RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 E9PLD3 99 aa5.6□□□□□ -1.51
HTT-209ENST00000512068 UBE2D1P51668 147 aa5.6□□□□□ -1.51
HTT-209ENST00000512068 KRTAP10-2P60368 255 aa5.6□□□□□ -1.51
HTT-209ENST00000512068 SS18Q15532 418 aa5.6□□□□□ -1.51
HTT-209ENST00000512068 PLEKHB2Q96CS7 222 aa5.6□□□□□ -1.51
HTT-209ENST00000512068 MGAM2Q2M2H8 2515 aa5.6□□□□□ -1.51
HTT-209ENST00000512068 CMYA5Q8N3K9 4069 aa5.59□□□□□ -1.51
HTT-209ENST00000512068 A0A1B0GUV1 79 aa5.59□□□□□ -1.51
HTT-209ENST00000512068 LINC00587B1AMM8 73 aa5.59□□□□□ -1.51
HTT-209ENST00000512068 ANGP03950 147 aaKnown RBP5.59□□□□□ -1.51
HTT-209ENST00000512068 ZNF22P17026 224 aaPredicted RBP5.59□□□□□ -1.51
HTT-209ENST00000512068 TIRAPP58753 221 aa5.59□□□□□ -1.51
HTT-209ENST00000512068 RBX1P62877 108 aa5.59□□□□□ -1.51
HTT-209ENST00000512068 PKD1L1Q8TDX9 2849 aa5.59□□□□□ -1.51
HTT-209ENST00000512068 TMEM223A0PJW6 202 aa5.58□□□□□ -1.52
HTT-209ENST00000512068 ZNF815PA8K554 130 aa5.58□□□□□ -1.52
HTT-209ENST00000512068 LEPROTO15243 131 aa5.58□□□□□ -1.52
HTT-209ENST00000512068 DLEU1O43261 78 aa5.58□□□□□ -1.52
HTT-209ENST00000512068 CRPP02741 224 aa5.58□□□□□ -1.52
HTT-209ENST00000512068 MPV17L2Q567V2 206 aa5.58□□□□□ -1.52
HTT-209ENST00000512068 LYPD5Q6UWN5 251 aa5.58□□□□□ -1.52
HTT-209ENST00000512068 SCGB1D4Q6XE38 83 aa5.58□□□□□ -1.52
HTT-209ENST00000512068 BOD1L2Q8IYS8 172 aa5.58□□□□□ -1.52
HTT-209ENST00000512068 IGLV4-60A0A075B6I1 120 aa5.57□□□□□ -1.52
HTT-209ENST00000512068 IGHV3-64A0A075B6Q5 118 aa5.57□□□□□ -1.52
HTT-209ENST00000512068 MYMXA0A1B0GTQ4 84 aa5.57□□□□□ -1.52
HTT-209ENST00000512068 J3QQQ9 107 aa5.57□□□□□ -1.52
HTT-209ENST00000512068 M0R143 59 aa5.57□□□□□ -1.52
HTT-209ENST00000512068 SIVA1O15304 175 aa5.57□□□□□ -1.52
HTT-209ENST00000512068 CCL25O15444 150 aa5.57□□□□□ -1.52
HTT-209ENST00000512068 CTAG1AP78358 180 aa5.57□□□□□ -1.52
HTT-209ENST00000512068 BATFQ16520 125 aa5.57□□□□□ -1.52
HTT-209ENST00000512068 PCP2Q8IVA1 136 aa5.57□□□□□ -1.52
HTT-209ENST00000512068 MRPS16Q9Y3D3 137 aaKnown RBP5.57□□□□□ -1.52
HTT-209ENST00000512068 IGKV2D-26A0A0A0MRZ7 120 aa5.56□□□□□ -1.52
HTT-209ENST00000512068 IGHV1-58A0A0C4DH39 117 aa5.56□□□□□ -1.52
HTT-209ENST00000512068 IGLL5B9A064 214 aa5.56□□□□□ -1.52
HTT-209ENST00000512068 SPINK8P0C7L1 97 aa5.56□□□□□ -1.52
HTT-209ENST00000512068 CCL18P55774 89 aa5.56□□□□□ -1.52
HTT-209ENST00000512068 LINC00242Q5T6M2 205 aa5.56□□□□□ -1.52
HTT-209ENST00000512068 CLPSL2Q6UWE3 100 aa5.56□□□□□ -1.52
HTT-209ENST00000512068 FAM19A3Q7Z5A8 133 aa5.56□□□□□ -1.52
HTT-209ENST00000512068 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
HTT-209ENST00000512068 FAM104AQ969W3 186 aa5.56□□□□□ -1.52
HTT-209ENST00000512068 IGLV5-45A0A087WSX0 123 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 LINC00959A0A1B0GUT2 108 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 IGHV3-30P01768 117 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 IGHV3-33P01772 117 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 IGHV3-30-3P0DP02 117 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 IGHV3-30-5P0DP03 117 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 REG3AQ06141 175 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 HSD52Q0P140 79 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 LINC00269Q8N2A0 174 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 CDKN2A-AS1Q9UH64 79 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 DNAH3Q8TD57 4116 aa5.55□□□□□ -1.52
HTT-209ENST00000512068 NUPR2A6NF83 97 aa5.54□□□□□ -1.52
HTT-209ENST00000512068 XCL1P47992 114 aa5.54□□□□□ -1.52
HTT-209ENST00000512068 UBE2DNLQ8IWF7 75 aa5.54□□□□□ -1.52
HTT-209ENST00000512068 TTTY13Q9BZ97 58 aa5.54□□□□□ -1.52
HTT-209ENST00000512068 HIGD1BQ9P298 99 aa5.54□□□□□ -1.52
HTT-209ENST00000512068 KLK12Q9UKR0 248 aa5.54□□□□□ -1.52
HTT-209ENST00000512068 KLK5Q9Y337 293 aaPredicted RBP5.54□□□□□ -1.52
HTT-209ENST00000512068 TRAV8-3A0A0A6YYJ7 113 aa5.53□□□□□ -1.52
HTT-209ENST00000512068 PRSS2P07478 247 aa5.53□□□□□ -1.52
HTT-209ENST00000512068 HINT1P49773 126 aaPredicted RBP5.53□□□□□ -1.52
HTT-209ENST00000512068 COX6A2Q02221 97 aa5.53□□□□□ -1.52
HTT-209ENST00000512068 SRSF9Q13242 221 aaKnown RBP eCLIP5.53□□□□□ -1.52
HTT-209ENST00000512068 ESRGQ1W209 222 aa5.53□□□□□ -1.52
HTT-209ENST00000512068 LBHQ53QV2 105 aaPredicted RBP5.53□□□□□ -1.52
HTT-209ENST00000512068 HIST1H4GQ99525 98 aa5.53□□□□□ -1.52
HTT-209ENST00000512068 TP73-AS1Q9UF72 201 aa5.53□□□□□ -1.52
HTT-209ENST00000512068 NDUFA12Q9UI09 145 aa5.53□□□□□ -1.52
HTT-209ENST00000512068 NBEAL1Q6ZS30 2694 aa5.53□□□□□ -1.52
HTT-209ENST00000512068 TRAV8-4A0A0B4J246 113 aa5.52□□□□□ -1.53
HTT-209ENST00000512068 TMEM238C9JI98 176 aa5.52□□□□□ -1.53
HTT-209ENST00000512068 APOMO95445 188 aa5.52□□□□□ -1.53
HTT-209ENST00000512068 CIRBPQ14011 172 aaKnown RBP5.52□□□□□ -1.53
HTT-209ENST00000512068 TAL2Q16559 108 aa5.52□□□□□ -1.53
HTT-209ENST00000512068 C2orf91Q6ZV80 131 aa5.52□□□□□ -1.53
HTT-209ENST00000512068 WFDC10BQ8IUB3 73 aa5.52□□□□□ -1.53
HTT-209ENST00000512068 MAPKAPK5-AS1Q8N8E1 139 aa5.52□□□□□ -1.53
HTT-209ENST00000512068 CHCHD10Q8WYQ3 142 aaPredicted RBP5.52□□□□□ -1.53
HTT-209ENST00000512068 UBE2WQ96B02 151 aa5.52□□□□□ -1.53
HTT-209ENST00000512068 TOMM7Q9P0U1 55 aa5.52□□□□□ -1.53
HTT-209ENST00000512068 IGLV10-54A0A075B6I4 117 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 A0A087WZ39 114 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 A6NDN8 102 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 SMIM1B2RUZ4 78 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 COX7A2LO14548 114 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 TRIAP1O43715 76 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 TSPEAR-AS2P59090 65 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 MIAQ16674 131 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 LINC01556Q5JQF7 62 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 ZFAND6Q6FIF0 208 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 CFAP161Q6P656 301 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 SFTA2Q6UW10 78 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 CD164L2Q6UWJ8 174 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 C5orf38Q86SI9 138 aa5.51□□□□□ -1.53
HTT-209ENST00000512068 LINC01561Q8N1V8 128 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms