RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 PMAIP1Q13794 54 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 C20orf203Q8NBC4 194 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 CXCL5P42830 114 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 PSMB2P49721 201 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 SYNJ2BPP57105 145 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 SS18Q15532 418 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 LINC00167Q96N53 147 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 JPT2Q9H910 190 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 MTORP42345 2549 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 H3BVH4 76 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 GAGE2BQ13066 116 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 MIAQ16674 131 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 DEFB114Q30KQ6 69 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 GAGE2EQ4V326 116 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 FAM222AQ5U5X8 452 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 MUSTN1Q8IVN3 82 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 GAGE2DQ9UEU5 116 aa5.29□□□□□ -1.56
CLIP1-205ENST00000514271 TTC32Q5I0X7 151 aa5.28□□□□□ -1.56
CLIP1-205ENST00000514271 UNQ9165/PRO28630Q6UXU0 137 aa5.28□□□□□ -1.56
CLIP1-205ENST00000514271 CYSTM1Q9H1C7 97 aa5.28□□□□□ -1.56
CLIP1-205ENST00000514271 S4R3C0 116 aa5.28□□□□□ -1.56
CLIP1-205ENST00000514271 C18orf65Q6ZTR6 163 aa5.28□□□□□ -1.56
CLIP1-205ENST00000514271 TRAV21A0A0B4J279 112 aa5.28□□□□□ -1.56
CLIP1-205ENST00000514271 CRYGAP11844 174 aa5.28□□□□□ -1.56
CLIP1-205ENST00000514271 LYRM7Q5U5X0 104 aa5.28□□□□□ -1.56
CLIP1-205ENST00000514271 OR10J6PQ8NGY7 276 aa5.28□□□□□ -1.56
CLIP1-205ENST00000514271 LOC107984156A0A0G2JMH3 177 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 RBMY1A1P0DJD3 496 aaKnown RBP5.27□□□□□ -1.57
CLIP1-205ENST00000514271 RBMY1CP0DJD4 496 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 RBMY1FQ15415 496 aaKnown RBP5.27□□□□□ -1.57
CLIP1-205ENST00000514271 DEFB136Q30KP8 78 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 ARL17AQ8IVW1 177 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 VSIG2Q96IQ7 327 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 MXRA5Q9NR99 2828 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 TMEM170BQ5T4T1 132 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 C15orf53Q8NAA6 179 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 ZNF625Q96I27 306 aaPredicted RBP5.27□□□□□ -1.57
CLIP1-205ENST00000514271 GNRH2O43555 120 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 TRBV12-3P01733 135 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 HERVK_113P63121 156 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 ICOSQ9Y6W8 199 aa5.27□□□□□ -1.57
CLIP1-205ENST00000514271 IGHV3-30-3P0DP02 117 aa5.26□□□□□ -1.57
CLIP1-205ENST00000514271 ATXN8Q156A1 80 aa5.26□□□□□ -1.57
CLIP1-205ENST00000514271 LINC00526Q96FQ7 95 aa5.26□□□□□ -1.57
CLIP1-205ENST00000514271 RHPN1-AS1Q9BWJ2 59 aa5.26□□□□□ -1.57
CLIP1-205ENST00000514271 UBE2D4Q9Y2X8 147 aa5.26□□□□□ -1.57
CLIP1-205ENST00000514271 IGHV1-58A0A0C4DH39 117 aa5.26□□□□□ -1.57
CLIP1-205ENST00000514271 APOC4P55056 127 aa5.26□□□□□ -1.57
CLIP1-205ENST00000514271 SOSTDC1Q6X4U4 206 aa5.26□□□□□ -1.57
CLIP1-205ENST00000514271 NF1P21359 2839 aa5.25□□□□□ -1.57
CLIP1-205ENST00000514271 NDUFA1O15239 70 aa5.25□□□□□ -1.57
CLIP1-205ENST00000514271 IGHV3-23P01764 117 aa5.25□□□□□ -1.57
CLIP1-205ENST00000514271 MRPL55Q7Z7F7 128 aaKnown RBP5.25□□□□□ -1.57
CLIP1-205ENST00000514271 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.25□□□□□ -1.57
CLIP1-205ENST00000514271 ATP5G1P05496 136 aa5.25□□□□□ -1.57
CLIP1-205ENST00000514271 TIMM21Q9BVV7 248 aa5.25□□□□□ -1.57
CLIP1-205ENST00000514271 I3L3M4 83 aa5.25□□□□□ -1.57
CLIP1-205ENST00000514271 SNRPD3P62318 126 aaKnown RBP5.25□□□□□ -1.57
CLIP1-205ENST00000514271 CEMP1Q6PRD7 247 aaPredicted RBP5.25□□□□□ -1.57
CLIP1-205ENST00000514271 NTN5Q8WTR8 489 aaPredicted RBP5.25□□□□□ -1.57
CLIP1-205ENST00000514271 LYSTQ99698 3801 aa5.24□□□□□ -1.57
CLIP1-205ENST00000514271 KLK5Q9Y337 293 aaPredicted RBP5.24□□□□□ -1.57
CLIP1-205ENST00000514271 TEP1Q99973 2627 aaKnown RBP5.24□□□□□ -1.57
CLIP1-205ENST00000514271 ACYP1P07311 99 aa5.24□□□□□ -1.57
CLIP1-205ENST00000514271 DAND5Q8N907 189 aa5.24□□□□□ -1.57
CLIP1-205ENST00000514271 C11orf72Q8NBR9 251 aa5.24□□□□□ -1.57
CLIP1-205ENST00000514271 A0A0U1RQV1 116 aa5.23□□□□□ -1.57
CLIP1-205ENST00000514271 K7EQG2 157 aa5.23□□□□□ -1.57
CLIP1-205ENST00000514271 PRYO14603 147 aa5.23□□□□□ -1.57
CLIP1-205ENST00000514271 SCGB1C2P0DMR2 95 aa5.23□□□□□ -1.57
CLIP1-205ENST00000514271 TNP2Q05952 138 aa5.23□□□□□ -1.57
CLIP1-205ENST00000514271 OPRPNQ99935 248 aaPredicted RBP5.23□□□□□ -1.57
CLIP1-205ENST00000514271 TRRAPQ9Y4A5 3859 aa5.23□□□□□ -1.57
CLIP1-205ENST00000514271 B9D2Q9BPU9 175 aa5.23□□□□□ -1.57
CLIP1-205ENST00000514271 C19orf73Q9NVV2 129 aa5.23□□□□□ -1.57
CLIP1-205ENST00000514271 FAM236AA0A1B0GUQ0 79 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 FAM236BA0A1B0GV22 79 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 H3BMM0 161 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 C1orf158Q8N1D5 194 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 C3orf22Q8N5N4 141 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 UBE2WQ96B02 151 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 DPH3Q96FX2 82 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 FAM218AQ96MZ4 157 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 UQCRQO14949 82 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 TRACP01848 142 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 GYPEP15421 78 aa5.22□□□□□ -1.57
CLIP1-205ENST00000514271 TIMM8BQ9Y5J9 83 aaPredicted RBP5.22□□□□□ -1.57
CLIP1-205ENST00000514271 DEFB1P60022 68 aa5.21□□□□□ -1.57
CLIP1-205ENST00000514271 SPANXN1Q5VSR9 72 aa5.21□□□□□ -1.57
CLIP1-205ENST00000514271 Q6ZSN1 163 aa5.21□□□□□ -1.58
CLIP1-205ENST00000514271 SNCGO76070 127 aa5.21□□□□□ -1.58
CLIP1-205ENST00000514271 C9orf129Q5T035 196 aaKnown RBP5.21□□□□□ -1.58
CLIP1-205ENST00000514271 IGKV2-28A0A075B6P5 120 aa5.2□□□□□ -1.58
CLIP1-205ENST00000514271 COX7A2LO14548 114 aa5.2□□□□□ -1.58
CLIP1-205ENST00000514271 IGKV2D-28P01615 120 aa5.2□□□□□ -1.58
CLIP1-205ENST00000514271 KRTAP10-11P60412 298 aa5.2□□□□□ -1.58
CLIP1-205ENST00000514271 A0A0J9YXV3 536 aa5.2□□□□□ -1.58
CLIP1-205ENST00000514271 HERVK_113P61574 105 aa5.2□□□□□ -1.58
CLIP1-205ENST00000514271 MAP6D1Q9H9H5 199 aa5.2□□□□□ -1.58
CLIP1-205ENST00000514271 MAP1AP78559 2803 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms