RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 HBG1P69891 147 aa3.11□□□□□ -1.91
USP53-206ENST00000510737 HBG2P69892 147 aa3.11□□□□□ -1.91
USP53-206ENST00000510737 KRTAP13-1Q8IUC0 172 aa3.11□□□□□ -1.91
USP53-206ENST00000510737 C5orf17Q8NAS9 161 aa3.11□□□□□ -1.91
USP53-206ENST00000510737 AP3S1Q92572 193 aa3.11□□□□□ -1.91
USP53-206ENST00000510737 FUNDC2Q9BWH2 189 aa3.11□□□□□ -1.91
USP53-206ENST00000510737 WDR61Q9GZS3 305 aaKnown RBP3.11□□□□□ -1.91
USP53-206ENST00000510737 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
USP53-206ENST00000510737 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
USP53-206ENST00000510737 HMGB3O15347 200 aaKnown RBP3.1□□□□□ -1.91
USP53-206ENST00000510737 RGS5O15539 181 aa3.1□□□□□ -1.91
USP53-206ENST00000510737 RPL28P46779 137 aaKnown RBP3.1□□□□□ -1.91
USP53-206ENST00000510737 AMMECR1LQ6DCA0 310 aa3.1□□□□□ -1.91
USP53-206ENST00000510737 RNASEKQ6P5S7 137 aaKnown RBP3.1□□□□□ -1.91
USP53-206ENST00000510737 SPAG11AQ6PDA7 123 aa3.1□□□□□ -1.91
USP53-206ENST00000510737 COX6B2Q6YFQ2 88 aa3.1□□□□□ -1.91
USP53-206ENST00000510737 C3orf22Q8N5N4 141 aa3.1□□□□□ -1.91
USP53-206ENST00000510737 DAND5Q8N907 189 aa3.1□□□□□ -1.91
USP53-206ENST00000510737 BCE1O60756 84 aa3.09□□□□□ -1.91
USP53-206ENST00000510737 IL15RAQ13261 267 aa3.09□□□□□ -1.91
USP53-206ENST00000510737 COTL1Q14019 142 aa3.09□□□□□ -1.91
USP53-206ENST00000510737 STX12Q86Y82 276 aa3.09□□□□□ -1.91
USP53-206ENST00000510737 OR2D3Q8NGH3 330 aa3.09□□□□□ -1.91
USP53-206ENST00000510737 IMMP2LQ96T52 175 aa3.09□□□□□ -1.91
USP53-206ENST00000510737 MRPL35Q9NZE8 188 aaKnown RBP3.09□□□□□ -1.91
USP53-206ENST00000510737 G3V3Q6 166 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 COX7A2LO14548 114 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 FAUP35544 74 aaKnown RBP3.08□□□□□ -1.92
USP53-206ENST00000510737 MOBPQ13875 183 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 RASL11AQ6T310 242 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 UNQ6190/PRO20217Q6UXQ8 127 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 SMDT1Q9H4I9 107 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 NIT2Q9NQR4 276 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 LINC00846Q9NV44 126 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 C6orf48Q9UBA6 75 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 UBE2D4Q9Y2X8 147 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 C22orf24Q9Y442 160 aa3.08□□□□□ -1.92
USP53-206ENST00000510737 C17orf112F2Z3M2 114 aa3.07□□□□□ -1.92
USP53-206ENST00000510737 MGPP08493 103 aa3.07□□□□□ -1.92
USP53-206ENST00000510737 SMIM17P0DL12 118 aa3.07□□□□□ -1.92
USP53-206ENST00000510737 PVALBP20472 110 aaPredicted RBP3.07□□□□□ -1.92
USP53-206ENST00000510737 NTF3P20783 257 aa3.07□□□□□ -1.92
USP53-206ENST00000510737 SPANXN1Q5VSR9 72 aa3.07□□□□□ -1.92
USP53-206ENST00000510737 C5orf38Q86SI9 138 aa3.07□□□□□ -1.92
USP53-206ENST00000510737 TOMM5Q8N4H5 51 aa3.07□□□□□ -1.92
USP53-206ENST00000510737 MRPS26Q9BYN8 205 aaKnown RBP3.07□□□□□ -1.92
USP53-206ENST00000510737 CDC42SE2Q9NRR3 84 aa3.07□□□□□ -1.92
USP53-206ENST00000510737 KCNIP2Q9NS61 270 aa3.07□□□□□ -1.92
USP53-206ENST00000510737 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 A0A1W2PPV4 95 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 FAM25EA8MYX2 175 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 ATP6V1G1O75348 118 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 NDUFB6O95139 128 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 MT2AP02795 61 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 OR5AL1P0C617 328 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 ARL14EPLP0DKL9 152 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 CTRLP40313 264 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 SPAG11BQ08648 103 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 TMEM241Q24JQ0 296 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 Q86TA4 180 aa3.06□□□□□ -1.92
USP53-206ENST00000510737 STAG3L2P0CL84 134 aa3.05□□□□□ -1.92
USP53-206ENST00000510737 STAG3L3P0CL85 134 aa3.05□□□□□ -1.92
USP53-206ENST00000510737 ZNF25P17030 456 aaPredicted RBP3.05□□□□□ -1.92
USP53-206ENST00000510737 GCHFRP30047 84 aa3.05□□□□□ -1.92
USP53-206ENST00000510737 VCX3BQ9H321 246 aa3.05□□□□□ -1.92
USP53-206ENST00000510737 ZFP30Q9Y2G7 519 aa3.05□□□□□ -1.92
USP53-206ENST00000510737 C1orf196B1AJZ1 125 aa3.04□□□□□ -1.92
USP53-206ENST00000510737 NDUFA1O15239 70 aa3.04□□□□□ -1.92
USP53-206ENST00000510737 MT1FP04733 61 aa3.04□□□□□ -1.92
USP53-206ENST00000510737 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
USP53-206ENST00000510737 AP3S2P59780 193 aa3.04□□□□□ -1.92
USP53-206ENST00000510737 TMEM101Q96IK0 257 aa3.04□□□□□ -1.92
USP53-206ENST00000510737 BTF3L4Q96K17 158 aa3.04□□□□□ -1.92
USP53-206ENST00000510737 AP1S3Q96PC3 154 aa3.04□□□□□ -1.92
USP53-206ENST00000510737 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
USP53-206ENST00000510737 F8WDY8 70 aa3.03□□□□□ -1.92
USP53-206ENST00000510737 PEX7O00628 323 aa3.03□□□□□ -1.92
USP53-206ENST00000510737 NCR2O95944 276 aa3.03□□□□□ -1.92
USP53-206ENST00000510737 CXCL1P09341 107 aa3.03□□□□□ -1.92
USP53-206ENST00000510737 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
USP53-206ENST00000510737 OR10D4PQ8NGN7 298 aa3.03□□□□□ -1.92
USP53-206ENST00000510737 MARVELD1Q9BSK0 173 aa3.03□□□□□ -1.92
USP53-206ENST00000510737 ALG5Q9Y673 324 aa3.03□□□□□ -1.92
USP53-206ENST00000510737 A0A1W2PRE2 83 aa3.02□□□□□ -1.93
USP53-206ENST00000510737 NDUFC2-KCTD14E9PQ53 114 aa3.02□□□□□ -1.93
USP53-206ENST00000510737 SPINK1P00995 79 aa3.02□□□□□ -1.93
USP53-206ENST00000510737 LTAP01374 205 aa3.02□□□□□ -1.93
USP53-206ENST00000510737 APCSP02743 223 aa3.02□□□□□ -1.93
USP53-206ENST00000510737 GATD1Q8NB37 220 aa3.02□□□□□ -1.93
USP53-206ENST00000510737 SCGB1C1Q8TD33 95 aa3.02□□□□□ -1.93
USP53-206ENST00000510737 ORAOV1Q8WV07 137 aa3.02□□□□□ -1.93
USP53-206ENST00000510737 DEDD2Q8WXF8 326 aa3.02□□□□□ -1.93
USP53-206ENST00000510737 PLEKHB2Q96CS7 222 aa3.02□□□□□ -1.93
USP53-206ENST00000510737 PACRGQ96M98 296 aaPredicted RBP3.02□□□□□ -1.93
USP53-206ENST00000510737 A0A087WXM4 84 aa3.01□□□□□ -1.93
USP53-206ENST00000510737 TRAV13-1A0A0B4J241 112 aa3.01□□□□□ -1.93
USP53-206ENST00000510737 UPK1BO75841 260 aa3.01□□□□□ -1.93
USP53-206ENST00000510737 CDC34P49427 236 aaPredicted RBP3.01□□□□□ -1.93
USP53-206ENST00000510737 UBE2AP49459 152 aa3.01□□□□□ -1.93
USP53-206ENST00000510737 RPL32P62910 135 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms