RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 FAM24AA6NFZ4 105 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 CHKB-CPT1BH3BT56 60 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 SNAPC5O75971 98 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 MGPP08493 103 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 GNG4P50150 75 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 WHAMMP3Q1A5X7 153 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 TMEM263Q8WUH6 116 aaKnown RBP-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 FAM167A-AS1Q96KT0 104 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 DPH3P1Q9H4G8 78 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 NXT2Q9NPJ8 142 aaKnown RBP-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 CDC42SE2Q9NRR3 84 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 UQCR10Q9UDW1 63 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 LPAP08519 4548 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 CNOT1A5YKK6 2376 aaKnown RBP-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 PPRC1Q5VV67 1664 aaKnown RBP-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 RAPGEF6Q8TEU7 1601 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 MYOM2P54296 1465 aa-0.1□□□□□ -2.42
TRAPPC11-210ENST00000513600 PCLOQ9Y6V0 5065 aa-0.1□□□□□ -2.42
TRAPPC11-210ENST00000513600 SRRM2Q9UQ35 2752 aaKnown RBP-0.1□□□□□ -2.42
TRAPPC11-210ENST00000513600 BSNQ9UPA5 3926 aa-0.1□□□□□ -2.43
TRAPPC11-210ENST00000513600 MYOM1P52179 1685 aa-0.1□□□□□ -2.43
TRAPPC11-210ENST00000513600 CORTO00230 105 aa-0.1□□□□□ -2.43
TRAPPC11-210ENST00000513600 SPRR4Q96PI1 79 aa-0.1□□□□□ -2.43
TRAPPC11-210ENST00000513600 C2orf88Q9BSF0 95 aa-0.1□□□□□ -2.43
TRAPPC11-210ENST00000513600 FAIMQ9NVQ4 179 aa-0.1□□□□□ -2.43
TRAPPC11-210ENST00000513600 SHROOM2Q13796 1616 aa-0.1□□□□□ -2.43
TRAPPC11-210ENST00000513600 ROBO1Q9Y6N7 1651 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 NSD3Q9BZ95 1437 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 STAB2Q8WWQ8 2551 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 SETD2Q9BYW2 2564 aaPredicted RBP-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 NBEAL1Q6ZS30 2694 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 PAPPAQ13219 1627 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 F6UZH7 168 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 IGLC1P0CG04 106 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 COX6B1P14854 86 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 SPRR2DP22532 72 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 GNG11P61952 73 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 PPP3R1P63098 170 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 DEFB123Q8N688 67 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 TMEM203Q969S6 136 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 TNXBP22105 4242 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 USP9YO00507 2555 aaPredicted RBP-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 FAT2Q9NYQ8 4349 aa-0.11□□□□□ -2.43
TRAPPC11-210ENST00000513600 SCAPERQ9BY12 1400 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 HMGXB3Q12766 1538 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 KMT2CQ8NEZ4 4911 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 HSPG2P98160 4391 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 FXYD6-FXYD2A0A087WZ82 144 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 H3BQ15 152 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 COX6CP09669 75 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 UBE2D3P61077 147 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 UBE2D2P62837 147 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 MRPS10P82664 201 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 FAM223AQ8IWN6 122 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 SVBPQ8N300 66 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 ARL2-SNX15V9GYD0 113 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 MUC2Q02817 5179 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 FLNBO75369 2602 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 CUL7Q14999 1698 aa-0.12□□□□□ -2.43
TRAPPC11-210ENST00000513600 ALMS1Q8TCU4 4167 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 MAPKBP1O60336 1514 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 ZFHX3Q15911 3703 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 EIF4G3O43432 1585 aaKnown RBP-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 ARHGEF5Q12774 1597 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 POLA1P09884 1462 aaPredicted RBP-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 WDR7Q9Y4E6 1490 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 NAP1L6A6NFF2 107 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 PRM1P04553 51 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 SPRR1BP22528 89 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 Q0VG73 95 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 C10orf113Q5VZT2 155 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 MANBALQ9NQG1 85 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 PRO1854Q9UHT4 67 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 GNG8Q9UK08 70 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 HECTD1Q9ULT8 2610 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 BTAF1O14981 1849 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 EHBP1L1Q8N3D4 1523 aa-0.13□□□□□ -2.43
TRAPPC11-210ENST00000513600 CREBBPQ92793 2442 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 HERC2O95714 4834 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 GAPVD1Q14C86 1478 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 MAGI1Q96QZ7 1491 aaPredicted RBP-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 NIPBLQ6KC79 2804 aaeCLIP-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 TRBV7-4A0A0J9YYF1 115 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 LINC00587B1AMM8 73 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 TRAPPC2P0DI81 140 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 TRAPPC2BP0DI82 140 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 S100A1P23297 94 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 UBA52P62987 128 aaKnown RBP-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 PRO1933Q9H354 126 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 RYR3Q15413 4870 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 TULP4Q9NRJ4 1543 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 ARHGEF12Q9NZN5 1544 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 EPG5Q9HCE0 2579 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 COL6A3P12111 3177 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 TET3O43151 1660 aa-0.14□□□□□ -2.43
TRAPPC11-210ENST00000513600 DIP2CQ9Y2E4 1556 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 PZPP20742 1482 aa-0.15□□□□□ -2.43
TRAPPC11-210ENST00000513600 MRC2Q9UBG0 1479 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms