RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 EP400Q96L91 3159 aa-4.2□□□□□ -3.08
RNU6-542P-201ENST00000516405 SZT2Q5T011 3432 aa-4.21□□□□□ -3.08
RNU6-542P-201ENST00000516405 CSN2P05814 226 aa-4.21□□□□□ -3.08
RNU6-542P-201ENST00000516405 SKP1P63208 163 aa-4.21□□□□□ -3.08
RNU6-542P-201ENST00000516405 GPATCH11Q8N954 259 aa-4.21□□□□□ -3.08
RNU6-542P-201ENST00000516405 NUP35Q8NFH5 326 aa-4.21□□□□□ -3.08
RNU6-542P-201ENST00000516405 C7orf50Q9BRJ6 194 aaKnown RBP-4.21□□□□□ -3.08
RNU6-542P-201ENST00000516405 TPT1P8Q9HAU6 139 aa-4.21□□□□□ -3.08
RNU6-542P-201ENST00000516405 TCHHQ07283 1943 aa-4.21□□□□□ -3.08
RNU6-542P-201ENST00000516405 TET3O43151 1660 aa-4.22□□□□□ -3.08
RNU6-542P-201ENST00000516405 S100A6P06703 90 aa-4.22□□□□□ -3.08
RNU6-542P-201ENST00000516405 HIST1H1BP16401 226 aaKnown RBP-4.22□□□□□ -3.08
RNU6-542P-201ENST00000516405 RPL7P18124 248 aaKnown RBP-4.22□□□□□ -3.08
RNU6-542P-201ENST00000516405 UBA52P62987 128 aaKnown RBP-4.22□□□□□ -3.08
RNU6-542P-201ENST00000516405 GNG5P63218 68 aa-4.22□□□□□ -3.08
RNU6-542P-201ENST00000516405 CCL8P80075 99 aa-4.22□□□□□ -3.08
RNU6-542P-201ENST00000516405 SH3BGRL3Q9H299 93 aa-4.22□□□□□ -3.08
RNU6-542P-201ENST00000516405 CBLN4Q9NTU7 201 aa-4.22□□□□□ -3.08
RNU6-542P-201ENST00000516405 CHMP5Q9NZZ3 219 aa-4.22□□□□□ -3.08
RNU6-542P-201ENST00000516405 ARAP2Q8WZ64 1704 aa-4.22□□□□□ -3.09
RNU6-542P-201ENST00000516405 ZNF831Q5JPB2 1677 aa-4.22□□□□□ -3.09
RNU6-542P-201ENST00000516405 TRBV7-6A0A0J9YX20 115 aa-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 MMP24-AS1A0A0U1RRL7 71 aa-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 SPAARA0A1B0GVQ0 90 aa-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 TCRAP04437 139 aa-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 PTMAP06454 111 aaKnown RBP-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 RRAS2P62070 204 aaPredicted RBP-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 TMEM97Q5BJF2 176 aa-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 C5orf38Q86SI9 138 aa-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 SCN7AQ01118 1682 aa-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 MUC3AQ02505 3323 aa-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 CEP170BQ9Y4F5 1589 aaPredicted RBP-4.23□□□□□ -3.09
RNU6-542P-201ENST00000516405 CEP152O94986 1710 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 MYOM1P52179 1685 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 PBRM1Q86U86 1689 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 PREX1Q8TCU6 1659 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 BORCS7-ASMTA0A0B4J1R7 106 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 NDUFA3O95167 84 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 SIX6O95475 246 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 SFT2D2O95562 160 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 HSPE1P61604 102 aaKnown RBP-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 SPANXN1Q5VSR9 72 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 CROCCP2Q86T23 111 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 DNAJC15Q9Y5T4 150 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 EDC4Q6P2E9 1401 aaKnown RBP-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 PLXNC1O60486 1568 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 DIP2CQ9Y2E4 1556 aa-4.24□□□□□ -3.09
RNU6-542P-201ENST00000516405 A0A1B0GU69 56 aa-4.25□□□□□ -3.09
RNU6-542P-201ENST00000516405 A6NIN4 97 aa-4.25□□□□□ -3.09
RNU6-542P-201ENST00000516405 H7C1C5 153 aa-4.25□□□□□ -3.09
RNU6-542P-201ENST00000516405 LTC4SQ16873 150 aa-4.25□□□□□ -3.09
RNU6-542P-201ENST00000516405 C10orf128Q5T292 105 aa-4.25□□□□□ -3.09
RNU6-542P-201ENST00000516405 OR8I2Q8N0Y5 310 aa-4.25□□□□□ -3.09
RNU6-542P-201ENST00000516405 DEFB106AQ8N104 65 aa-4.25□□□□□ -3.09
RNU6-542P-201ENST00000516405 PRNDQ9UKY0 176 aa-4.25□□□□□ -3.09
RNU6-542P-201ENST00000516405 GUCA1BQ9UMX6 200 aa-4.25□□□□□ -3.09
RNU6-542P-201ENST00000516405 ERCC6Q03468 1493 aa-4.25□□□□□ -3.09
RNU6-542P-201ENST00000516405 CUL7Q14999 1698 aa-4.26□□□□□ -3.09
RNU6-542P-201ENST00000516405 TRPC5OSA6NMA1 111 aa-4.26□□□□□ -3.09
RNU6-542P-201ENST00000516405 RPS29P62273 56 aaKnown RBP-4.26□□□□□ -3.09
RNU6-542P-201ENST00000516405 TTC9CQ8N5M4 171 aa-4.26□□□□□ -3.09
RNU6-542P-201ENST00000516405 COPZ2Q9P299 210 aa-4.26□□□□□ -3.09
RNU6-542P-201ENST00000516405 KIF20BQ96Q89 1820 aa-4.26□□□□□ -3.09
RNU6-542P-201ENST00000516405 G3V2T6 193 aa-4.27□□□□□ -3.09
RNU6-542P-201ENST00000516405 PRO3102Q9H379 93 aa-4.27□□□□□ -3.09
RNU6-542P-201ENST00000516405 DAPK1P53355 1430 aa-4.28□□□□□ -3.09
RNU6-542P-201ENST00000516405 SPTY2D1-AS1A0A0U1RR47 76 aa-4.28□□□□□ -3.09
RNU6-542P-201ENST00000516405 IGLC1P0CG04 106 aa-4.28□□□□□ -3.09
RNU6-542P-201ENST00000516405 S100A11P31949 105 aa-4.28□□□□□ -3.09
RNU6-542P-201ENST00000516405 RPL22P35268 128 aaKnown RBP-4.28□□□□□ -3.09
RNU6-542P-201ENST00000516405 PPP1R2P41236 205 aa-4.28□□□□□ -3.09
RNU6-542P-201ENST00000516405 PARVGQ9HBI0 331 aa-4.28□□□□□ -3.09
RNU6-542P-201ENST00000516405 PRDM15P57071 1507 aaPredicted RBP-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 DEXIO95424 95 aa-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 RBP4P02753 201 aa-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 CCDC172P0C7W6 258 aa-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 SNCAP37840 140 aa-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 PRO1933Q9H354 126 aa-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 NCOR1P1Q9H4R4 102 aa-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 USE1Q9NZ43 259 aa-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 SSR3Q9UNL2 185 aa-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 FAM32AQ9Y421 112 aaKnown RBP-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 EIF3AQ14152 1382 aaKnown RBP-4.29□□□□□ -3.1
RNU6-542P-201ENST00000516405 A2MP01023 1474 aa-4.3□□□□□ -3.1
RNU6-542P-201ENST00000516405 PLB1Q6P1J6 1458 aa-4.3□□□□□ -3.1
RNU6-542P-201ENST00000516405 HMGN4O00479 90 aa-4.3□□□□□ -3.1
RNU6-542P-201ENST00000516405 CBLN1P23435 193 aa-4.3□□□□□ -3.1
RNU6-542P-201ENST00000516405 TMED4Q7Z7H5 227 aa-4.3□□□□□ -3.1
RNU6-542P-201ENST00000516405 CTNNBIP1Q9NSA3 81 aaPredicted RBP-4.3□□□□□ -3.1
RNU6-542P-201ENST00000516405 ARHGEF10O15013 1369 aa-4.3□□□□□ -3.1
RNU6-542P-201ENST00000516405 NMSQ5H8A3 153 aa-4.31□□□□□ -3.1
RNU6-542P-201ENST00000516405 S100A7L2Q5SY68 101 aa-4.31□□□□□ -3.1
RNU6-542P-201ENST00000516405 FAM223AQ8IWN6 122 aa-4.31□□□□□ -3.1
RNU6-542P-201ENST00000516405 LYRM2Q9NU23 88 aaPredicted RBP-4.31□□□□□ -3.1
RNU6-542P-201ENST00000516405 MAPKBP1O60336 1514 aa-4.31□□□□□ -3.1
RNU6-542P-201ENST00000516405 SHROOM2Q13796 1616 aa-4.32□□□□□ -3.1
RNU6-542P-201ENST00000516405 CLLU1Q5K131 121 aa-4.32□□□□□ -3.1
RNU6-542P-201ENST00000516405 CCDC122Q5T0U0 273 aa-4.32□□□□□ -3.1
RNU6-542P-201ENST00000516405 NMNAT1Q9HAN9 279 aaPredicted RBP-4.32□□□□□ -3.1
RNU6-542P-201ENST00000516405 LSM2Q9Y333 95 aaKnown RBP-4.32□□□□□ -3.1
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms