RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 FOXI1Q12951 378 aa3.74□□□□□ -1.81
USP46-206ENST00000506707 BIRC6Q9NR09 4857 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 ATP6V1G1O75348 118 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 PRSS1P07477 247 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 NPSP0C0P6 89 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 S100A1P23297 94 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 XCL1P47992 114 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 SS18Q15532 418 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 ZC2HC1BQ5TFG8 222 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 CD164L2Q6UWJ8 174 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 LINC00173Q6ZV60 143 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 FA2HQ7L5A8 372 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 ERASQ7Z444 233 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 NTN5Q8WTR8 489 aaPredicted RBP3.73□□□□□ -1.81
USP46-206ENST00000506707 TMEM141Q96I45 108 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 AMELXQ99217 191 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 AP5S1Q9NUS5 200 aa3.73□□□□□ -1.81
USP46-206ENST00000506707 LRP1BQ9NZR2 4599 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 DNAH5Q8TE73 4624 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.72□□□□□ -1.81
USP46-206ENST00000506707 IGHV3OR16-9A0A0B4J2B5 98 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 C16orf90A8MZG2 172 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 SLPIP03973 132 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 RAB5BP61020 215 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 COX6A2Q02221 97 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 PMCHL1Q16048 86 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 C15orf56Q8N910 161 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 SCGB3A1Q96QR1 104 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 TIMM17AQ99595 171 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 KRTAP3-1Q9BYR8 98 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 VCX2Q9H322 139 aa3.72□□□□□ -1.81
USP46-206ENST00000506707 IGLV5-52A0A0A0MRZ9 124 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 LINC01549A6NIU2 74 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 IFITM10A6NMD0 228 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 NUPR1O60356 82 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 GCSHP23434 173 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 UBE2D1P51668 147 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 KRTAP10-1P60331 282 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 C14orf177Q52M58 125 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 PDZD11Q5EBL8 140 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 LINC00242Q5T6M2 205 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 TEX43Q6ZNM6 134 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 FAM19A3Q7Z5A8 133 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 C5orf38Q86SI9 138 aa3.71□□□□□ -1.82
USP46-206ENST00000506707 CHCHD1Q96BP2 118 aaKnown RBP3.71□□□□□ -1.82
USP46-206ENST00000506707 KIAA1109Q2LD37 5005 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 GVQW2A0A096LPI5 108 aaPredicted RBP3.7□□□□□ -1.82
USP46-206ENST00000506707 hDV102S1A0JD36 115 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 COX7A2LO14548 114 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 HBDP02042 147 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 LINC01620Q4KN68 170 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 PAPPA-AS1Q5QFB9 102 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 CFAP161Q6P656 301 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 Q6ZN92 141 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 BAGE3Q86Y29 109 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 FAM19A2Q8N3H0 131 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 CST9LQ9H4G1 147 aa3.7□□□□□ -1.82
USP46-206ENST00000506707 A0A087WZ39 114 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 IGHV1-58A0A0C4DH39 117 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 A0A0J9YXV3 536 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST1H2BKO60814 126 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 SERF1AO75920 110 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST1H2BJP06899 126 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 MALP21145 153 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST1H2BOP23527 126 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST1H2BBP33778 126 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST1H2BDP58876 126 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 CNBPP62633 177 aaKnown RBP3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST1H2BCP62807 126 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST2H2BEQ16778 126 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 HIGD2BQ4VC39 106 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.69□□□□□ -1.82
USP46-206ENST00000506707 SDIM1Q6ZPB5 146 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 C9orf163Q8N9P6 203 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST1H2BHQ93079 126 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 LINC00526Q96FQ7 95 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST1H2BNQ99877 126 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 HIST1H2BMQ99879 126 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 C2orf88Q9BSF0 95 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 FAM30AQ9NZY2 134 aa3.69□□□□□ -1.82
USP46-206ENST00000506707 IGHV3-64A0A075B6Q5 118 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 TINCRA0A1B0GVN0 87 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 HSBP1O75506 76 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 CDK2AP2O75956 126 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 ATP5LO75964 103 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 XGP55808 180 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 HERVK_113P63121 156 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 SEC11AP67812 179 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 PMVKQ15126 192 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 Q6ZSA8 131 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 LINC01561Q8N1V8 128 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 Q8N1X5 172 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 CDKN2A-AS1Q9UH64 79 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 DNAH8Q96JB1 4490 aa3.68□□□□□ -1.82
USP46-206ENST00000506707 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
USP46-206ENST00000506707 IGLV4-69A0A075B6H9 119 aa3.67□□□□□ -1.82
USP46-206ENST00000506707 IGLV5-45A0A087WSX0 123 aa3.67□□□□□ -1.82
USP46-206ENST00000506707 ZNF561-AS1K7EIQ3 104 aa3.67□□□□□ -1.82
USP46-206ENST00000506707 APOMO95445 188 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms