RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 DAZ4Q86SG3 579 aaKnown RBP12.05□□□□□ -0.48
LIN54-204ENST00000505397 DAZ3Q9NR90 486 aaKnown RBP12.05□□□□□ -0.48
LIN54-204ENST00000505397 LST1O00453 97 aa12.04□□□□□ -0.48
LIN54-204ENST00000505397 RPL36AP83881 106 aaKnown RBP12.04□□□□□ -0.48
LIN54-204ENST00000505397 DAND5Q8N907 189 aa12.04□□□□□ -0.48
LIN54-204ENST00000505397 RPL36ALQ969Q0 106 aaKnown RBP12.04□□□□□ -0.48
LIN54-204ENST00000505397 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
LIN54-204ENST00000505397 Q6ZTI0 123 aa12.04□□□□□ -0.48
LIN54-204ENST00000505397 TEX49A0A1B0GTD5 131 aa12.03□□□□□ -0.48
LIN54-204ENST00000505397 SMIM1B2RUZ4 78 aa12.03□□□□□ -0.48
LIN54-204ENST00000505397 H3BT86 120 aa12.03□□□□□ -0.48
LIN54-204ENST00000505397 CIRBPQ14011 172 aaKnown RBP12.03□□□□□ -0.48
LIN54-204ENST00000505397 CITED1Q99966 193 aa12.03□□□□□ -0.48
LIN54-204ENST00000505397 WFDC10AQ9H1F0 79 aa12.03□□□□□ -0.48
LIN54-204ENST00000505397 Q9H8V8 135 aa12.03□□□□□ -0.48
LIN54-204ENST00000505397 LINC00308Q8TCZ7 52 aa12.03□□□□□ -0.48
LIN54-204ENST00000505397 C2orf82Q6UX34 121 aa12.02□□□□□ -0.49
LIN54-204ENST00000505397 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.49
LIN54-204ENST00000505397 CLEC2BQ92478 149 aa12.02□□□□□ -0.49
LIN54-204ENST00000505397 F5H768 121 aa12.01□□□□□ -0.49
LIN54-204ENST00000505397 UBE2WQ96B02 151 aa12.01□□□□□ -0.49
LIN54-204ENST00000505397 ZNF625Q96I27 306 aaPredicted RBP12.01□□□□□ -0.49
LIN54-204ENST00000505397 C19orf73Q9NVV2 129 aa12.01□□□□□ -0.49
LIN54-204ENST00000505397 GIG44P09565 113 aaPredicted RBP12.01□□□□□ -0.49
LIN54-204ENST00000505397 RPL35AP18077 110 aaKnown RBP12.01□□□□□ -0.49
LIN54-204ENST00000505397 C9orf66Q5T8R8 295 aa12□□□□□ -0.49
LIN54-204ENST00000505397 NOTCH3Q9UM47 2321 aa11.99□□□□□ -0.49
LIN54-204ENST00000505397 PLAC8L1A1L4L8 177 aa11.99□□□□□ -0.49
LIN54-204ENST00000505397 TRAV13-1A0A0B4J241 112 aa11.98□□□□□ -0.49
LIN54-204ENST00000505397 DEFB121Q5J5C9 76 aa11.98□□□□□ -0.49
LIN54-204ENST00000505397 SOSTDC1Q6X4U4 206 aa11.98□□□□□ -0.49
LIN54-204ENST00000505397 PPDPFQ9H3Y8 114 aa11.98□□□□□ -0.49
LIN54-204ENST00000505397 GAGE12JA6NER3 117 aa11.98□□□□□ -0.49
LIN54-204ENST00000505397 GAGE4Q13068 117 aa11.98□□□□□ -0.49
LIN54-204ENST00000505397 GAGE5Q13069 117 aa11.98□□□□□ -0.49
LIN54-204ENST00000505397 NOP10Q9NPE3 64 aaKnown RBP11.97□□□□□ -0.49
LIN54-204ENST00000505397 ATRQ13535 2644 aa11.97□□□□□ -0.49
LIN54-204ENST00000505397 TRAV8-4A0A0B4J246 113 aa11.97□□□□□ -0.49
LIN54-204ENST00000505397 COPS9Q8WXC6 57 aa11.97□□□□□ -0.49
LIN54-204ENST00000505397 SHISA2Q6UWI4 295 aa11.96□□□□□ -0.49
LIN54-204ENST00000505397 TEP1Q99973 2627 aaKnown RBP11.96□□□□□ -0.49
LIN54-204ENST00000505397 HERV-K104P63124 156 aa11.95□□□□□ -0.5
LIN54-204ENST00000505397 TENM1Q9UKZ4 2725 aa11.95□□□□□ -0.5
LIN54-204ENST00000505397 C16orf74Q96GX8 76 aa11.95□□□□□ -0.5
LIN54-204ENST00000505397 PRIMA1Q86XR5 153 aa11.95□□□□□ -0.5
LIN54-204ENST00000505397 TMEM243Q9BU79 118 aa11.95□□□□□ -0.5
LIN54-204ENST00000505397 COX7A2LO14548 114 aa11.94□□□□□ -0.5
LIN54-204ENST00000505397 OVOL2Q9BRP0 275 aa11.94□□□□□ -0.5
LIN54-204ENST00000505397 TRBV6-4A0A1B0GX49 114 aa11.93□□□□□ -0.5
LIN54-204ENST00000505397 A0A0U1RRA0 63 aa11.93□□□□□ -0.5
LIN54-204ENST00000505397 SNCGO76070 127 aa11.93□□□□□ -0.5
LIN54-204ENST00000505397 CSNK1G2-AS1Q8NCQ2 148 aa11.93□□□□□ -0.5
LIN54-204ENST00000505397 SPATA3Q8NHX4 192 aa11.93□□□□□ -0.5
LIN54-204ENST00000505397 FAM240AA0A1B0GVK7 77 aa11.92□□□□□ -0.5
LIN54-204ENST00000505397 Q6Q795 121 aa11.92□□□□□ -0.5
LIN54-204ENST00000505397 TRAV26-1A0A087WT03 109 aa11.92□□□□□ -0.5
LIN54-204ENST00000505397 UBE2L6O14933 153 aa11.92□□□□□ -0.5
LIN54-204ENST00000505397 MEIG1Q5JSS6 88 aa11.92□□□□□ -0.5
LIN54-204ENST00000505397 VWFP04275 2813 aa11.91□□□□□ -0.5
LIN54-204ENST00000505397 LOC100131303A0A0U1RQF7 123 aa11.9□□□□□ -0.5
LIN54-204ENST00000505397 GAGE7O76087 117 aa11.9□□□□□ -0.5
LIN54-204ENST00000505397 GAGE12FP0CL80 117 aa11.9□□□□□ -0.5
LIN54-204ENST00000505397 GAGE12GP0CL81 117 aa11.9□□□□□ -0.5
LIN54-204ENST00000505397 GAGE12IP0CL82 117 aa11.9□□□□□ -0.5
LIN54-204ENST00000505397 GAGE2BQ13066 116 aa11.9□□□□□ -0.5
LIN54-204ENST00000505397 GAGE2EQ4V326 116 aa11.9□□□□□ -0.5
LIN54-204ENST00000505397 GAGE2DQ9UEU5 116 aa11.9□□□□□ -0.5
LIN54-204ENST00000505397 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.5
LIN54-204ENST00000505397 MRPL23Q16540 153 aaKnown RBP11.9□□□□□ -0.5
LIN54-204ENST00000505397 TRGV2A0A075B6R0 118 aa11.89□□□□□ -0.51
LIN54-204ENST00000505397 C15orf53Q8NAA6 179 aa11.89□□□□□ -0.51
LIN54-204ENST00000505397 ANAPC13Q9BS18 74 aa11.88□□□□□ -0.51
LIN54-204ENST00000505397 NHLRC4P0CG21 123 aaPredicted RBP11.88□□□□□ -0.51
LIN54-204ENST00000505397 TRACP01848 142 aa11.87□□□□□ -0.51
LIN54-204ENST00000505397 FHL2Q14192 279 aa11.87□□□□□ -0.51
LIN54-204ENST00000505397 COX7B2Q8TF08 81 aa11.86□□□□□ -0.51
LIN54-204ENST00000505397 NDUFV3P56181 108 aaKnown RBP11.85□□□□□ -0.51
LIN54-204ENST00000505397 KRTAP24-1Q3LI83 254 aa11.85□□□□□ -0.51
LIN54-204ENST00000505397 TRBV6-8A0A0A6YYG3 113 aa11.85□□□□□ -0.51
LIN54-204ENST00000505397 TRGV4A0A0C4DH28 118 aa11.85□□□□□ -0.51
LIN54-204ENST00000505397 FAM222AQ5U5X8 452 aa11.85□□□□□ -0.51
LIN54-204ENST00000505397 WFDC9Q8NEX5 89 aa11.85□□□□□ -0.51
LIN54-204ENST00000505397 GAGE6Q13070 117 aa11.84□□□□□ -0.51
LIN54-204ENST00000505397 IGLV4-60A0A075B6I1 120 aa11.84□□□□□ -0.51
LIN54-204ENST00000505397 IGHV3OR16-9A0A0B4J2B5 98 aa11.84□□□□□ -0.51
LIN54-204ENST00000505397 RPL28P46779 137 aaKnown RBP11.83□□□□□ -0.52
LIN54-204ENST00000505397 TRAV13-2A0A0B4J235 113 aa11.82□□□□□ -0.52
LIN54-204ENST00000505397 FAM218AQ96MZ4 157 aa11.82□□□□□ -0.52
LIN54-204ENST00000505397 C22orf24Q9Y442 160 aa11.82□□□□□ -0.52
LIN54-204ENST00000505397 MIR7-3HGQ8N6C7 128 aa11.82□□□□□ -0.52
LIN54-204ENST00000505397 IGKV2-28A0A075B6P5 120 aa11.81□□□□□ -0.52
LIN54-204ENST00000505397 IGKV2D-28P01615 120 aa11.81□□□□□ -0.52
LIN54-204ENST00000505397 TTC32Q5I0X7 151 aa11.81□□□□□ -0.52
LIN54-204ENST00000505397 C3orf56Q8N813 242 aa11.81□□□□□ -0.52
LIN54-204ENST00000505397 ACYP1P07311 99 aa11.8□□□□□ -0.52
LIN54-204ENST00000505397 APOC4P55056 127 aa11.8□□□□□ -0.52
LIN54-204ENST00000505397 LINC00337Q8N6G1 96 aa11.8□□□□□ -0.52
LIN54-204ENST00000505397 A0A087WZ39 114 aa11.8□□□□□ -0.52
LIN54-204ENST00000505397 WIPF1O43516 503 aa11.79□□□□□ -0.52
LIN54-204ENST00000505397 KIR2DL5BQ8NHK3 375 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms