A6 140 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 C11orf1Q9H5F2 150 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 SLC39A9Q9NUM3 307 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 HHLA3Q9XRX5 114 aa3.92□□□□□ -1.78
CTNNA1-219ENST00000520158 ABCA13Q86UQ4 5058 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 TRBV7-6A0A0J9YX20 115 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 hDV102S1A0JD36 115 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 PRAC2D3DTV9 90 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 F2Z2F3 143 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 TCL1BO95988 128 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 HBG1P69891 147 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 HBG2P69892 147 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 LAGE3Q14657 143 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 MORN5Q5VZ52 161 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 COPS9Q8WXC6 57 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 DSCR8Q96T75 97 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 MGST2Q99735 147 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 DPH3P1Q9H4G8 78 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 NOP10Q9NPE3 64 aaKnown RBP3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 TMEM14CQ9P0S9 112 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 HIGD1BQ9P298 99 aa3.91□□□□□ -1.78
CTNNA1-219ENST00000520158 C16orf90A8MZG2 172 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 KLLNB2CW77 178 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 COX7A2P2O60397 106 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 TCRAP04437 139 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 ERCC8Q13216 396 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 PDE6HQ13956 83 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 ESRGQ1W209 222 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 C10orf113Q5VZT2 155 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 COX8CQ7Z4L0 72 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 Q8N1X5 172 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 C11orf72Q8NBR9 251 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 LINC01600Q96MT4 127 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 SMIM7Q9BQ49 75 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 LRP1BQ9NZR2 4599 aa3.9□□□□□ -1.79
CTNNA1-219ENST00000520158 hADV29S1A0JD25 119 aa3.89□□□□□ -1.79
CTNNA1-219ENST00000520158 SCGB1C2P0DMR2 95 aa3.89□□□□□ -1.79
CTNNA1-219ENST00000520158 HTN1P15515 57 aa3.89□□□□□ -1.79
CTNNA1-219ENST00000520158 CXCL5P42830 114 aa3.89□□□□□ -1.79
CTNNA1-219ENST00000520158 NPC2P61916 151 aa3.89□□□□□ -1.79
CTNNA1-219ENST00000520158 LINC01545Q5VT33 79 aa3.89□□□□□ -1.79
CTNNA1-219ENST00000520158 C9orf47Q6ZRZ4 202 aa3.89□□□□□ -1.79
CTNNA1-219ENST00000520158 VSIG2Q96IQ7 327 aa3.89□□□□□ -1.79
CTNNA1-219ENST00000520158 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
CTNNA1-219ENST00000520158 TP73-AS1Q9UF72 201 aa3.89□□□□□ -1.79
CTNNA1-219ENST00000520158 A0A096LPF7 62 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 TRAV8-4A0A0B4J246 113 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 IGHV1-58A0A0C4DH39 117 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 A0A1B0GXF2 115 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 SNURFLB1AK76 121 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 ATOX1O00244 68 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 SPINK4O60575 86 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 MRPS36P82909 103 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 MIC13Q5XKP0 118 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 Q6ZRN7 208 aaPredicted RBP3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 Q6ZTI0 123 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 TMEM252Q8N6L7 170 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 PAXXQ9BUH6 204 aa3.88□□□□□ -1.79
CTNNA1-219ENST00000520158 APOBP04114 4563 aaKnown RBP3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 TRAV12-3A0A0B4J271 114 aa3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 A0A0J9YY99 117 aa3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 CST7O76096 145 aa3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 FAM19A2Q8N3H0 131 aa3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 ZFAND2AQ8N6M9 145 aa3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 MAPKAPK5-AS1Q8N8E1 139 aa3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 FAM167A-AS1Q96KT0 104 aa3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 IL36BQ9NZH7 164 aa3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 ZNF492Q9P255 531 aa3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 GNG13Q9P2W3 67 aa3.87□□□□□ -1.79
CTNNA1-219ENST00000520158 TRGV11A0A075B6L2 103 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 TRAV8-1A0A0A6YYK1 113 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 IGHV1-24A0A0C4DH33 117 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 M0R3E3 92 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 NDUFS5O43920 106 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 KRTAP10-2P60368 255 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 CENPWQ5EE01 88 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 SCGB1D4Q6XE38 83 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 FP248Q71RG6 208 aaPredicted RBP3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 LYPD1Q8N2G4 141 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 CHAC1Q9BUX1 264 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 NPCDR1Q9BY65 106 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 PRO0255Q9UI72 69 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 TIMM9Q9Y5J7 89 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 LENEPQ9Y5L5 61 aa3.86□□□□□ -1.79
CTNNA1-219ENST00000520158 TRGV2A0A075B6R0 118 aa3.85□□□□□ -1.79
CTNNA1-219ENST00000520158 IGHV1OR15-1A0A075B7D0 117 aa3.85□□□□□ -1.79
CTNNA1-219ENST00000520158 HLA-DQA1P01909 254 aa3.85□□□□□ -1.79
CTNNA1-219ENST00000520158 PRB4P10163 310 aaPredicted RBP3.85□□□□□ -1.79
CTNNA1-219ENST00000520158 RNASE4P34096 147 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms