RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.39
SFXN1-205ENST00000506963 SEC11AP67812 179 aa6.34□□□□□ -1.39
SFXN1-205ENST00000506963 BAGE3Q86Y29 109 aa6.34□□□□□ -1.39
SFXN1-205ENST00000506963 LINC01561Q8N1V8 128 aa6.34□□□□□ -1.39
SFXN1-205ENST00000506963 PKHD1P08F94 4074 aa6.34□□□□□ -1.4
SFXN1-205ENST00000506963 A0A087WZ39 114 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST1H2BKO60814 126 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HSBP1O75506 76 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 SERF1AO75920 110 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST1H2BJP06899 126 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 GCSHP23434 173 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST1H2BOP23527 126 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST1H2BBP33778 126 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST1H2BDP58876 126 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST1H2BCP62807 126 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 PMVKQ15126 192 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST2H2BEQ16778 126 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST1H2BHQ93079 126 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST1H2BNQ99877 126 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 HIST1H2BMQ99879 126 aa6.33□□□□□ -1.4
SFXN1-205ENST00000506963 DYNC1H1Q14204 4646 aaKnown RBP6.33□□□□□ -1.4
SFXN1-205ENST00000506963 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.32□□□□□ -1.4
SFXN1-205ENST00000506963 hDV102S1A0JD36 115 aa6.32□□□□□ -1.4
SFXN1-205ENST00000506963 APOMO95445 188 aa6.32□□□□□ -1.4
SFXN1-205ENST00000506963 HERVK_113P63121 156 aa6.32□□□□□ -1.4
SFXN1-205ENST00000506963 COX6A2Q02221 97 aa6.32□□□□□ -1.4
SFXN1-205ENST00000506963 PMCHL1Q16048 86 aa6.32□□□□□ -1.4
SFXN1-205ENST00000506963 ZC2HC1BQ5TFG8 222 aa6.32□□□□□ -1.4
SFXN1-205ENST00000506963 CST9LQ9H4G1 147 aa6.32□□□□□ -1.4
SFXN1-205ENST00000506963 DNAH5Q8TE73 4624 aa6.32□□□□□ -1.4
SFXN1-205ENST00000506963 IGHV3-64A0A075B6Q5 118 aa6.31□□□□□ -1.4
SFXN1-205ENST00000506963 IGLV5-45A0A087WSX0 123 aa6.31□□□□□ -1.4
SFXN1-205ENST00000506963 CDK2AP2O75956 126 aa6.31□□□□□ -1.4
SFXN1-205ENST00000506963 SLPIP03973 132 aa6.31□□□□□ -1.4
SFXN1-205ENST00000506963 MALP21145 153 aa6.31□□□□□ -1.4
SFXN1-205ENST00000506963 FUSP35637 526 aaKnown RBP eCLIP6.31□□□□□ -1.4
SFXN1-205ENST00000506963 KRTAP10-1P60331 282 aa6.31□□□□□ -1.4
SFXN1-205ENST00000506963 COA6Q5JTJ3 125 aaKnown RBP6.31□□□□□ -1.4
SFXN1-205ENST00000506963 C5orf38Q86SI9 138 aa6.31□□□□□ -1.4
SFXN1-205ENST00000506963 C9orf163Q8N9P6 203 aa6.31□□□□□ -1.4
SFXN1-205ENST00000506963 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
SFXN1-205ENST00000506963 A0A0J9YXV3 536 aa6.3□□□□□ -1.4
SFXN1-205ENST00000506963 TINCRA0A1B0GVN0 87 aa6.3□□□□□ -1.4
SFXN1-205ENST00000506963 F8WDY8 70 aa6.3□□□□□ -1.4
SFXN1-205ENST00000506963 NUPR1O60356 82 aa6.3□□□□□ -1.4
SFXN1-205ENST00000506963 Q6ZSA8 131 aa6.3□□□□□ -1.4
SFXN1-205ENST00000506963 C2orf48Q96LS8 159 aa6.3□□□□□ -1.4
SFXN1-205ENST00000506963 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.29□□□□□ -1.4
SFXN1-205ENST00000506963 TRAV12-1A0A0B4J245 112 aa6.29□□□□□ -1.4
SFXN1-205ENST00000506963 IGLC3P0DOY3 106 aa6.29□□□□□ -1.4
SFXN1-205ENST00000506963 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
SFXN1-205ENST00000506963 FAM19A2Q8N3H0 131 aa6.29□□□□□ -1.4
SFXN1-205ENST00000506963 IFI27L1Q96BM0 104 aa6.29□□□□□ -1.4
SFXN1-205ENST00000506963 PACRGQ96M98 296 aaPredicted RBP6.29□□□□□ -1.4
SFXN1-205ENST00000506963 GEMIN7Q9H840 131 aaKnown RBP6.29□□□□□ -1.4
SFXN1-205ENST00000506963 LRP1BQ9NZR2 4599 aa6.29□□□□□ -1.4
SFXN1-205ENST00000506963 ZNF561-AS1K7EIQ3 104 aa6.28□□□□□ -1.4
SFXN1-205ENST00000506963 LEPROTL1O95214 131 aa6.28□□□□□ -1.4
SFXN1-205ENST00000506963 SDIM1Q6ZPB5 146 aa6.28□□□□□ -1.4
SFXN1-205ENST00000506963 CDKN2A-AS1Q9UH64 79 aa6.28□□□□□ -1.4
SFXN1-205ENST00000506963 KIAA1109Q2LD37 5005 aa6.28□□□□□ -1.4
SFXN1-205ENST00000506963 IGLV4-69A0A075B6H9 119 aa6.27□□□□□ -1.41
SFXN1-205ENST00000506963 SPAG11BQ08648 103 aa6.27□□□□□ -1.41
SFXN1-205ENST00000506963 KIAA0087Q14695 138 aa6.27□□□□□ -1.41
SFXN1-205ENST00000506963 ORAOV1Q8WV07 137 aa6.27□□□□□ -1.41
SFXN1-205ENST00000506963 HSPB8Q9UJY1 196 aa6.27□□□□□ -1.41
SFXN1-205ENST00000506963 SYCNQ0VAF6 134 aa6.26□□□□□ -1.41
SFXN1-205ENST00000506963 RNF151Q2KHN1 245 aa6.26□□□□□ -1.41
SFXN1-205ENST00000506963 LINC00469Q8N7U9 141 aa6.26□□□□□ -1.41
SFXN1-205ENST00000506963 CARD19Q96LW7 228 aa6.26□□□□□ -1.41
SFXN1-205ENST00000506963 CHAC1Q9BUX1 264 aa6.26□□□□□ -1.41
SFXN1-205ENST00000506963 MRPL35Q9NZE8 188 aaKnown RBP6.26□□□□□ -1.41
SFXN1-205ENST00000506963 PKIGQ9Y2B9 76 aa6.26□□□□□ -1.41
SFXN1-205ENST00000506963 SMIM1B2RUZ4 78 aa6.25□□□□□ -1.41
SFXN1-205ENST00000506963 F8VRH5 84 aa6.25□□□□□ -1.41
SFXN1-205ENST00000506963 XGP55808 180 aa6.25□□□□□ -1.41
SFXN1-205ENST00000506963 NDUFA6P56556 154 aa6.25□□□□□ -1.41
SFXN1-205ENST00000506963 CIRBPQ14011 172 aaKnown RBP6.25□□□□□ -1.41
SFXN1-205ENST00000506963 LINC01620Q4KN68 170 aa6.25□□□□□ -1.41
SFXN1-205ENST00000506963 Q8IZM0 81 aa6.25□□□□□ -1.41
SFXN1-205ENST00000506963 LINC00526Q96FQ7 95 aa6.25□□□□□ -1.41
SFXN1-205ENST00000506963 CAMK2N2Q96S95 79 aa6.25□□□□□ -1.41
SFXN1-205ENST00000506963 CHTOPQ9Y3Y2 248 aaKnown RBP6.25□□□□□ -1.41
SFXN1-205ENST00000506963 RYR1P21817 5038 aa6.25□□□□□ -1.41
SFXN1-205ENST00000506963 IGLV5-39A0A0G2JS06 123 aa6.24□□□□□ -1.41
SFXN1-205ENST00000506963 C11orf86A6NJI1 115 aa6.24□□□□□ -1.41
SFXN1-205ENST00000506963 H3BRM9 83 aa6.24□□□□□ -1.41
SFXN1-205ENST00000506963 J3QL48 77 aa6.24□□□□□ -1.41
SFXN1-205ENST00000506963 NDUFA1O15239 70 aa6.24□□□□□ -1.41
SFXN1-205ENST00000506963 ZNF22P17026 224 aaPredicted RBP6.24□□□□□ -1.41
SFXN1-205ENST00000506963 ODF1Q14990 250 aa6.24□□□□□ -1.41
SFXN1-205ENST00000506963 Q6ZRU5 148 aa6.24□□□□□ -1.41
SFXN1-205ENST00000506963 FAM30AQ9NZY2 134 aa6.24□□□□□ -1.41
SFXN1-205ENST00000506963 CXCL5P42830 114 aa6.23□□□□□ -1.41
SFXN1-205ENST00000506963 TRBV30A0A0K0K1B3 111 aa6.22□□□□□ -1.41
SFXN1-205ENST00000506963 PRSS2P07478 247 aa6.22□□□□□ -1.41
SFXN1-205ENST00000506963 TLX1NBP0CAT3 122 aa6.22□□□□□ -1.41
SFXN1-205ENST00000506963 FABP4P15090 132 aa6.22□□□□□ -1.41
SFXN1-205ENST00000506963 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms