RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 ASIPP42127 132 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 VAMP8Q9BV40 100 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 PARP14Q460N5 1801 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 ARFGEF1Q9Y6D6 1849 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 ABCA12Q86UK0 2595 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 LRP6O75581 1613 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 RAPGEF6Q8TEU7 1601 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 TET3O43151 1660 aa0.3□□□□□ -2.36
PDGFC-207ENST00000511985 KIF21AQ7Z4S6 1674 aa0.3□□□□□ -2.36
PDGFC-207ENST00000511985 TOPAZ1Q8N9V7 1692 aa0.3□□□□□ -2.36
PDGFC-207ENST00000511985 IGF2RP11717 2491 aa0.3□□□□□ -2.36
PDGFC-207ENST00000511985 PMCHL1Q16048 86 aa0.3□□□□□ -2.36
PDGFC-207ENST00000511985 C10orf113Q5VZT2 155 aa0.3□□□□□ -2.36
PDGFC-207ENST00000511985 SPCS1Q9Y6A9 102 aa0.3□□□□□ -2.36
PDGFC-207ENST00000511985 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
PDGFC-207ENST00000511985 F5P12259 2224 aa0.3□□□□□ -2.36
PDGFC-207ENST00000511985 MED13LQ71F56 2210 aa0.3□□□□□ -2.36
PDGFC-207ENST00000511985 COL4A6Q14031 1691 aa0.3□□□□□ -2.36
PDGFC-207ENST00000511985 KMT2DO14686 5537 aa0.29□□□□□ -2.36
PDGFC-207ENST00000511985 LAMC1P11047 1609 aa0.29□□□□□ -2.36
PDGFC-207ENST00000511985 C7orf77A4D0Y5 90 aa0.29□□□□□ -2.36
PDGFC-207ENST00000511985 SYS1-DBNDD2H3BUS1 97 aa0.29□□□□□ -2.36
PDGFC-207ENST00000511985 I3L2K1 104 aa0.29□□□□□ -2.36
PDGFC-207ENST00000511985 UQCRHP07919 91 aa0.29□□□□□ -2.36
PDGFC-207ENST00000511985 PRO1933Q9H354 126 aa0.29□□□□□ -2.36
PDGFC-207ENST00000511985 PRO0255Q9UI72 69 aa0.29□□□□□ -2.36
PDGFC-207ENST00000511985 MYH9P35579 1960 aaKnown RBP0.28□□□□□ -2.36
PDGFC-207ENST00000511985 ERCC6L2Q5T890 1561 aa0.28□□□□□ -2.36
PDGFC-207ENST00000511985 TOP2BQ02880 1626 aa0.28□□□□□ -2.36
PDGFC-207ENST00000511985 FSIP2Q5CZC0 6907 aa0.28□□□□□ -2.36
PDGFC-207ENST00000511985 KDM5AP29375 1690 aaKnown RBP0.28□□□□□ -2.36
PDGFC-207ENST00000511985 TRBV6-1A0A0K0K1D8 114 aa0.28□□□□□ -2.36
PDGFC-207ENST00000511985 GYPAP02724 150 aa0.28□□□□□ -2.36
PDGFC-207ENST00000511985 FAUP35544 74 aaKnown RBP0.28□□□□□ -2.36
PDGFC-207ENST00000511985 PSMG4Q5JS54 123 aa0.28□□□□□ -2.36
PDGFC-207ENST00000511985 TP53AIP1Q9HCN2 124 aa0.28□□□□□ -2.36
PDGFC-207ENST00000511985 C1orf167Q5SNV9 1468 aa0.28□□□□□ -2.37
PDGFC-207ENST00000511985 PLEKHH2Q8IVE3 1493 aa0.28□□□□□ -2.37
PDGFC-207ENST00000511985 RAPGEF2Q9Y4G8 1499 aa0.28□□□□□ -2.37
PDGFC-207ENST00000511985 EPRSP07814 1512 aaKnown RBP0.28□□□□□ -2.37
PDGFC-207ENST00000511985 TULP4Q9NRJ4 1543 aa0.28□□□□□ -2.37
PDGFC-207ENST00000511985 ZNF236Q9UL36 1845 aa0.27□□□□□ -2.37
PDGFC-207ENST00000511985 UQCRHLA0A096LP55 91 aa0.27□□□□□ -2.37
PDGFC-207ENST00000511985 Q5BKY6 102 aa0.27□□□□□ -2.37
PDGFC-207ENST00000511985 Q8IZM0 81 aa0.27□□□□□ -2.37
PDGFC-207ENST00000511985 LINC01600Q96MT4 127 aa0.27□□□□□ -2.37
PDGFC-207ENST00000511985 V9GYS6 101 aa0.27□□□□□ -2.37
PDGFC-207ENST00000511985 SYNE1Q8NF91 8797 aaKnown RBP0.27□□□□□ -2.37
PDGFC-207ENST00000511985 NRXN1Q9ULB1 1477 aa0.27□□□□□ -2.37
PDGFC-207ENST00000511985 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
PDGFC-207ENST00000511985 A0A087WVE0 104 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 TRBV7-4A0A0J9YYF1 115 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 LINC00959A0A1B0GUT2 108 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 ARMS2P0C7Q2 107 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 HMGN3Q15651 99 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 PIGYQ3MUY2 71 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 DEFB123Q8N688 67 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 LCN9Q8WX39 176 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 C20orf78Q9BR46 151 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 Q9H521 79 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 FANCAO15360 1455 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 POLA1P09884 1462 aaPredicted RBP0.26□□□□□ -2.37
PDGFC-207ENST00000511985 IQSEC2Q5JU85 1478 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 ABCC2Q92887 1545 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 ARHGEF12Q9NZN5 1544 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 SMARCA2P51531 1590 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 TTC37Q6PGP7 1564 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 CHD1O14646 1710 aa0.26□□□□□ -2.37
PDGFC-207ENST00000511985 MYH8P13535 1937 aa0.25□□□□□ -2.37
PDGFC-207ENST00000511985 MARF1Q9Y4F3 1742 aaKnown RBP0.25□□□□□ -2.37
PDGFC-207ENST00000511985 H3BQF6 201 aa0.25□□□□□ -2.37
PDGFC-207ENST00000511985 GNG2P59768 71 aa0.25□□□□□ -2.37
PDGFC-207ENST00000511985 PYY3Q5JQD4 70 aa0.25□□□□□ -2.37
PDGFC-207ENST00000511985 ALKAL2Q6UX46 152 aa0.25□□□□□ -2.37
PDGFC-207ENST00000511985 FDCSPQ8NFU4 85 aa0.25□□□□□ -2.37
PDGFC-207ENST00000511985 HIGD1BQ9P298 99 aa0.25□□□□□ -2.37
PDGFC-207ENST00000511985 POLQO75417 2590 aa0.25□□□□□ -2.37
PDGFC-207ENST00000511985 PI4KAP42356 2102 aa0.25□□□□□ -2.37
PDGFC-207ENST00000511985 DOCK2Q92608 1830 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 ATP10BO94823 1461 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 F8P00451 2351 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 CEP162Q5TB80 1403 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 PVALEFA0A1B0GWK0 134 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 H0Y9P7 68 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 SPINK1P00995 79 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 WFDC2Q14508 124 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 ETDBQ3ZM63 59 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 ZNF720Q7Z2F6 126 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 C9orf62Q8N4C0 152 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 PSENENQ9NZ42 101 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 IGSF10Q6WRI0 2623 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 PSME4Q14997 1843 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 KDM3BQ7LBC6 1761 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 ABCA3Q99758 1704 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 BIVM-ERCC5R4GMW8 1640 aa0.24□□□□□ -2.37
PDGFC-207ENST00000511985 CADP27708 2225 aa0.23□□□□□ -2.37
PDGFC-207ENST00000511985 NLRP1Q9C000 1473 aa0.23□□□□□ -2.37
PDGFC-207ENST00000511985 F8WEM9 126 aa0.23□□□□□ -2.37
PDGFC-207ENST00000511985 K7EP34 96 aa0.23□□□□□ -2.37
PDGFC-207ENST00000511985 Q5VSD8 79 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms