RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	TAL2	Q16559	108 aa		3.11	□□□□□ -1.91
ATP2C1-223	ENST00000515854	LINC00242	Q5T6M2	205 aa		3.11	□□□□□ -1.91
ATP2C1-223	ENST00000515854	AMMECR1L	Q6DCA0	310 aa		3.11	□□□□□ -1.91
ATP2C1-223	ENST00000515854	SH2D6	Q7Z4S9	175 aa		3.11	□□□□□ -1.91
ATP2C1-223	ENST00000515854	ORAOV1	Q8WV07	137 aa		3.11	□□□□□ -1.91
ATP2C1-223	ENST00000515854	PLEKHB2	Q96CS7	222 aa		3.11	□□□□□ -1.91
ATP2C1-223	ENST00000515854	FAM30A	Q9NZY2	134 aa		3.11	□□□□□ -1.91
ATP2C1-223	ENST00000515854	IGLV4-60	A0A075B6I1	120 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854		A0A096LPF7	62 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854		A0A1B0GUV1	79 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	C9orf118	A6NHY6	69 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	ZNF815P	A8K554	130 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854		H3BRM9	83 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	PLA2G1B	P04054	148 aa	Known RBP	3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	IGHV3-30-3	P0DP02	117 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	LGALS3	P17931	250 aa	Known RBP	3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	COX6A2	Q02221	97 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	LINC00469	Q8N7U9	141 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	SPATA25	Q9BR10	227 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	TM2D3	Q9BRN9	247 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	CHCHD5	Q9BSY4	110 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	TM2D2	Q9BX73	214 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	GEMIN7	Q9H840	131 aa	Known RBP	3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	CDKN2A-AS1	Q9UH64	79 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	ICOS	Q9Y6W8	199 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	TRRAP	Q9Y4A5	3859 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	CMYA5	Q8N3K9	4069 aa		3.1	□□□□□ -1.91
ATP2C1-223	ENST00000515854	DNAH3	Q8TD57	4116 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	NOTCH3	Q9UM47	2321 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	TRAV8-3	A0A0A6YYJ7	113 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	TRAV13-1	A0A0B4J241	112 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	IGLV5-39	A0A0G2JS06	123 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854		A0A0J9YWU9	116 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	TAX1BP3	O14907	124 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	PRB2	P02812	416 aa	Predicted RBP	3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	SPINK8	P0C7L1	97 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	HTN3	P15516	51 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	RBX1	P62877	108 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	LELP1	Q5T871	98 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854		Q6ZTC4	211 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	LURAP1L	Q8IV03	231 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	CEND1	Q8N111	149 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	SPANXB1	Q9NS25	103 aa	Predicted RBP	3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	MAST4	O15021	2626 aa		3.09	□□□□□ -1.91
ATP2C1-223	ENST00000515854	STAB1	Q9NY15	2570 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	IGHV3-64	A0A075B6Q5	118 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854		A0A0J9YXY3	114 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	LINC00959	A0A1B0GUT2	108 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854		A6NDN8	102 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	SMIM1	B2RUZ4	78 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	TMEM262	E9PQX1	116 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	CCL25	O15444	150 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	GCSH	P23434	173 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	FXYD2	P54710	66 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	DEFB121	Q5J5C9	76 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	ZFAND6	Q6FIF0	208 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	LYPD5	Q6UWN5	251 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	SCGB1D4	Q6XE38	83 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	C10orf126	Q8N4M7	172 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	C11orf45	Q8TAV5	145 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	HIST1H4G	Q99525	98 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	COX11	Q9Y6N1	276 aa		3.08	□□□□□ -1.92
ATP2C1-223	ENST00000515854	ANK2	Q01484	3957 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854		A0A087WZ39	114 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	DEFB131B	A0A096LNP1	70 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	IGHV3OR16-9	A0A0B4J2B5	98 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854		A0A1B0GWB2	263 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854		K7EP13	123 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	NDUFA1	O15239	70 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	IGHV3-30	P01768	117 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	SMIM13	P0DJ93	91 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	IGHV3-30-5	P0DP03	117 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	PTTG1IP	P53801	180 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	NANOS2	P60321	138 aa	Known RBP	3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	SS18	Q15532	418 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854		Q6ZVH6	145 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	LINC01561	Q8N1V8	128 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	LITAF	Q99732	161 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	NDUFA12	Q9UI09	145 aa		3.07	□□□□□ -1.92
ATP2C1-223	ENST00000515854	COL6A5	A8TX70	2615 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	TRAV10	A0A0B4J240	114 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	IGKV3OR2-268	A0A0C4DH90	116 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	TMEM238	C9JI98	176 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	TIMM17B	O60830	172 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	NBEAL2	Q6ZNJ1	2754 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	LINC00269	Q8N2A0	174 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	MRAP	Q8TCY5	172 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	ZNF625	Q96I27	306 aa	Predicted RBP	3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	SPANXD	Q9BXN6	97 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	PRR34	Q9NV39	138 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	NHP2	Q9NX24	153 aa	Known RBP	3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	SPANXC	Q9NY87	97 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	PKD1L1	Q8TDX9	2849 aa		3.06	□□□□□ -1.92
ATP2C1-223	ENST00000515854	HUWE1	Q7Z6Z7	4374 aa	Known RBP	3.05	□□□□□ -1.92
ATP2C1-223	ENST00000515854		K7ERJ3	54 aa		3.05	□□□□□ -1.92
ATP2C1-223	ENST00000515854	ANG	P03950	147 aa	Known RBP	3.05	□□□□□ -1.92
ATP2C1-223	ENST00000515854	HERV-K104	P63124	156 aa		3.05	□□□□□ -1.92
ATP2C1-223	ENST00000515854	REG3A	Q06141	175 aa		3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms