RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 LINC01556Q5JQF7 62 aa3.62□□□□□ -1.83
PTPN13-209ENST00000511467 FAM19A3Q7Z5A8 133 aa3.62□□□□□ -1.83
PTPN13-209ENST00000511467 LINC01006Q8NI28 216 aa3.62□□□□□ -1.83
PTPN13-209ENST00000511467 RPL39LQ96EH5 51 aaKnown RBP3.62□□□□□ -1.83
PTPN13-209ENST00000511467 CENPFP49454 3210 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 USP17L23D6RBM5 183 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 DEFB135Q30KP9 77 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 KLK12Q9UKR0 248 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 A0A0J9YY99 117 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 Q6ZUT4 128 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 SERP2Q8N6R1 65 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 CDC42SE2Q9NRR3 84 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.61□□□□□ -1.83
PTPN13-209ENST00000511467 TRAV7A0A075B6U4 112 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 IGLV5-45A0A087WSX0 123 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 IGKV2-29A2NJV5 120 aaPredicted RBP3.61□□□□□ -1.83
PTPN13-209ENST00000511467 LY6HO94772 140 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 IGLV2-8P01709 118 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 IGHV3-33P01772 117 aa3.61□□□□□ -1.83
PTPN13-209ENST00000511467 C5orf47Q569G3 176 aa3.6□□□□□ -1.83
PTPN13-209ENST00000511467 hDV103S1A0JD37 113 aa3.6□□□□□ -1.83
PTPN13-209ENST00000511467 FXYD7P58549 80 aa3.6□□□□□ -1.83
PTPN13-209ENST00000511467 TEX15Q9BXT5 2789 aa3.6□□□□□ -1.83
PTPN13-209ENST00000511467 NSD1Q96L73 2696 aaPredicted RBP3.6□□□□□ -1.83
PTPN13-209ENST00000511467 TEX49A0A1B0GTD5 131 aa3.6□□□□□ -1.83
PTPN13-209ENST00000511467 MLANAQ16655 118 aa3.6□□□□□ -1.83
PTPN13-209ENST00000511467 MRPS12O15235 138 aaKnown RBP3.6□□□□□ -1.83
PTPN13-209ENST00000511467 REG3GQ6UW15 175 aa3.6□□□□□ -1.83
PTPN13-209ENST00000511467 UNQ9165/PRO28630Q6UXU0 137 aa3.6□□□□□ -1.83
PTPN13-209ENST00000511467 MSRB1Q9NZV6 116 aa3.6□□□□□ -1.83
PTPN13-209ENST00000511467 IGIPA6NJ69 53 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 ERC2-IT1O76042 136 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 TSHBP01222 138 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 C5orf38Q86SI9 138 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 SPATA3Q8NHX4 192 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 A0A0J9YXV3 536 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 IGHV3-30P01768 117 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 IGHV3-30-5P0DP03 117 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 RNASE3P12724 160 aaKnown RBP3.59□□□□□ -1.83
PTPN13-209ENST00000511467 A8MTW9 85 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 LINC00269Q8N2A0 174 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 LECT2O14960 151 aa3.59□□□□□ -1.83
PTPN13-209ENST00000511467 RBX1P62877 108 aa3.59□□□□□ -1.84
PTPN13-209ENST00000511467 CASC2Q6XLA1 102 aa3.59□□□□□ -1.84
PTPN13-209ENST00000511467 CHD6Q8TD26 2715 aa3.59□□□□□ -1.84
PTPN13-209ENST00000511467 LINC00336Q6ZUF6 198 aa3.59□□□□□ -1.84
PTPN13-209ENST00000511467 CRIP3Q6Q6R5 217 aa3.58□□□□□ -1.84
PTPN13-209ENST00000511467 FAM19A4Q96LR4 140 aa3.58□□□□□ -1.84
PTPN13-209ENST00000511467 EDN2P20800 178 aa3.58□□□□□ -1.84
PTPN13-209ENST00000511467 ZNF73O43830 326 aaPredicted RBP3.58□□□□□ -1.84
PTPN13-209ENST00000511467 IGHV4-28A0A0C4DH34 117 aa3.58□□□□□ -1.84
PTPN13-209ENST00000511467 LY6G6DO95868 133 aa3.58□□□□□ -1.84
PTPN13-209ENST00000511467 ASPHD1Q5U4P2 390 aa3.58□□□□□ -1.84
PTPN13-209ENST00000511467 NDUFS5O43920 106 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 NDUFV3P56181 108 aaKnown RBP3.57□□□□□ -1.84
PTPN13-209ENST00000511467 SERP1Q9Y6X1 66 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 PCP2Q8IVA1 136 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 ZNF581Q9P0T4 197 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 LINC00959A0A1B0GUT2 108 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 C3orf84H3BNL1 204 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 WISP2O76076 250 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 CCKP06307 115 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 C3orf22Q8N5N4 141 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 GRNP28799 593 aaKnown RBP3.57□□□□□ -1.84
PTPN13-209ENST00000511467 WFDC9Q8NEX5 89 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 DEFB136Q30KP8 78 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 SPAG11AQ6PDA7 123 aa3.57□□□□□ -1.84
PTPN13-209ENST00000511467 HCG22E2RYF7 251 aa3.56□□□□□ -1.84
PTPN13-209ENST00000511467 PLA2G2DQ9UNK4 145 aa3.56□□□□□ -1.84
PTPN13-209ENST00000511467 FAM236AA0A1B0GUQ0 79 aa3.56□□□□□ -1.84
PTPN13-209ENST00000511467 FAM236BA0A1B0GV22 79 aa3.56□□□□□ -1.84
PTPN13-209ENST00000511467 PROK1P58294 105 aa3.56□□□□□ -1.84
PTPN13-209ENST00000511467 BRWD1-AS2P59051 145 aa3.56□□□□□ -1.84
PTPN13-209ENST00000511467 ZNF295-AS1Q8N0V1 137 aa3.56□□□□□ -1.84
PTPN13-209ENST00000511467 TFF1P04155 84 aa3.56□□□□□ -1.84
PTPN13-209ENST00000511467 Q9HAA7 133 aa3.56□□□□□ -1.84
PTPN13-209ENST00000511467 MAP1AP78559 2803 aaPredicted RBP3.56□□□□□ -1.84
PTPN13-209ENST00000511467 IGLV5-39A0A0G2JS06 123 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 DNAH10OSP0CZ25 163 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 LINC00205P59089 165 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 RPS28P62857 69 aaKnown RBP3.55□□□□□ -1.84
PTPN13-209ENST00000511467 Q6ZTI0 123 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 CDKN2A-AS1Q9UH64 79 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 KIF25-AS1Q9Y6Z4 181 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 Q6ZQT7 251 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 Q8N814 137 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 LOC110117498A0A087WWA1 95 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 MSMPQ1L6U9 139 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.55□□□□□ -1.84
PTPN13-209ENST00000511467 A0A0U1RRA0 63 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 FXYD2P54710 66 aa3.55□□□□□ -1.84
PTPN13-209ENST00000511467 COX7CP15954 63 aa3.54□□□□□ -1.84
PTPN13-209ENST00000511467 RPL39P62891 51 aaKnown RBP3.54□□□□□ -1.84
PTPN13-209ENST00000511467 Q8N9L7 120 aa3.54□□□□□ -1.84
PTPN13-209ENST00000511467 H0Y9J4 135 aa3.54□□□□□ -1.84
PTPN13-209ENST00000511467 LINC00337Q8N6G1 96 aa3.54□□□□□ -1.84
PTPN13-209ENST00000511467 C20orf173Q96LM9 149 aa3.54□□□□□ -1.84
PTPN13-209ENST00000511467 FAM236DA0A1B0GTK5 79 aa3.54□□□□□ -1.84
PTPN13-209ENST00000511467 FAM236CP0DP71 79 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms