RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 IGHV3-30-3P0DP02 117 aa12.1□□□□□ -0.47
TFF3-204ENST00000518498 IGHV3-30-5P0DP03 117 aa12.1□□□□□ -0.47
TFF3-204ENST00000518498 IGLV5-52A0A0A0MRZ9 124 aa12.09□□□□□ -0.47
TFF3-204ENST00000518498 SYS1-DBNDD2H3BUS1 97 aa12.09□□□□□ -0.47
TFF3-204ENST00000518498 KRTDAPP60985 99 aa12.09□□□□□ -0.47
TFF3-204ENST00000518498 PET117Q6UWS5 81 aa12.09□□□□□ -0.47
TFF3-204ENST00000518498 OR10D4PQ8NGN7 298 aa12.09□□□□□ -0.47
TFF3-204ENST00000518498 OPRPNQ99935 248 aaPredicted RBP12.09□□□□□ -0.47
TFF3-204ENST00000518498 C20orf202A1L168 122 aa12.08□□□□□ -0.48
TFF3-204ENST00000518498 CCL25O15444 150 aa12.08□□□□□ -0.48
TFF3-204ENST00000518498 C3orf79P0CE67 100 aa12.08□□□□□ -0.48
TFF3-204ENST00000518498 AKR1D1P51857 326 aa12.08□□□□□ -0.48
TFF3-204ENST00000518498 FAM104AQ969W3 186 aa12.08□□□□□ -0.48
TFF3-204ENST00000518498 LRCOL1A6NCL2 159 aa12.07□□□□□ -0.48
TFF3-204ENST00000518498 CRPP02741 224 aa12.07□□□□□ -0.48
TFF3-204ENST00000518498 HAMPP81172 84 aa12.07□□□□□ -0.48
TFF3-204ENST00000518498 NTN5Q8WTR8 489 aaPredicted RBP12.07□□□□□ -0.48
TFF3-204ENST00000518498 CST9LQ9H4G1 147 aa12.07□□□□□ -0.48
TFF3-204ENST00000518498 KLK12Q9UKR0 248 aa12.07□□□□□ -0.48
TFF3-204ENST00000518498 H0Y8G0 127 aa12.06□□□□□ -0.48
TFF3-204ENST00000518498 SEC11AP67812 179 aa12.06□□□□□ -0.48
TFF3-204ENST00000518498 REG3AQ06141 175 aa12.06□□□□□ -0.48
TFF3-204ENST00000518498 LINC00269Q8N2A0 174 aa12.06□□□□□ -0.48
TFF3-204ENST00000518498 PRR34Q9NV39 138 aa12.06□□□□□ -0.48
TFF3-204ENST00000518498 DMBT1Q9UGM3 2413 aaPredicted RBP12.06□□□□□ -0.48
TFF3-204ENST00000518498 RNASE13Q5GAN3 156 aaKnown RBP12.05□□□□□ -0.48
TFF3-204ENST00000518498 Q8N3U1 123 aa12.05□□□□□ -0.48
TFF3-204ENST00000518498 CHTOPQ9Y3Y2 248 aaKnown RBP12.05□□□□□ -0.48
TFF3-204ENST00000518498 FAT1Q14517 4588 aa12.05□□□□□ -0.48
TFF3-204ENST00000518498 IBA57-AS1B1ANH7 110 aa12.04□□□□□ -0.48
TFF3-204ENST00000518498 SS18Q15532 418 aa12.04□□□□□ -0.48
TFF3-204ENST00000518498 TRAV8-4A0A0B4J246 113 aa12.03□□□□□ -0.48
TFF3-204ENST00000518498 F8VRH5 84 aa12.03□□□□□ -0.48
TFF3-204ENST00000518498 UBE2D1P51668 147 aa12.03□□□□□ -0.48
TFF3-204ENST00000518498 ODF1Q14990 250 aa12.03□□□□□ -0.48
TFF3-204ENST00000518498 MIAQ16674 131 aa12.03□□□□□ -0.48
TFF3-204ENST00000518498 LINC01545Q5VT33 79 aa12.03□□□□□ -0.48
TFF3-204ENST00000518498 Q8N814 137 aa12.03□□□□□ -0.48
TFF3-204ENST00000518498 SRRM2Q9UQ35 2752 aaKnown RBP12.02□□□□□ -0.48
TFF3-204ENST00000518498 TRAV8-3A0A0A6YYJ7 113 aa12.02□□□□□ -0.49
TFF3-204ENST00000518498 TRAV13-1A0A0B4J241 112 aa12.02□□□□□ -0.49
TFF3-204ENST00000518498 IGKV3OR2-268A0A0C4DH90 116 aa12.02□□□□□ -0.49
TFF3-204ENST00000518498 LINC00959A0A1B0GUT2 108 aa12.02□□□□□ -0.49
TFF3-204ENST00000518498 J3QL48 77 aa12.02□□□□□ -0.49
TFF3-204ENST00000518498 ZC2HC1BQ5TFG8 222 aa12.02□□□□□ -0.49
TFF3-204ENST00000518498 FAM19A3Q7Z5A8 133 aa12.02□□□□□ -0.49
TFF3-204ENST00000518498 UBE2WQ96B02 151 aa12.02□□□□□ -0.49
TFF3-204ENST00000518498 PLNP26678 52 aa12.01□□□□□ -0.49
TFF3-204ENST00000518498 RMI2Q96E14 147 aa12.01□□□□□ -0.49
TFF3-204ENST00000518498 Q9HAA7 133 aa12.01□□□□□ -0.49
TFF3-204ENST00000518498 VPS13BQ7Z7G8 4022 aa12.01□□□□□ -0.49
TFF3-204ENST00000518498 TINCRA0A1B0GVN0 87 aa12□□□□□ -0.49
TFF3-204ENST00000518498 DPM2O94777 84 aa12□□□□□ -0.49
TFF3-204ENST00000518498 IGLC3P0DOY3 106 aa12□□□□□ -0.49
TFF3-204ENST00000518498 HERVK_113P63121 156 aa12□□□□□ -0.49
TFF3-204ENST00000518498 CLPSL2Q6UWE3 100 aa12□□□□□ -0.49
TFF3-204ENST00000518498 ENHOQ6UWT2 76 aa12□□□□□ -0.49
TFF3-204ENST00000518498 GEMIN7Q9H840 131 aaKnown RBP12□□□□□ -0.49
TFF3-204ENST00000518498 MRPL35Q9NZE8 188 aaKnown RBP12□□□□□ -0.49
TFF3-204ENST00000518498 FAM30AQ9NZY2 134 aa12□□□□□ -0.49
TFF3-204ENST00000518498 LOC105371267A0A1B0GV96 52 aa11.99□□□□□ -0.49
TFF3-204ENST00000518498 SCGB1D1O95968 90 aa11.99□□□□□ -0.49
TFF3-204ENST00000518498 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
TFF3-204ENST00000518498 IGKCP01834 107 aa11.98□□□□□ -0.49
TFF3-204ENST00000518498 JOSD1Q15040 202 aaPredicted RBP11.98□□□□□ -0.49
TFF3-204ENST00000518498 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
TFF3-204ENST00000518498 LINC00242Q5T6M2 205 aa11.97□□□□□ -0.49
TFF3-204ENST00000518498 CHAC1Q9BUX1 264 aa11.97□□□□□ -0.49
TFF3-204ENST00000518498 C1orf43Q9BWL3 253 aa11.97□□□□□ -0.49
TFF3-204ENST00000518498 TM2D2Q9BX73 214 aa11.97□□□□□ -0.49
TFF3-204ENST00000518498 COX11Q9Y6N1 276 aa11.97□□□□□ -0.49
TFF3-204ENST00000518498 PLA2G1BP04054 148 aaKnown RBP11.96□□□□□ -0.49
TFF3-204ENST00000518498 CD164L2Q6UWJ8 174 aa11.96□□□□□ -0.49
TFF3-204ENST00000518498 CHCHD10Q8WYQ3 142 aaPredicted RBP11.96□□□□□ -0.49
TFF3-204ENST00000518498 MYCBP2O75592 4640 aa11.95□□□□□ -0.5
TFF3-204ENST00000518498 H3BRM9 83 aa11.95□□□□□ -0.5
TFF3-204ENST00000518498 PMCHL2Q9BQD1 86 aa11.95□□□□□ -0.5
TFF3-204ENST00000518498 FLG2Q5D862 2391 aaPredicted RBP11.94□□□□□ -0.5
TFF3-204ENST00000518498 IGLV5-45A0A087WSX0 123 aa11.94□□□□□ -0.5
TFF3-204ENST00000518498 C11orf86A6NJI1 115 aa11.94□□□□□ -0.5
TFF3-204ENST00000518498 XCL1P47992 114 aa11.94□□□□□ -0.5
TFF3-204ENST00000518498 IGLV10-54A0A075B6I4 117 aa11.93□□□□□ -0.5
TFF3-204ENST00000518498 IGKV2D-24A0A075B6R9 120 aa11.93□□□□□ -0.5
TFF3-204ENST00000518498 LINC00469Q8N7U9 141 aa11.93□□□□□ -0.5
TFF3-204ENST00000518498 TMEM170BQ5T4T1 132 aa11.92□□□□□ -0.5
TFF3-204ENST00000518498 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
TFF3-204ENST00000518498 IGHV3OR16-9A0A0B4J2B5 98 aa11.91□□□□□ -0.5
TFF3-204ENST00000518498 GAGE12HA6NDE8 117 aa11.91□□□□□ -0.5
TFF3-204ENST00000518498 KRTAP29-1A8MX34 341 aaPredicted RBP11.91□□□□□ -0.5
TFF3-204ENST00000518498 ZNF22P17026 224 aaPredicted RBP11.91□□□□□ -0.5
TFF3-204ENST00000518498 HERVK_113P61574 105 aa11.91□□□□□ -0.5
TFF3-204ENST00000518498 COX6A2Q02221 97 aa11.91□□□□□ -0.5
TFF3-204ENST00000518498 HSBP1L1C9JCN9 74 aa11.9□□□□□ -0.5
TFF3-204ENST00000518498 COX7A2LO14548 114 aa11.9□□□□□ -0.5
TFF3-204ENST00000518498 WFDC2Q14508 124 aa11.9□□□□□ -0.5
TFF3-204ENST00000518498 PYY3Q5JQD4 70 aa11.9□□□□□ -0.5
TFF3-204ENST00000518498 Q6ZSA8 131 aa11.9□□□□□ -0.5
TFF3-204ENST00000518498 LINC00528Q8N1L1 170 aa11.9□□□□□ -0.5
TFF3-204ENST00000518498 CDKN2A-AS1Q9UH64 79 aa11.9□□□□□ -0.5
TFF3-204ENST00000518498 A0A087WZ39 114 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms