RNA–Protein interactions for RNA: ENST00000518681.5

MIB2-231, Transcript of mindbomb E3 ubiquitin protein ligase 2, human

TSL 1 (best) BASIC

Gene MIB2, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MIB2-231	ENST00000518681	HERVK_113	P63121	156 aa		13.45	□□□□□ -0.26
MIB2-231	ENST00000518681	TIRAP	P58753	221 aa		13.44	□□□□□ -0.26
MIB2-231	ENST00000518681	C3orf56	Q8N813	242 aa		13.44	□□□□□ -0.26
MIB2-231	ENST00000518681	CCDC179	H3BU77	68 aa		13.44	□□□□□ -0.26
MIB2-231	ENST00000518681	UBE2L6	O14933	153 aa		13.44	□□□□□ -0.26
MIB2-231	ENST00000518681	CCL24	O00175	119 aa		13.43	□□□□□ -0.26
MIB2-231	ENST00000518681	NDUFV3	P56181	108 aa	Known RBP	13.43	□□□□□ -0.26
MIB2-231	ENST00000518681		Q9HAA7	133 aa		13.43	□□□□□ -0.26
MIB2-231	ENST00000518681	DEFB113	Q30KQ7	82 aa		13.43	□□□□□ -0.26
MIB2-231	ENST00000518681	WFDC11	Q8NEX6	87 aa		13.43	□□□□□ -0.26
MIB2-231	ENST00000518681	IGLV5-45	A0A087WSX0	123 aa		13.42	□□□□□ -0.26
MIB2-231	ENST00000518681	IGLV5-39	A0A0G2JS06	123 aa		13.41	□□□□□ -0.26
MIB2-231	ENST00000518681	DNAJC9-AS1	A6NH13	148 aa		13.41	□□□□□ -0.26
MIB2-231	ENST00000518681	ESM1	Q9NQ30	184 aa		13.41	□□□□□ -0.26
MIB2-231	ENST00000518681	CDC42SE2	Q9NRR3	84 aa		13.41	□□□□□ -0.26
MIB2-231	ENST00000518681	FAM218A	Q96MZ4	157 aa		13.41	□□□□□ -0.26
MIB2-231	ENST00000518681	IFITM1	P13164	125 aa		13.4	□□□□□ -0.26
MIB2-231	ENST00000518681		H3BT86	120 aa		13.39	□□□□□ -0.27
MIB2-231	ENST00000518681		M0QXV9	152 aa		13.39	□□□□□ -0.27
MIB2-231	ENST00000518681		F5H768	121 aa		13.38	□□□□□ -0.27
MIB2-231	ENST00000518681	IGLV4-60	A0A075B6I1	120 aa		13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	TIMM17B	O60830	172 aa		13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	PFN2	P35080	140 aa		13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	VWF	P04275	2813 aa		13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	GIG44	P09565	113 aa	Predicted RBP	13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	CLPSL2	Q6UWE3	100 aa		13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	C5orf38	Q86SI9	138 aa		13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	MIR7-3HG	Q8N6C7	128 aa		13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	TMEM243	Q9BU79	118 aa		13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	TRGV4	A0A0C4DH28	118 aa		13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	CHCHD5	Q9BSY4	110 aa		13.37	□□□□□ -0.27
MIB2-231	ENST00000518681	TENM4	Q6N022	2769 aa		13.36	□□□□□ -0.27
MIB2-231	ENST00000518681		A0A096LPF7	62 aa		13.36	□□□□□ -0.27
MIB2-231	ENST00000518681	DEFB130B	P0DP73	79 aa		13.36	□□□□□ -0.27
MIB2-231	ENST00000518681	DEFB130A	P0DP74	79 aa		13.36	□□□□□ -0.27
MIB2-231	ENST00000518681	COX7A2L	O14548	114 aa		13.35	□□□□□ -0.27
MIB2-231	ENST00000518681	DAZ2	Q13117	558 aa	Known RBP	13.35	□□□□□ -0.27
MIB2-231	ENST00000518681	DAZ4	Q86SG3	579 aa	Known RBP	13.35	□□□□□ -0.27
MIB2-231	ENST00000518681	DAZ3	Q9NR90	486 aa	Known RBP	13.35	□□□□□ -0.27
MIB2-231	ENST00000518681	LINC00158	P58513	81 aa		13.35	□□□□□ -0.27
MIB2-231	ENST00000518681	BAALC-AS2	P0C853	105 aa		13.33	□□□□□ -0.27
MIB2-231	ENST00000518681	IL17D	Q8TAD2	202 aa		13.33	□□□□□ -0.27
MIB2-231	ENST00000518681	LINC00337	Q8N6G1	96 aa		13.32	□□□□□ -0.28
MIB2-231	ENST00000518681	ATP5G1	P05496	136 aa		13.32	□□□□□ -0.28
MIB2-231	ENST00000518681	KRTAP1-3	Q8IUG1	177 aa		13.32	□□□□□ -0.28
MIB2-231	ENST00000518681	PLAC8L1	A1L4L8	177 aa		13.31	□□□□□ -0.28
MIB2-231	ENST00000518681	SMCR5	Q8TEV8	140 aa		13.31	□□□□□ -0.28
MIB2-231	ENST00000518681	TRBV10-1	A0A0K0K1A3	114 aa		13.3	□□□□□ -0.28
MIB2-231	ENST00000518681	SHISA2	Q6UWI4	295 aa		13.3	□□□□□ -0.28
MIB2-231	ENST00000518681	COX7B2	Q8TF08	81 aa		13.3	□□□□□ -0.28
MIB2-231	ENST00000518681	ZNF843	Q8N446	348 aa		13.3	□□□□□ -0.28
MIB2-231	ENST00000518681	SND1-IT1	Q9HBX3	110 aa		13.3	□□□□□ -0.28
MIB2-231	ENST00000518681	FASN	P49327	2511 aa	Known RBP	13.29	□□□□□ -0.28
MIB2-231	ENST00000518681	CRP	P02741	224 aa		13.28	□□□□□ -0.28
MIB2-231	ENST00000518681	C9orf129	Q5T035	196 aa	Known RBP	13.28	□□□□□ -0.28
MIB2-231	ENST00000518681	GAGE2A	Q6NT46	116 aa		13.28	□□□□□ -0.28
MIB2-231	ENST00000518681	OR13C6P	Q8NH95	151 aa		13.28	□□□□□ -0.28
MIB2-231	ENST00000518681	IGKV2-28	A0A075B6P5	120 aa		13.27	□□□□□ -0.28
MIB2-231	ENST00000518681		A0A087WYN8	130 aa		13.27	□□□□□ -0.28
MIB2-231	ENST00000518681	IGKV2D-28	P01615	120 aa		13.27	□□□□□ -0.28
MIB2-231	ENST00000518681	XCL1	P47992	114 aa		13.27	□□□□□ -0.29
MIB2-231	ENST00000518681	SLPI	P03973	132 aa		13.26	□□□□□ -0.29
MIB2-231	ENST00000518681	LINC01006	Q8NI28	216 aa		13.26	□□□□□ -0.29
MIB2-231	ENST00000518681	FAM236A	A0A1B0GUQ0	79 aa		13.26	□□□□□ -0.29
MIB2-231	ENST00000518681	FAM236B	A0A1B0GV22	79 aa		13.26	□□□□□ -0.29
MIB2-231	ENST00000518681	C22orf24	Q9Y442	160 aa		13.26	□□□□□ -0.29
MIB2-231	ENST00000518681	CSDC2	Q9Y534	153 aa	Known RBP	13.26	□□□□□ -0.29
MIB2-231	ENST00000518681	DEFB4A	O15263	64 aa		13.25	□□□□□ -0.29
MIB2-231	ENST00000518681	PAX4	O43316	350 aa		13.25	□□□□□ -0.29
MIB2-231	ENST00000518681	LINC01600	Q96MT4	127 aa		13.25	□□□□□ -0.29
MIB2-231	ENST00000518681	HELZ2	Q9BYK8	2649 aa	Known RBP	13.24	□□□□□ -0.29
MIB2-231	ENST00000518681	CCL18	P55774	89 aa		13.24	□□□□□ -0.29
MIB2-231	ENST00000518681	SMIM11B	Q8TCY0	68 aa		13.24	□□□□□ -0.29
MIB2-231	ENST00000518681	TRAV25	A0A0B4J276	109 aa		13.24	□□□□□ -0.29
MIB2-231	ENST00000518681	C16orf74	Q96GX8	76 aa		13.24	□□□□□ -0.29
MIB2-231	ENST00000518681	HERV-K104	P63124	156 aa		13.23	□□□□□ -0.29
MIB2-231	ENST00000518681	PRR3	P79522	188 aa	Known RBP	13.23	□□□□□ -0.29
MIB2-231	ENST00000518681	FHL2	Q14192	279 aa		13.22	□□□□□ -0.29
MIB2-231	ENST00000518681	TRBV6-8	A0A0A6YYG3	113 aa		13.22	□□□□□ -0.29
MIB2-231	ENST00000518681	HECTD1	Q9ULT8	2610 aa		13.22	□□□□□ -0.29
MIB2-231	ENST00000518681		Q8N3U1	123 aa		13.22	□□□□□ -0.29
MIB2-231	ENST00000518681	DEFB121	Q5J5C9	76 aa		13.21	□□□□□ -0.29
MIB2-231	ENST00000518681	C14orf132	Q9NPU4	83 aa		13.21	□□□□□ -0.29
MIB2-231	ENST00000518681	C19orf73	Q9NVV2	129 aa		13.2	□□□□□ -0.3
MIB2-231	ENST00000518681	ANK3	Q12955	4377 aa	Known RBP	13.2	□□□□□ -0.3
MIB2-231	ENST00000518681	IGLV10-54	A0A075B6I4	117 aa		13.19	□□□□□ -0.3
MIB2-231	ENST00000518681	LECT2	O14960	151 aa		13.19	□□□□□ -0.3
MIB2-231	ENST00000518681	C6orf226	Q5I0X4	101 aa		13.19	□□□□□ -0.3
MIB2-231	ENST00000518681	FAM19A3	Q7Z5A8	133 aa		13.19	□□□□□ -0.3
MIB2-231	ENST00000518681	SVIP	Q8NHG7	77 aa		13.19	□□□□□ -0.3
MIB2-231	ENST00000518681	COPS9	Q8WXC6	57 aa		13.19	□□□□□ -0.3
MIB2-231	ENST00000518681	IGHV3OR16-9	A0A0B4J2B5	98 aa		13.19	□□□□□ -0.3
MIB2-231	ENST00000518681	DNAL4	O96015	105 aa		13.19	□□□□□ -0.3
MIB2-231	ENST00000518681		Q6Q795	121 aa		13.19	□□□□□ -0.3
MIB2-231	ENST00000518681	GYPE	P15421	78 aa		13.19	□□□□□ -0.3
MIB2-231	ENST00000518681	MAL	P21145	153 aa		13.18	□□□□□ -0.3
MIB2-231	ENST00000518681	CSNK1G2-AS1	Q8NCQ2	148 aa		13.18	□□□□□ -0.3
MIB2-231	ENST00000518681	PDZD2	O15018	2839 aa		13.18	□□□□□ -0.3
MIB2-231	ENST00000518681	TRAV13-2	A0A0B4J235	113 aa		13.18	□□□□□ -0.3
MIB2-231	ENST00000518681	FAM240A	A0A1B0GVK7	77 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms