RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 MED13Q9UHV7 2174 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 IGKV2-28A0A075B6P5 120 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 IGHV6-1A0A0B4J1U7 121 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 IGHV3OR16-9A0A0B4J2B5 98 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 IGHV3-64DA0A0J9YX35 117 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 C19orf84I3L1E1 186 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 M0R2N4 97 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 IGKV2D-28P01615 120 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 IGHV3-9P01782 118 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 CRPP02741 224 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 ASB16-AS1Q495Z4 193 aa2.63□□□□□ -1.99
HMGCR-213ENST00000515776 PI4KAP42356 2102 aa2.62□□□□□ -1.99
HMGCR-213ENST00000515776 IGHV3-20A0A0C4DH32 117 aa2.62□□□□□ -1.99
HMGCR-213ENST00000515776 RPL27AP46776 148 aaKnown RBP2.62□□□□□ -1.99
HMGCR-213ENST00000515776 ADM2Q7Z4H4 148 aa2.62□□□□□ -1.99
HMGCR-213ENST00000515776 PATE1Q8WXA2 126 aa2.62□□□□□ -1.99
HMGCR-213ENST00000515776 ZFHX3Q15911 3703 aa2.62□□□□□ -1.99
HMGCR-213ENST00000515776 PCNX2A6NKB5 2137 aa2.62□□□□□ -1.99
HMGCR-213ENST00000515776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.61□□□□□ -1.99
HMGCR-213ENST00000515776 IGLV5-45A0A087WSX0 123 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 A0A087X002 238 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 CLPSL1A2RUU4 121 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 PLXNB1O43157 2135 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 IGLV1-51P01701 117 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 PRB1P04280 392 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 IGKV4-1P06312 121 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 ELOF1P60002 83 aaKnown RBP2.61□□□□□ -1.99
HMGCR-213ENST00000515776 RPS21P63220 83 aaKnown RBP2.61□□□□□ -1.99
HMGCR-213ENST00000515776 FBXL19-AS1Q494R0 122 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 PRR9Q5T870 116 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 SCXQ7RTU7 201 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 Q9BRP9 147 aa2.61□□□□□ -1.99
HMGCR-213ENST00000515776 K7EIM0 57 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 LY6G6DO95868 133 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 C9orf66Q5T8R8 295 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 Q8N814 137 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 PLAC8Q9NZF1 115 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 ZNRD1Q9P1U0 126 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 CELA1Q9UNI1 258 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 Q9Y3F1 56 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 S4R3C0 116 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 RP1P56715 2156 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 RTTNQ86VV8 2226 aa2.6□□□□□ -1.99
HMGCR-213ENST00000515776 IGLV4-60A0A075B6I1 120 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 M0QY20 66 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 APELAP0DMC3 54 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 IGHV4-31P0DP07 118 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 RNASE3P12724 160 aaKnown RBP2.59□□□□□ -1.99
HMGCR-213ENST00000515776 PDE6GP18545 87 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 LMO4P61968 165 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 PRB3Q04118 309 aaPredicted RBP2.59□□□□□ -1.99
HMGCR-213ENST00000515776 BSPH1Q075Z2 132 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 CASC2Q6XLA1 102 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 NTM-AS1Q6ZSK4 140 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 MAPK1IP1LQ8NDC0 245 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 PRSS33Q8NF86 280 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 B9D2Q9BPU9 175 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 RETNLBQ9BQ08 111 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 SND1-IT1Q9HBX3 110 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 CDKN2A-AS1Q9UH64 79 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 KLK9Q9UKQ9 250 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 LENEPQ9Y5L5 61 aa2.59□□□□□ -1.99
HMGCR-213ENST00000515776 COL27A1Q8IZC6 1860 aaPredicted RBP2.58□□□□□ -2
HMGCR-213ENST00000515776 IGHV3-49A0A0A0MS15 119 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 SRRM5B3KS81 715 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 K7EQD1 137 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 MRPL33O75394 65 aaKnown RBP2.58□□□□□ -2
HMGCR-213ENST00000515776 IGKV3-15P01624 115 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 REG3AQ06141 175 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 PRR4Q16378 134 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 ZFAND2AQ8N6M9 145 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 LINC00612Q8N6U2 182 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 Q8NAQ8 132 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 LINC01006Q8NI28 216 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 CHCHD10Q8WYQ3 142 aaPredicted RBP2.58□□□□□ -2
HMGCR-213ENST00000515776 LINC00208Q96KT6 92 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 LINC01558Q9Y6Z2 57 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 DOCK10Q96BY6 2186 aa2.58□□□□□ -2
HMGCR-213ENST00000515776 ZGRF1Q86YA3 2104 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 SDK2Q58EX2 2172 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 PRR14LQ5THK1 2151 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.57□□□□□ -2
HMGCR-213ENST00000515776 A0A096LNT2 108 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 IGHV3-73A0A0B4J1V6 119 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 IGHV1-3A0A0C4DH29 117 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 A0A1W2PNM2 257 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 SMIM1B2RUZ4 78 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 IGHV3-53P01767 116 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 PRB2P02812 416 aaPredicted RBP2.57□□□□□ -2
HMGCR-213ENST00000515776 IGHV1-8P0DP01 117 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 CCL18P55774 89 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 SPINK7P58062 85 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 COX6A2Q02221 97 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 HIGD2BQ4VC39 106 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 CXCL17Q6UXB2 119 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 ZNF702PQ9H963 129 aa2.57□□□□□ -2
HMGCR-213ENST00000515776 MALRD1Q5VYJ5 2156 aa2.56□□□□□ -2
HMGCR-213ENST00000515776 IGHV3-16A0A0C4DH30 117 aa2.56□□□□□ -2
HMGCR-213ENST00000515776 TRBV6-4A0A1B0GX49 114 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms