RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 ESRGQ1W209 222 aa6.51□□□□□ -1.37
TPM3-222ENST00000515609 CD164L2Q6UWJ8 174 aa6.51□□□□□ -1.37
TPM3-222ENST00000515609 RMI2Q96E14 147 aa6.51□□□□□ -1.37
TPM3-222ENST00000515609 PRR34Q9NV39 138 aa6.51□□□□□ -1.37
TPM3-222ENST00000515609 CDKN2A-AS1Q9UH64 79 aa6.51□□□□□ -1.37
TPM3-222ENST00000515609 A0A087WZ39 114 aa6.5□□□□□ -1.37
TPM3-222ENST00000515609 IGKV3OR2-268A0A0C4DH90 116 aa6.5□□□□□ -1.37
TPM3-222ENST00000515609 COX7A2LO14548 114 aa6.5□□□□□ -1.37
TPM3-222ENST00000515609 DNAH10OSP0CZ25 163 aa6.5□□□□□ -1.37
TPM3-222ENST00000515609 IGHV3-30-3P0DP02 117 aa6.5□□□□□ -1.37
TPM3-222ENST00000515609 MALP21145 153 aa6.5□□□□□ -1.37
TPM3-222ENST00000515609 HSD52Q0P140 79 aa6.5□□□□□ -1.37
TPM3-222ENST00000515609 UPK3BQ9BT76 320 aa6.5□□□□□ -1.37
TPM3-222ENST00000515609 IGKV2D-26A0A0A0MRZ7 120 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 TRAV8-3A0A0A6YYJ7 113 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 IGHV3OR16-9A0A0B4J2B5 98 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 IGLV5-39A0A0G2JS06 123 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 TMEM238C9JI98 176 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 PRSS2P07478 247 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 CTAG1AP78358 180 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 Q6ZVH6 145 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 PCP2Q8IVA1 136 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 KLK12Q9UKR0 248 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 COX11Q9Y6N1 276 aa6.49□□□□□ -1.37
TPM3-222ENST00000515609 TMEM238LA0A1B0GVL6 79 aa6.48□□□□□ -1.37
TPM3-222ENST00000515609 A6NJY4 79 aa6.48□□□□□ -1.37
TPM3-222ENST00000515609 SPINK8P0C7L1 97 aa6.48□□□□□ -1.37
TPM3-222ENST00000515609 CXCL5P42830 114 aa6.48□□□□□ -1.37
TPM3-222ENST00000515609 XCL1P47992 114 aa6.48□□□□□ -1.37
TPM3-222ENST00000515609 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
TPM3-222ENST00000515609 ZFAND6Q6FIF0 208 aa6.48□□□□□ -1.37
TPM3-222ENST00000515609 UBE2DNLQ8IWF7 75 aa6.48□□□□□ -1.37
TPM3-222ENST00000515609 CHCHD10Q8WYQ3 142 aaPredicted RBP6.48□□□□□ -1.37
TPM3-222ENST00000515609 NDUFA12Q9UI09 145 aa6.48□□□□□ -1.37
TPM3-222ENST00000515609 ANK2Q01484 3957 aa6.48□□□□□ -1.37
TPM3-222ENST00000515609 A6NDN8 102 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 SMIM1B2RUZ4 78 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 NDUFA1O15239 70 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 TIMM17BO60830 172 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 IGHV3-30P01768 117 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 IGHV3-33P01772 117 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 IGHV3-30-5P0DP03 117 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 COX6A2Q02221 97 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 WFDC10BQ8IUB3 73 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 UBE2WQ96B02 151 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 C1orf43Q9BWL3 253 aa6.47□□□□□ -1.37
TPM3-222ENST00000515609 IGHV3-64A0A075B6Q5 118 aa6.46□□□□□ -1.38
TPM3-222ENST00000515609 C6orf226Q5I0X4 101 aa6.46□□□□□ -1.38
TPM3-222ENST00000515609 CFAP161Q6P656 301 aa6.46□□□□□ -1.38
TPM3-222ENST00000515609 COX7B2Q8TF08 81 aa6.46□□□□□ -1.38
TPM3-222ENST00000515609 SPANXB1Q9NS25 103 aaPredicted RBP6.46□□□□□ -1.38
TPM3-222ENST00000515609 A0A0J9YXY3 114 aa6.45□□□□□ -1.38
TPM3-222ENST00000515609 F8WDY8 70 aa6.45□□□□□ -1.38
TPM3-222ENST00000515609 CKS1BP61024 79 aa6.45□□□□□ -1.38
TPM3-222ENST00000515609 TTC32Q5I0X7 151 aa6.45□□□□□ -1.38
TPM3-222ENST00000515609 COL5A1-AS1Q5SY13 56 aa6.45□□□□□ -1.38
TPM3-222ENST00000515609 CLPSL2Q6UWE3 100 aa6.45□□□□□ -1.38
TPM3-222ENST00000515609 C2orf91Q6ZV80 131 aa6.45□□□□□ -1.38
TPM3-222ENST00000515609 Q8IZM0 81 aa6.45□□□□□ -1.38
TPM3-222ENST00000515609 LINC00588Q9Y4M8 146 aa6.45□□□□□ -1.38
TPM3-222ENST00000515609 IBA57-AS1B1ANH7 110 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 PTTG1IPP53801 180 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 ENHOQ6UWT2 76 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 C5orf38Q86SI9 138 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 MAPKAPK5-AS1Q8N8E1 139 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 MUC7Q8TAX7 377 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 ORAOV1Q8WV07 137 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 TM2D2Q9BX73 214 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 Q9H8V8 135 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 TOMM7Q9P0U1 55 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 APLNQ9ULZ1 77 aa6.44□□□□□ -1.38
TPM3-222ENST00000515609 GAGE12HA6NDE8 117 aa6.43□□□□□ -1.38
TPM3-222ENST00000515609 IFITM1P13164 125 aa6.43□□□□□ -1.38
TPM3-222ENST00000515609 HINT1P49773 126 aaPredicted RBP6.43□□□□□ -1.38
TPM3-222ENST00000515609 RPL24P83731 157 aaKnown RBP6.43□□□□□ -1.38
TPM3-222ENST00000515609 TP73-AS1Q9UF72 201 aa6.43□□□□□ -1.38
TPM3-222ENST00000515609 IGLV10-54A0A075B6I4 117 aa6.42□□□□□ -1.38
TPM3-222ENST00000515609 TSPEAR-AS2P59090 65 aa6.42□□□□□ -1.38
TPM3-222ENST00000515609 FOXI1Q12951 378 aa6.42□□□□□ -1.38
TPM3-222ENST00000515609 COX17Q14061 63 aa6.42□□□□□ -1.38
TPM3-222ENST00000515609 BATFQ16520 125 aa6.42□□□□□ -1.38
TPM3-222ENST00000515609 MEIG1Q5JSS6 88 aa6.42□□□□□ -1.38
TPM3-222ENST00000515609 BVES-AS1Q5T3Y7 98 aa6.42□□□□□ -1.38
TPM3-222ENST00000515609 CEND1Q8N111 149 aa6.42□□□□□ -1.38
TPM3-222ENST00000515609 TTTY13Q9BZ97 58 aa6.42□□□□□ -1.38
TPM3-222ENST00000515609 PPDPFQ9H3Y8 114 aa6.42□□□□□ -1.38
TPM3-222ENST00000515609 IGKV2D-24A0A075B6R9 120 aa6.41□□□□□ -1.38
TPM3-222ENST00000515609 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.41□□□□□ -1.38
TPM3-222ENST00000515609 ZNF561-AS1K7EIQ3 104 aa6.41□□□□□ -1.38
TPM3-222ENST00000515609 ZNF625Q96I27 306 aaPredicted RBP6.41□□□□□ -1.38
TPM3-222ENST00000515609 WWC2-AS2Q96NR7 200 aa6.41□□□□□ -1.38
TPM3-222ENST00000515609 SPANXDQ9BXN6 97 aa6.41□□□□□ -1.38
TPM3-222ENST00000515609 SNHG12Q9BXW3 62 aa6.41□□□□□ -1.38
TPM3-222ENST00000515609 SPANXCQ9NY87 97 aa6.41□□□□□ -1.38
TPM3-222ENST00000515609 TENM3Q9P273 2699 aa6.4□□□□□ -1.39
TPM3-222ENST00000515609 SMIM13P0DJ93 91 aa6.39□□□□□ -1.39
TPM3-222ENST00000515609 SPAG11BQ08648 103 aa6.39□□□□□ -1.39
TPM3-222ENST00000515609 Q8N3U1 123 aa6.39□□□□□ -1.39
TPM3-222ENST00000515609 C2orf48Q96LS8 159 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms