RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 CDPF1Q6NVV7 123 aa5.17□□□□□ -1.58
SDCBP-206ENST00000519115 LINC01561Q8N1V8 128 aa5.17□□□□□ -1.58
SDCBP-206ENST00000519115 UPK3BQ9BT76 320 aa5.17□□□□□ -1.58
SDCBP-206ENST00000519115 HERC2O95714 4834 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 IGLV5-45A0A087WSX0 123 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 IGHV3-38A0A0C4DH36 116 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 TSTD3H0UI37 97 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 SIVA1O15304 175 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 HERVK_113P63121 156 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 C1orf134Q5TEV5 83 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 WFDC10BQ8IUB3 73 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 PMCHL2Q9BQD1 86 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 CHCHD5Q9BSY4 110 aa5.16□□□□□ -1.58
SDCBP-206ENST00000519115 MRPL35Q9NZE8 188 aaKnown RBP5.16□□□□□ -1.58
SDCBP-206ENST00000519115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.15□□□□□ -1.59
SDCBP-206ENST00000519115 TRAV8-4A0A0B4J246 113 aa5.15□□□□□ -1.59
SDCBP-206ENST00000519115 IGKV2-29A2NJV5 120 aaPredicted RBP5.15□□□□□ -1.59
SDCBP-206ENST00000519115 UBE2D1P51668 147 aa5.15□□□□□ -1.59
SDCBP-206ENST00000519115 HERVK_113P61574 105 aa5.15□□□□□ -1.59
SDCBP-206ENST00000519115 TTC32Q5I0X7 151 aa5.15□□□□□ -1.59
SDCBP-206ENST00000519115 BOD1L2Q8IYS8 172 aa5.15□□□□□ -1.59
SDCBP-206ENST00000519115 FRAS1Q86XX4 4008 aa5.14□□□□□ -1.59
SDCBP-206ENST00000519115 IGLV4-69A0A075B6H9 119 aa5.14□□□□□ -1.59
SDCBP-206ENST00000519115 E9PLD3 99 aa5.14□□□□□ -1.59
SDCBP-206ENST00000519115 H3BRM9 83 aa5.14□□□□□ -1.59
SDCBP-206ENST00000519115 ZNF561-AS1K7EIQ3 104 aa5.14□□□□□ -1.59
SDCBP-206ENST00000519115 RBX1P62877 108 aa5.14□□□□□ -1.59
SDCBP-206ENST00000519115 C6orf223Q8N319 242 aa5.14□□□□□ -1.59
SDCBP-206ENST00000519115 MIEN1Q9BRT3 115 aa5.14□□□□□ -1.59
SDCBP-206ENST00000519115 PRR34Q9NV39 138 aa5.14□□□□□ -1.59
SDCBP-206ENST00000519115 TMEM262E9PQX1 116 aa5.13□□□□□ -1.59
SDCBP-206ENST00000519115 DNAH10OSP0CZ25 163 aa5.13□□□□□ -1.59
SDCBP-206ENST00000519115 SPATA45Q537H7 98 aa5.13□□□□□ -1.59
SDCBP-206ENST00000519115 LINC01556Q5JQF7 62 aa5.13□□□□□ -1.59
SDCBP-206ENST00000519115 ZC2HC1BQ5TFG8 222 aa5.13□□□□□ -1.59
SDCBP-206ENST00000519115 SFTA2Q6UW10 78 aa5.13□□□□□ -1.59
SDCBP-206ENST00000519115 LINC00336Q6ZUF6 198 aa5.13□□□□□ -1.59
SDCBP-206ENST00000519115 UQCR10Q9UDW1 63 aa5.13□□□□□ -1.59
SDCBP-206ENST00000519115 DNAH10Q8IVF4 4471 aa5.13□□□□□ -1.59
SDCBP-206ENST00000519115 IGHV3OR16-9A0A0B4J2B5 98 aa5.12□□□□□ -1.59
SDCBP-206ENST00000519115 COX8AP10176 69 aa5.12□□□□□ -1.59
SDCBP-206ENST00000519115 NMUP48645 174 aa5.12□□□□□ -1.59
SDCBP-206ENST00000519115 GAGE6Q13070 117 aa5.12□□□□□ -1.59
SDCBP-206ENST00000519115 SS18Q15532 418 aa5.12□□□□□ -1.59
SDCBP-206ENST00000519115 LINC00242Q5T6M2 205 aa5.12□□□□□ -1.59
SDCBP-206ENST00000519115 SLC25A34Q6PIV7 304 aa5.12□□□□□ -1.59
SDCBP-206ENST00000519115 C10orf126Q8N4M7 172 aa5.12□□□□□ -1.59
SDCBP-206ENST00000519115 PLEKHB2Q96CS7 222 aa5.12□□□□□ -1.59
SDCBP-206ENST00000519115 GEMIN7Q9H840 131 aaKnown RBP5.12□□□□□ -1.59
SDCBP-206ENST00000519115 IGLV5-39A0A0G2JS06 123 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 LINC00959A0A1B0GUT2 108 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 A0A1B0GVY2 172 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 TMEM223A0PJW6 202 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 H0Y8G0 127 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 IGHV3-30P01768 117 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 IGHV3-33P01772 117 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 IGHV3-30-3P0DP02 117 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 IGHV3-30-5P0DP03 117 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 ZNF22P17026 224 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-206ENST00000519115 MIAQ16674 131 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 CD164L2Q6UWJ8 174 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 Q6ZUT4 128 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 OPRPNQ99935 248 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-206ENST00000519115 CHAC1Q9BUX1 264 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 CDIP1Q9H305 208 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 HIGD1BQ9P298 99 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 PAM16Q9Y3D7 125 aa5.11□□□□□ -1.59
SDCBP-206ENST00000519115 IGLV4-60A0A075B6I1 120 aa5.1□□□□□ -1.59
SDCBP-206ENST00000519115 A0A087WZ39 114 aa5.1□□□□□ -1.59
SDCBP-206ENST00000519115 IGHV1-58A0A0C4DH39 117 aa5.1□□□□□ -1.59
SDCBP-206ENST00000519115 A0A0J9YXV3 536 aa5.1□□□□□ -1.59
SDCBP-206ENST00000519115 LEPROTO15243 131 aa5.1□□□□□ -1.59
SDCBP-206ENST00000519115 MPV17L2Q567V2 206 aa5.1□□□□□ -1.59
SDCBP-206ENST00000519115 STPG4Q8N801 248 aa5.1□□□□□ -1.59
SDCBP-206ENST00000519115 COX11Q9Y6N1 276 aa5.1□□□□□ -1.59
SDCBP-206ENST00000519115 TRAV8-3A0A0A6YYJ7 113 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 hDV102S1A0JD36 115 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 LINC00587B1AMM8 73 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 F8WDY8 70 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 ANGP03950 147 aaKnown RBP5.09□□□□□ -1.59
SDCBP-206ENST00000519115 DDTP30046 118 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 REG3AQ06141 175 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 TMEM170BQ5T4T1 132 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 Q6ZRN7 208 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-206ENST00000519115 Q6ZVH6 145 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 ATOH7Q8N100 152 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 DEFB104AQ8WTQ1 72 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 Q9HAA7 133 aa5.09□□□□□ -1.59
SDCBP-206ENST00000519115 TRAV13-1A0A0B4J241 112 aa5.08□□□□□ -1.6
SDCBP-206ENST00000519115 IBA57-AS1B1ANH7 110 aa5.08□□□□□ -1.6
SDCBP-206ENST00000519115 J3QQQ9 107 aa5.08□□□□□ -1.6
SDCBP-206ENST00000519115 GCSHP23434 173 aa5.08□□□□□ -1.6
SDCBP-206ENST00000519115 TAL2Q16559 108 aa5.08□□□□□ -1.6
SDCBP-206ENST00000519115 MAJINQ3KP22 176 aa5.08□□□□□ -1.6
SDCBP-206ENST00000519115 LINC00269Q8N2A0 174 aa5.08□□□□□ -1.6
SDCBP-206ENST00000519115 LINC00469Q8N7U9 141 aa5.08□□□□□ -1.6
SDCBP-206ENST00000519115 PPDPFQ9H3Y8 114 aa5.08□□□□□ -1.6
SDCBP-206ENST00000519115 CDKN2A-AS1Q9UH64 79 aa5.08□□□□□ -1.6
SDCBP-206ENST00000519115 A0A0J9YXY3 114 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms