RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 B9D2Q9BPU9 175 aa8.79□□□□□ -1
PVT1-203ENST00000513868 H3BRM9 83 aa8.78□□□□□ -1
PVT1-203ENST00000513868 DNHD1Q96M86 4753 aa8.78□□□□□ -1
PVT1-203ENST00000513868 TRAV10A0A0B4J240 114 aa8.78□□□□□ -1
PVT1-203ENST00000513868 IGHV3OR16-9A0A0B4J2B5 98 aa8.78□□□□□ -1
PVT1-203ENST00000513868 SMIM1B2RUZ4 78 aa8.78□□□□□ -1
PVT1-203ENST00000513868 ESRGQ1W209 222 aa8.77□□□□□ -1.01
PVT1-203ENST00000513868 COL5A1-AS1Q5SY13 56 aa8.77□□□□□ -1.01
PVT1-203ENST00000513868 LINC00269Q8N2A0 174 aa8.77□□□□□ -1.01
PVT1-203ENST00000513868 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
PVT1-203ENST00000513868 CLPSL2Q6UWE3 100 aa8.76□□□□□ -1.01
PVT1-203ENST00000513868 C10orf126Q8N4M7 172 aa8.76□□□□□ -1.01
PVT1-203ENST00000513868 ORAOV1Q8WV07 137 aa8.76□□□□□ -1.01
PVT1-203ENST00000513868 MEGF8Q7Z7M0 2845 aa8.76□□□□□ -1.01
PVT1-203ENST00000513868 A0A1B0GV90 55 aa8.75□□□□□ -1.01
PVT1-203ENST00000513868 TAL2Q16559 108 aa8.75□□□□□ -1.01
PVT1-203ENST00000513868 ZFAND6Q6FIF0 208 aa8.75□□□□□ -1.01
PVT1-203ENST00000513868 SCGB1D4Q6XE38 83 aa8.75□□□□□ -1.01
PVT1-203ENST00000513868 TM2D2Q9BX73 214 aa8.75□□□□□ -1.01
PVT1-203ENST00000513868 ANGP03950 147 aaKnown RBP8.75□□□□□ -1.01
PVT1-203ENST00000513868 WFDC10BQ8IUB3 73 aa8.75□□□□□ -1.01
PVT1-203ENST00000513868 CEND1Q8N111 149 aa8.75□□□□□ -1.01
PVT1-203ENST00000513868 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
PVT1-203ENST00000513868 A0A087WZ39 114 aa8.74□□□□□ -1.01
PVT1-203ENST00000513868 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
PVT1-203ENST00000513868 K7EP13 123 aa8.74□□□□□ -1.01
PVT1-203ENST00000513868 CCL25O15444 150 aa8.74□□□□□ -1.01
PVT1-203ENST00000513868 FXYD2P54710 66 aa8.74□□□□□ -1.01
PVT1-203ENST00000513868 REG3AQ06141 175 aa8.74□□□□□ -1.01
PVT1-203ENST00000513868 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
PVT1-203ENST00000513868 GCSHP23434 173 aa8.73□□□□□ -1.01
PVT1-203ENST00000513868 SS18Q15532 418 aa8.73□□□□□ -1.01
PVT1-203ENST00000513868 HIST1H4GQ99525 98 aa8.73□□□□□ -1.01
PVT1-203ENST00000513868 SPANXB1Q9NS25 103 aaPredicted RBP8.73□□□□□ -1.01
PVT1-203ENST00000513868 PRR34Q9NV39 138 aa8.73□□□□□ -1.01
PVT1-203ENST00000513868 XCL1P47992 114 aa8.72□□□□□ -1.01
PVT1-203ENST00000513868 LITAFQ99732 161 aa8.72□□□□□ -1.01
PVT1-203ENST00000513868 NDUFA1O15239 70 aa8.72□□□□□ -1.01
PVT1-203ENST00000513868 C5orf38Q86SI9 138 aa8.72□□□□□ -1.01
PVT1-203ENST00000513868 C15orf53Q8NAA6 179 aa8.72□□□□□ -1.01
PVT1-203ENST00000513868 KLK12Q9UKR0 248 aa8.72□□□□□ -1.01
PVT1-203ENST00000513868 IGHV3-30P01768 117 aa8.71□□□□□ -1.02
PVT1-203ENST00000513868 IGHV3-33P01772 117 aa8.71□□□□□ -1.02
PVT1-203ENST00000513868 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.02
PVT1-203ENST00000513868 ENHOQ6UWT2 76 aa8.71□□□□□ -1.02
PVT1-203ENST00000513868 Q6ZVH6 145 aa8.71□□□□□ -1.02
PVT1-203ENST00000513868 TAX1BP3O14907 124 aa8.7□□□□□ -1.02
PVT1-203ENST00000513868 CHCHD10Q8WYQ3 142 aaPredicted RBP8.7□□□□□ -1.02
PVT1-203ENST00000513868 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
PVT1-203ENST00000513868 IGLV10-54A0A075B6I4 117 aa8.69□□□□□ -1.02
PVT1-203ENST00000513868 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.021e-7■□□□□ 9.5
PVT1-203ENST00000513868 CD164L2Q6UWJ8 174 aa8.69□□□□□ -1.02
PVT1-203ENST00000513868 Q9H8V8 135 aa8.69□□□□□ -1.02
PVT1-203ENST00000513868 A6NDN8 102 aa8.69□□□□□ -1.02
PVT1-203ENST00000513868 NHLRC4P0CG21 123 aaPredicted RBP8.69□□□□□ -1.02
PVT1-203ENST00000513868 ADAMTSL4-AS1Q5T5F5 129 aa8.69□□□□□ -1.02
PVT1-203ENST00000513868 LINC01561Q8N1V8 128 aa8.69□□□□□ -1.02
PVT1-203ENST00000513868 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
PVT1-203ENST00000513868 DYNC2H1Q8NCM8 4307 aaKnown RBP8.68□□□□□ -1.02
PVT1-203ENST00000513868 IGLL5B9A064 214 aa8.68□□□□□ -1.02
PVT1-203ENST00000513868 FOXI1Q12951 378 aa8.68□□□□□ -1.02
PVT1-203ENST00000513868 TMEM238C9JI98 176 aa8.67□□□□□ -1.02
PVT1-203ENST00000513868 PTTG1IPP53801 180 aa8.67□□□□□ -1.02
PVT1-203ENST00000513868 LINC01556Q5JQF7 62 aa8.67□□□□□ -1.02
PVT1-203ENST00000513868 LINC00588Q9Y4M8 146 aa8.67□□□□□ -1.02
PVT1-203ENST00000513868 CSMD3Q7Z407 3707 aa8.67□□□□□ -1.02
PVT1-203ENST00000513868 TIMM17BO60830 172 aa8.66□□□□□ -1.02
PVT1-203ENST00000513868 NHP2Q9NX24 153 aaKnown RBP8.66□□□□□ -1.02
PVT1-203ENST00000513868 COX11Q9Y6N1 276 aa8.66□□□□□ -1.02
PVT1-203ENST00000513868 A0A1B0GWB2 263 aa8.65□□□□□ -1.02
PVT1-203ENST00000513868 K7ERJ3 54 aa8.65□□□□□ -1.02
PVT1-203ENST00000513868 COX7A2LO14548 114 aa8.65□□□□□ -1.02
PVT1-203ENST00000513868 DNAH10OSP0CZ25 163 aa8.65□□□□□ -1.02
PVT1-203ENST00000513868 SPANXDQ9BXN6 97 aa8.65□□□□□ -1.02
PVT1-203ENST00000513868 SPANXCQ9NY87 97 aa8.65□□□□□ -1.02
PVT1-203ENST00000513868 TOMM7Q9P0U1 55 aa8.65□□□□□ -1.02
PVT1-203ENST00000513868 KRTAP26-1Q6PEX3 210 aa8.65□□□□□ -1.03
PVT1-203ENST00000513868 MUSTN1Q8IVN3 82 aa8.65□□□□□ -1.03
PVT1-203ENST00000513868 UBE2WQ96B02 151 aa8.65□□□□□ -1.03
PVT1-203ENST00000513868 TRAV8-4A0A0B4J246 113 aa8.64□□□□□ -1.03
PVT1-203ENST00000513868 GAGE12HA6NDE8 117 aa8.64□□□□□ -1.03
PVT1-203ENST00000513868 SMIM13P0DJ93 91 aa8.64□□□□□ -1.03
PVT1-203ENST00000513868 HERV-K104P63124 156 aa8.64□□□□□ -1.03
PVT1-203ENST00000513868 KIAA0087Q14695 138 aa8.64□□□□□ -1.03
PVT1-203ENST00000513868 CRPP02741 224 aa8.63□□□□□ -1.03
PVT1-203ENST00000513868 MIAQ16674 131 aa8.63□□□□□ -1.03
PVT1-203ENST00000513868 Q8IZM0 81 aa8.63□□□□□ -1.03
PVT1-203ENST00000513868 RAB37Q96AX2 223 aa8.63□□□□□ -1.03
PVT1-203ENST00000513868 TENM2Q9NT68 2774 aa8.63□□□□□ -1.03
PVT1-203ENST00000513868 EIF4EBP3O60516 100 aaPredicted RBP8.62□□□□□ -1.03
PVT1-203ENST00000513868 CCL18P55774 89 aa8.62□□□□□ -1.03
PVT1-203ENST00000513868 DNAH7Q8WXX0 4024 aa8.62□□□□□ -1.03
PVT1-203ENST00000513868 C9orf118A6NHY6 69 aa8.62□□□□□ -1.03
PVT1-203ENST00000513868 DAND5Q8N907 189 aa8.62□□□□□ -1.03
PVT1-203ENST00000513868 UPK3BQ9BT76 320 aa8.62□□□□□ -1.03
PVT1-203ENST00000513868 APLNQ9ULZ1 77 aa8.62□□□□□ -1.03
PVT1-203ENST00000513868 TMEM238LA0A1B0GVL6 79 aa8.61□□□□□ -1.03
PVT1-203ENST00000513868 A4D1N5 150 aa8.61□□□□□ -1.03
PVT1-203ENST00000513868 A6NJY4 79 aa8.61□□□□□ -1.03
PVT1-203ENST00000513868 PRSS2P07478 247 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms