RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SPATA45Q537H7 98 aa7.02□□□□□ -1.29
TPM3-217ENST00000504663 LINC01556Q5JQF7 62 aa7.02□□□□□ -1.29
TPM3-217ENST00000504663 TMEM101Q96IK0 257 aa7.02□□□□□ -1.29
TPM3-217ENST00000504663 DNAH17Q9UFH2 4485 aa7.02□□□□□ -1.29
TPM3-217ENST00000504663 TENM2Q9NT68 2774 aa7.02□□□□□ -1.29
TPM3-217ENST00000504663 TRAV8-6A0A0B4J262 113 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 LINC00959A0A1B0GUT2 108 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 TMEM223A0PJW6 202 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 TSPEAR-AS2P59090 65 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 KRTAP26-1Q6PEX3 210 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 CLPSL2Q6UWE3 100 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 ENHOQ6UWT2 76 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 C2orf88Q9BSF0 95 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 PLA2G2DQ9UNK4 145 aa7.01□□□□□ -1.29
TPM3-217ENST00000504663 TRAV13-1A0A0B4J241 112 aa7□□□□□ -1.29
TPM3-217ENST00000504663 IGHV3-30P01768 117 aa7□□□□□ -1.29
TPM3-217ENST00000504663 IGHV3-33P01772 117 aa7□□□□□ -1.29
TPM3-217ENST00000504663 IGHV3-30-3P0DP02 117 aa7□□□□□ -1.29
TPM3-217ENST00000504663 IGHV3-30-5P0DP03 117 aa7□□□□□ -1.29
TPM3-217ENST00000504663 PKIAP61925 76 aa7□□□□□ -1.29
TPM3-217ENST00000504663 PRO1933Q9H354 126 aa7□□□□□ -1.29
TPM3-217ENST00000504663 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
TPM3-217ENST00000504663 IGHV3OR16-9A0A0B4J2B5 98 aa6.99□□□□□ -1.29
TPM3-217ENST00000504663 E9PLD3 99 aa6.99□□□□□ -1.29
TPM3-217ENST00000504663 TCTAP57738 103 aa6.99□□□□□ -1.29
TPM3-217ENST00000504663 REG3AQ06141 175 aa6.99□□□□□ -1.29
TPM3-217ENST00000504663 KRTAP1-5Q9BYS1 174 aa6.99□□□□□ -1.29
TPM3-217ENST00000504663 TTTY13Q9BZ97 58 aa6.99□□□□□ -1.29
TPM3-217ENST00000504663 CDKN2A-AS1Q9UH64 79 aa6.99□□□□□ -1.29
TPM3-217ENST00000504663 KLK12Q9UKR0 248 aa6.99□□□□□ -1.29
TPM3-217ENST00000504663 IGLV5-39A0A0G2JS06 123 aa6.98□□□□□ -1.29
TPM3-217ENST00000504663 SMIM1B2RUZ4 78 aa6.98□□□□□ -1.29
TPM3-217ENST00000504663 ANGP03950 147 aaKnown RBP6.98□□□□□ -1.29
TPM3-217ENST00000504663 S100A12P80511 92 aa6.98□□□□□ -1.29
TPM3-217ENST00000504663 ZFAND6Q6FIF0 208 aa6.98□□□□□ -1.29
TPM3-217ENST00000504663 PCP2Q8IVA1 136 aa6.98□□□□□ -1.29
TPM3-217ENST00000504663 MUC7Q8TAX7 377 aa6.98□□□□□ -1.29
TPM3-217ENST00000504663 TRAV8-3A0A0A6YYJ7 113 aa6.97□□□□□ -1.29
TPM3-217ENST00000504663 IGKV3OR2-268A0A0C4DH90 116 aa6.97□□□□□ -1.29
TPM3-217ENST00000504663 B5MCH6 92 aa6.97□□□□□ -1.29
TPM3-217ENST00000504663 CCL25O15444 150 aa6.97□□□□□ -1.29
TPM3-217ENST00000504663 CCL18P55774 89 aa6.97□□□□□ -1.29
TPM3-217ENST00000504663 HERVK_113P63121 156 aa6.97□□□□□ -1.29
TPM3-217ENST00000504663 FOXI1Q12951 378 aa6.97□□□□□ -1.29
TPM3-217ENST00000504663 TMEM170BQ5T4T1 132 aa6.97□□□□□ -1.29
TPM3-217ENST00000504663 KLK5Q9Y337 293 aaPredicted RBP6.97□□□□□ -1.29
TPM3-217ENST00000504663 SIVA1O15304 175 aa6.96□□□□□ -1.3
TPM3-217ENST00000504663 SPINK8P0C7L1 97 aa6.96□□□□□ -1.3
TPM3-217ENST00000504663 COX8AP10176 69 aa6.96□□□□□ -1.3
TPM3-217ENST00000504663 PCP4P48539 62 aa6.96□□□□□ -1.3
TPM3-217ENST00000504663 BOD1L2Q8IYS8 172 aa6.96□□□□□ -1.3
TPM3-217ENST00000504663 LINC00469Q8N7U9 141 aa6.96□□□□□ -1.3
TPM3-217ENST00000504663 MAPKAPK5-AS1Q8N8E1 139 aa6.96□□□□□ -1.3
TPM3-217ENST00000504663 CHCHD10Q8WYQ3 142 aaPredicted RBP6.96□□□□□ -1.3
TPM3-217ENST00000504663 C14orf144Q96I85 54 aa6.96□□□□□ -1.3
TPM3-217ENST00000504663 WWC2-AS2Q96NR7 200 aa6.96□□□□□ -1.3
TPM3-217ENST00000504663 DNAH11Q96DT5 4516 aa6.95□□□□□ -1.3
TPM3-217ENST00000504663 IGLV10-54A0A075B6I4 117 aa6.95□□□□□ -1.3
TPM3-217ENST00000504663 A0A087WZ39 114 aa6.95□□□□□ -1.3
TPM3-217ENST00000504663 IGHV1-58A0A0C4DH39 117 aa6.95□□□□□ -1.3
TPM3-217ENST00000504663 IBA57-AS1B1ANH7 110 aa6.95□□□□□ -1.3
TPM3-217ENST00000504663 LEPROTO15243 131 aa6.95□□□□□ -1.3
TPM3-217ENST00000504663 C2orf91Q6ZV80 131 aa6.95□□□□□ -1.3
TPM3-217ENST00000504663 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
TPM3-217ENST00000504663 HYDINQ4G0P3 5121 aa6.95□□□□□ -1.3
TPM3-217ENST00000504663 FRAS1Q86XX4 4008 aa6.94□□□□□ -1.3
TPM3-217ENST00000504663 IGHV3-64A0A075B6Q5 118 aa6.94□□□□□ -1.3
TPM3-217ENST00000504663 DLEU1O43261 78 aa6.94□□□□□ -1.3
TPM3-217ENST00000504663 XCL1P47992 114 aa6.94□□□□□ -1.3
TPM3-217ENST00000504663 NMUP48645 174 aa6.94□□□□□ -1.3
TPM3-217ENST00000504663 SEC11AP67812 179 aa6.94□□□□□ -1.3
TPM3-217ENST00000504663 CD164L2Q6UWJ8 174 aa6.94□□□□□ -1.3
TPM3-217ENST00000504663 UBE2WQ96B02 151 aa6.94□□□□□ -1.3
TPM3-217ENST00000504663 Q9H8V8 135 aa6.94□□□□□ -1.3
TPM3-217ENST00000504663 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
TPM3-217ENST00000504663 HSBP1L1C9JCN9 74 aa6.93□□□□□ -1.3
TPM3-217ENST00000504663 SS18Q15532 418 aa6.93□□□□□ -1.3
TPM3-217ENST00000504663 MIAQ16674 131 aa6.93□□□□□ -1.3
TPM3-217ENST00000504663 C5orf38Q86SI9 138 aa6.93□□□□□ -1.3
TPM3-217ENST00000504663 LINC01561Q8N1V8 128 aa6.93□□□□□ -1.3
TPM3-217ENST00000504663 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
TPM3-217ENST00000504663 J3QQQ9 107 aa6.92□□□□□ -1.3
TPM3-217ENST00000504663 HERVK_113P61574 105 aa6.92□□□□□ -1.3
TPM3-217ENST00000504663 CASC10Q5T4H9 136 aa6.92□□□□□ -1.3
TPM3-217ENST00000504663 C10orf126Q8N4M7 172 aa6.92□□□□□ -1.3
TPM3-217ENST00000504663 PLEKHB2Q96CS7 222 aa6.92□□□□□ -1.3
TPM3-217ENST00000504663 MIEN1Q9BRT3 115 aa6.92□□□□□ -1.3
TPM3-217ENST00000504663 UQCR10Q9UDW1 63 aa6.92□□□□□ -1.3
TPM3-217ENST00000504663 TRAV8-4A0A0B4J246 113 aa6.91□□□□□ -1.3
TPM3-217ENST00000504663 A4D1N5 150 aa6.91□□□□□ -1.3
TPM3-217ENST00000504663 TSTD3H0UI37 97 aa6.91□□□□□ -1.3
TPM3-217ENST00000504663 H3BRM9 83 aa6.91□□□□□ -1.3
TPM3-217ENST00000504663 CRPP02741 224 aa6.91□□□□□ -1.3
TPM3-217ENST00000504663 DDTP30046 118 aa6.91□□□□□ -1.3
TPM3-217ENST00000504663 KIAA0087Q14695 138 aa6.91□□□□□ -1.3
TPM3-217ENST00000504663 SLC25A34Q6PIV7 304 aa6.91□□□□□ -1.3
TPM3-217ENST00000504663 ZNF625Q96I27 306 aaPredicted RBP6.91□□□□□ -1.3
TPM3-217ENST00000504663 MYMXA0A1B0GTQ4 84 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms