RNA–Protein interactions for RNA: ENST00000509534.5

SIL1-213, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene SIL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-213ENST00000509534 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.78□□□□□ -0.52
SIL1-213ENST00000509534 IGKV2-29A2NJV5 120 aaPredicted RBP11.78□□□□□ -0.52
SIL1-213ENST00000509534 MRPS36P82909 103 aaKnown RBP11.78□□□□□ -0.52
SIL1-213ENST00000509534 CEMP1Q6PRD7 247 aaPredicted RBP11.78□□□□□ -0.52
SIL1-213ENST00000509534 SH2D6Q7Z4S9 175 aa11.78□□□□□ -0.52
SIL1-213ENST00000509534 Q6ZUT4 128 aa11.76□□□□□ -0.53
SIL1-213ENST00000509534 DNAH7Q8WXX0 4024 aa11.76□□□□□ -0.53
SIL1-213ENST00000509534 TINCRA0A1B0GVN0 87 aa11.75□□□□□ -0.53
SIL1-213ENST00000509534 RNASE13Q5GAN3 156 aaKnown RBP11.75□□□□□ -0.53
SIL1-213ENST00000509534 TIMM21Q9BVV7 248 aa11.75□□□□□ -0.53
SIL1-213ENST00000509534 GTSF1LQ9H1H1 148 aa11.75□□□□□ -0.53
SIL1-213ENST00000509534 UBE2D1P51668 147 aa11.74□□□□□ -0.53
SIL1-213ENST00000509534 C15orf53Q8NAA6 179 aa11.74□□□□□ -0.53
SIL1-213ENST00000509534 TGP01266 2768 aa11.74□□□□□ -0.53
SIL1-213ENST00000509534 IGHV3-64A0A075B6Q5 118 aa11.74□□□□□ -0.53
SIL1-213ENST00000509534 OCIAD2Q56VL3 154 aa11.74□□□□□ -0.53
SIL1-213ENST00000509534 IGHV3-30P01768 117 aa11.73□□□□□ -0.53
SIL1-213ENST00000509534 IGHV3-30-5P0DP03 117 aa11.73□□□□□ -0.53
SIL1-213ENST00000509534 NTM-AS1Q6ZSK4 140 aa11.73□□□□□ -0.53
SIL1-213ENST00000509534 TRBV6-8A0A0A6YYG3 113 aa11.72□□□□□ -0.53
SIL1-213ENST00000509534 NUPR2A6NF83 97 aa11.72□□□□□ -0.53
SIL1-213ENST00000509534 IGHV3-30-3P0DP02 117 aa11.72□□□□□ -0.53
SIL1-213ENST00000509534 TMEM243Q9BU79 118 aa11.72□□□□□ -0.53
SIL1-213ENST00000509534 UBE2L6O14933 153 aa11.71□□□□□ -0.54
SIL1-213ENST00000509534 RBX1P62877 108 aa11.71□□□□□ -0.54
SIL1-213ENST00000509534 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.54
SIL1-213ENST00000509534 IGHV1-58A0A0C4DH39 117 aa11.7□□□□□ -0.54
SIL1-213ENST00000509534 DGAT2L7PQ6IED9 249 aa11.7□□□□□ -0.54
SIL1-213ENST00000509534 KLK5Q9Y337 293 aaPredicted RBP11.7□□□□□ -0.54
SIL1-213ENST00000509534 CBY1Q9Y3M2 126 aa11.7□□□□□ -0.54
SIL1-213ENST00000509534 TMEM238C9JI98 176 aa11.69□□□□□ -0.54
SIL1-213ENST00000509534 CHCHD5Q9BSY4 110 aa11.69□□□□□ -0.54
SIL1-213ENST00000509534 GEMIN7Q9H840 131 aaKnown RBP11.69□□□□□ -0.54
SIL1-213ENST00000509534 DYNC2H1Q8NCM8 4307 aaKnown RBP11.69□□□□□ -0.54
SIL1-213ENST00000509534 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
SIL1-213ENST00000509534 LYPD5Q6UWN5 251 aa11.69□□□□□ -0.54
SIL1-213ENST00000509534 C10orf126Q8N4M7 172 aa11.69□□□□□ -0.54
SIL1-213ENST00000509534 TRAV8-3A0A0A6YYJ7 113 aa11.68□□□□□ -0.54
SIL1-213ENST00000509534 A0A0J9YXY3 114 aa11.68□□□□□ -0.54
SIL1-213ENST00000509534 K7ERU9 68 aa11.68□□□□□ -0.54
SIL1-213ENST00000509534 APOMO95445 188 aa11.68□□□□□ -0.54
SIL1-213ENST00000509534 TIRAPP58753 221 aa11.68□□□□□ -0.54
SIL1-213ENST00000509534 LELP1Q5T871 98 aa11.68□□□□□ -0.54
SIL1-213ENST00000509534 TSPAN13O95857 204 aa11.67□□□□□ -0.54
SIL1-213ENST00000509534 IGLV5-45A0A087WSX0 123 aa11.66□□□□□ -0.54
SIL1-213ENST00000509534 SPINK8P0C7L1 97 aa11.66□□□□□ -0.54
SIL1-213ENST00000509534 GAGE6Q13070 117 aa11.66□□□□□ -0.54
SIL1-213ENST00000509534 CSDC2Q9Y534 153 aaKnown RBP11.66□□□□□ -0.54
SIL1-213ENST00000509534 CSMD3Q7Z407 3707 aa11.66□□□□□ -0.54
SIL1-213ENST00000509534 H7C423 109 aa11.66□□□□□ -0.54
SIL1-213ENST00000509534 CFC1BP0CG36 223 aa11.66□□□□□ -0.54
SIL1-213ENST00000509534 CFC1P0CG37 223 aa11.66□□□□□ -0.54
SIL1-213ENST00000509534 ESRGQ1W209 222 aa11.66□□□□□ -0.54
SIL1-213ENST00000509534 RNF151Q2KHN1 245 aa11.66□□□□□ -0.54
SIL1-213ENST00000509534 WWC2-AS2Q96NR7 200 aa11.66□□□□□ -0.54
SIL1-213ENST00000509534 RPL24P83731 157 aaKnown RBP11.65□□□□□ -0.54
SIL1-213ENST00000509534 ZFAND6Q6FIF0 208 aa11.65□□□□□ -0.54
SIL1-213ENST00000509534 FAM19A3Q7Z5A8 133 aa11.65□□□□□ -0.54
SIL1-213ENST00000509534 NDUFA12Q9UI09 145 aa11.65□□□□□ -0.54
SIL1-213ENST00000509534 TMEM262E9PQX1 116 aa11.64□□□□□ -0.55
SIL1-213ENST00000509534 MUC7Q8TAX7 377 aa11.64□□□□□ -0.55
SIL1-213ENST00000509534 F8W1H4 67 aa11.63□□□□□ -0.55
SIL1-213ENST00000509534 HERVK_113P63121 156 aa11.63□□□□□ -0.55
SIL1-213ENST00000509534 LYRM7Q5U5X0 104 aa11.63□□□□□ -0.55
SIL1-213ENST00000509534 CDKN2A-AS1Q9UH64 79 aa11.63□□□□□ -0.55
SIL1-213ENST00000509534 A4D1N5 150 aa11.63□□□□□ -0.55
SIL1-213ENST00000509534 H3BMG7 143 aa11.63□□□□□ -0.55
SIL1-213ENST00000509534 CCL18P55774 89 aa11.63□□□□□ -0.55
SIL1-213ENST00000509534 MUSTN1Q8IVN3 82 aa11.63□□□□□ -0.55
SIL1-213ENST00000509534 TMEM101Q96IK0 257 aa11.63□□□□□ -0.55
SIL1-213ENST00000509534 APLNQ9ULZ1 77 aa11.63□□□□□ -0.55
SIL1-213ENST00000509534 LITAFQ99732 161 aa11.62□□□□□ -0.55
SIL1-213ENST00000509534 SPANXDQ9BXN6 97 aa11.62□□□□□ -0.55
SIL1-213ENST00000509534 SPANXCQ9NY87 97 aa11.62□□□□□ -0.55
SIL1-213ENST00000509534 PRO1854Q9UHT4 67 aa11.62□□□□□ -0.55
SIL1-213ENST00000509534 A0A0B4J2C4 111 aa11.61□□□□□ -0.55
SIL1-213ENST00000509534 LINC00242Q5T6M2 205 aa11.61□□□□□ -0.55
SIL1-213ENST00000509534 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.6□□□□□ -0.55
SIL1-213ENST00000509534 LOC107984156A0A0G2JMH3 177 aa11.6□□□□□ -0.55
SIL1-213ENST00000509534 COX6A2Q02221 97 aa11.6□□□□□ -0.55
SIL1-213ENST00000509534 ARL17AQ8IVW1 177 aa11.6□□□□□ -0.55
SIL1-213ENST00000509534 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
SIL1-213ENST00000509534 LINC00588Q9Y4M8 146 aa11.6□□□□□ -0.55
SIL1-213ENST00000509534 STARD9Q9P2P6 4700 aa11.59□□□□□ -0.55
SIL1-213ENST00000509534 NDUFA1O15239 70 aa11.59□□□□□ -0.55
SIL1-213ENST00000509534 TIMM17BO60830 172 aa11.59□□□□□ -0.55
SIL1-213ENST00000509534 WFDC10BQ8IUB3 73 aa11.59□□□□□ -0.55
SIL1-213ENST00000509534 VPS25Q9BRG1 176 aa11.59□□□□□ -0.55
SIL1-213ENST00000509534 IGLV5-39A0A0G2JS06 123 aa11.58□□□□□ -0.56
SIL1-213ENST00000509534 MIAQ16674 131 aa11.58□□□□□ -0.56
SIL1-213ENST00000509534 PRO0461Q9UI25 63 aa11.58□□□□□ -0.56
SIL1-213ENST00000509534 TRAV13-1A0A0B4J241 112 aa11.57□□□□□ -0.56
SIL1-213ENST00000509534 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
SIL1-213ENST00000509534 WFDC2Q14508 124 aa11.57□□□□□ -0.56
SIL1-213ENST00000509534 UBE2DNLQ8IWF7 75 aa11.57□□□□□ -0.56
SIL1-213ENST00000509534 A0A1B0GUV1 79 aa11.57□□□□□ -0.56
SIL1-213ENST00000509534 IGHV3-33P01772 117 aa11.57□□□□□ -0.56
SIL1-213ENST00000509534 PSMB2P49721 201 aa11.57□□□□□ -0.56
SIL1-213ENST00000509534 SFTA2Q6UW10 78 aa11.57□□□□□ -0.56
SIL1-213ENST00000509534 PLECQ15149 4684 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms