RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ATP5EP2Q5VTU8 51 aa11.43□□□□□ -0.58
SCLT1-208ENST00000506368 H3BUX3 64 aa11.42□□□□□ -0.58
SCLT1-208ENST00000506368 EDN2P20800 178 aa11.42□□□□□ -0.58
SCLT1-208ENST00000506368 RS1O15537 224 aa11.42□□□□□ -0.58
SCLT1-208ENST00000506368 TRAV25A0A0B4J276 109 aa11.41□□□□□ -0.58
SCLT1-208ENST00000506368 LY6EQ16553 131 aa11.41□□□□□ -0.58
SCLT1-208ENST00000506368 RBMY1A1P0DJD3 496 aaKnown RBP11.4□□□□□ -0.58
SCLT1-208ENST00000506368 RBMY1CP0DJD4 496 aa11.4□□□□□ -0.58
SCLT1-208ENST00000506368 RBMY1FQ15415 496 aaKnown RBP11.4□□□□□ -0.58
SCLT1-208ENST00000506368 ZANQ9Y493 2812 aa11.4□□□□□ -0.58
SCLT1-208ENST00000506368 BLCAPP62952 87 aa11.4□□□□□ -0.58
SCLT1-208ENST00000506368 ITPR3Q14573 2671 aa11.39□□□□□ -0.59
SCLT1-208ENST00000506368 F5H768 121 aa11.39□□□□□ -0.59
SCLT1-208ENST00000506368 BRD3OSQ6XYD6 125 aa11.39□□□□□ -0.59
SCLT1-208ENST00000506368 Q6ZSN1 163 aa11.39□□□□□ -0.59
SCLT1-208ENST00000506368 KRTAP1-3Q8IUG1 177 aa11.39□□□□□ -0.59
SCLT1-208ENST00000506368 TRAV13-1A0A0B4J241 112 aa11.39□□□□□ -0.59
SCLT1-208ENST00000506368 TRBV10-1A0A0K0K1A3 114 aa11.39□□□□□ -0.59
SCLT1-208ENST00000506368 USP17L23D6RBM5 183 aa11.39□□□□□ -0.59
SCLT1-208ENST00000506368 NDUFC2O95298 119 aa11.39□□□□□ -0.59
SCLT1-208ENST00000506368 MED13LQ71F56 2210 aa11.38□□□□□ -0.59
SCLT1-208ENST00000506368 Q9HAA7 133 aa11.38□□□□□ -0.59
SCLT1-208ENST00000506368 A0A0U1RRA0 63 aa11.37□□□□□ -0.59
SCLT1-208ENST00000506368 KNCNA6PVL3 124 aa11.37□□□□□ -0.59
SCLT1-208ENST00000506368 SYNJ2BPP57105 145 aa11.37□□□□□ -0.59
SCLT1-208ENST00000506368 WFDC11Q8NEX6 87 aa11.37□□□□□ -0.59
SCLT1-208ENST00000506368 SND1-IT1Q9HBX3 110 aa11.37□□□□□ -0.59
SCLT1-208ENST00000506368 IGHV4-30-2A0A087WSY4 118 aa11.36□□□□□ -0.59
SCLT1-208ENST00000506368 C14orf132Q9NPU4 83 aa11.36□□□□□ -0.59
SCLT1-208ENST00000506368 LINC00846Q9NV44 126 aa11.36□□□□□ -0.59
SCLT1-208ENST00000506368 IGHV3-38A0A0C4DH36 116 aa11.36□□□□□ -0.59
SCLT1-208ENST00000506368 C11orf72Q8NBR9 251 aa11.36□□□□□ -0.59
SCLT1-208ENST00000506368 MAPK1IP1LQ8NDC0 245 aa11.36□□□□□ -0.59
SCLT1-208ENST00000506368 FLNAP21333 2647 aaKnown RBP11.35□□□□□ -0.59
SCLT1-208ENST00000506368 TRBV10-3A0A0K0K1G6 114 aa11.35□□□□□ -0.59
SCLT1-208ENST00000506368 LINC01561Q8N1V8 128 aa11.35□□□□□ -0.59
SCLT1-208ENST00000506368 CDC42SE2Q9NRR3 84 aa11.35□□□□□ -0.59
SCLT1-208ENST00000506368 BCE1O60756 84 aa11.34□□□□□ -0.59
SCLT1-208ENST00000506368 HTN1P15515 57 aa11.34□□□□□ -0.59
SCLT1-208ENST00000506368 RPL36AP83881 106 aaKnown RBP11.34□□□□□ -0.59
SCLT1-208ENST00000506368 LINC00337Q8N6G1 96 aa11.34□□□□□ -0.59
SCLT1-208ENST00000506368 RPL36ALQ969Q0 106 aaKnown RBP11.34□□□□□ -0.59
SCLT1-208ENST00000506368 Q96MF0 132 aa11.34□□□□□ -0.59
SCLT1-208ENST00000506368 NACAE9PAV3 2078 aa11.34□□□□□ -0.59
SCLT1-208ENST00000506368 IGKV3D-7A0A0C4DH55 119 aa11.34□□□□□ -0.59
SCLT1-208ENST00000506368 RBMY1BA6NDE4 496 aaKnown RBP11.34□□□□□ -0.59
SCLT1-208ENST00000506368 RBMY1EA6NEQ0 496 aaKnown RBP11.34□□□□□ -0.59
SCLT1-208ENST00000506368 JMJD7-PLA2G4BH0Y9G9 81 aa11.34□□□□□ -0.59
SCLT1-208ENST00000506368 RBMY1DP0C7P1 496 aaKnown RBP11.34□□□□□ -0.59
SCLT1-208ENST00000506368 SMIM11BQ8TCY0 68 aa11.34□□□□□ -0.59
SCLT1-208ENST00000506368 C10orf105Q8TEF2 133 aa11.34□□□□□ -0.59
SCLT1-208ENST00000506368 Q9UF83 564 aa11.34□□□□□ -0.59
SCLT1-208ENST00000506368 CR1P17927 2039 aa11.33□□□□□ -0.6
SCLT1-208ENST00000506368 CCKP06307 115 aa11.33□□□□□ -0.6
SCLT1-208ENST00000506368 IGHV4-38-2P0DP08 117 aa11.33□□□□□ -0.6
SCLT1-208ENST00000506368 ABCA2Q9BZC7 2435 aa11.33□□□□□ -0.6
SCLT1-208ENST00000506368 ACANP16112 2415 aa11.33□□□□□ -0.6
SCLT1-208ENST00000506368 IGKV2-28A0A075B6P5 120 aa11.32□□□□□ -0.6
SCLT1-208ENST00000506368 A0A087WYN8 130 aa11.32□□□□□ -0.6
SCLT1-208ENST00000506368 IGKV2D-28P01615 120 aa11.32□□□□□ -0.6
SCLT1-208ENST00000506368 ORMDL1Q9P0S3 153 aa11.32□□□□□ -0.6
SCLT1-208ENST00000506368 CREBBPQ92793 2442 aa11.32□□□□□ -0.6
SCLT1-208ENST00000506368 MIR7-3HGQ8N6C7 128 aa11.32□□□□□ -0.6
SCLT1-208ENST00000506368 MRAPQ8TCY5 172 aa11.32□□□□□ -0.6
SCLT1-208ENST00000506368 COX7B2Q8TF08 81 aa11.32□□□□□ -0.6
SCLT1-208ENST00000506368 IBA57-AS1B1ANH7 110 aa11.31□□□□□ -0.6
SCLT1-208ENST00000506368 INSP01308 110 aa11.31□□□□□ -0.6
SCLT1-208ENST00000506368 CYSTM1Q9H1C7 97 aa11.31□□□□□ -0.6
SCLT1-208ENST00000506368 MAST4O15021 2626 aa11.31□□□□□ -0.6
SCLT1-208ENST00000506368 IGHV4-61A0A0C4DH41 118 aa11.31□□□□□ -0.6
SCLT1-208ENST00000506368 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-208ENST00000506368 DEFB131AP59861 70 aa11.31□□□□□ -0.6
SCLT1-208ENST00000506368 KIR2DL5BQ8NHK3 375 aa11.3□□□□□ -0.6
SCLT1-208ENST00000506368 LYPD5Q6UWN5 251 aa11.29□□□□□ -0.6
SCLT1-208ENST00000506368 UBE2E2Q96LR5 201 aa11.29□□□□□ -0.6
SCLT1-208ENST00000506368 LINC00167Q96N53 147 aa11.29□□□□□ -0.6
SCLT1-208ENST00000506368 A0A096LNT2 108 aa11.28□□□□□ -0.6
SCLT1-208ENST00000506368 K7EQD1 137 aa11.28□□□□□ -0.6
SCLT1-208ENST00000506368 LECT2O14960 151 aa11.28□□□□□ -0.6
SCLT1-208ENST00000506368 LY6G6DO95868 133 aa11.28□□□□□ -0.6
SCLT1-208ENST00000506368 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
SCLT1-208ENST00000506368 ZFHX3Q15911 3703 aa11.28□□□□□ -0.6
SCLT1-208ENST00000506368 UBE2L6O14933 153 aa11.28□□□□□ -0.6
SCLT1-208ENST00000506368 DSCR8Q96T75 97 aa11.28□□□□□ -0.6
SCLT1-208ENST00000506368 Q5XG85 94 aa11.27□□□□□ -0.61
SCLT1-208ENST00000506368 CSPG4Q6UVK1 2322 aa11.26□□□□□ -0.61
SCLT1-208ENST00000506368 A0A087WVE0 104 aa11.26□□□□□ -0.61
SCLT1-208ENST00000506368 TLN2Q9Y4G6 2542 aa11.26□□□□□ -0.61
SCLT1-208ENST00000506368 CCL18P55774 89 aa11.26□□□□□ -0.61
SCLT1-208ENST00000506368 LINC00158P58513 81 aa11.26□□□□□ -0.61
SCLT1-208ENST00000506368 DSCR9P59020 149 aa11.26□□□□□ -0.61
SCLT1-208ENST00000506368 IL17DQ8TAD2 202 aa11.26□□□□□ -0.61
SCLT1-208ENST00000506368 TMEM243Q9BU79 118 aa11.26□□□□□ -0.61
SCLT1-208ENST00000506368 GHRHP01286 108 aa11.25□□□□□ -0.61
SCLT1-208ENST00000506368 C9orf129Q5T035 196 aaKnown RBP11.25□□□□□ -0.61
SCLT1-208ENST00000506368 A0A1W2PRX2 142 aa11.24□□□□□ -0.61
SCLT1-208ENST00000506368 TMEM256-PLSCR3K7ERE1 68 aa11.24□□□□□ -0.61
SCLT1-208ENST00000506368 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
SCLT1-208ENST00000506368 TRBV6-4A0A1B0GX49 114 aa11.24□□□□□ -0.61
SCLT1-208ENST00000506368 NCR3O14931 201 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms