RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 IGLV1-40P01703 118 aa12.58□□□□□ -0.4
HMGXB3-201ENST00000502717 LINC00242Q5T6M2 205 aa12.58□□□□□ -0.4
HMGXB3-201ENST00000502717 ATP5EP56381 51 aaPredicted RBP12.58□□□□□ -0.4
HMGXB3-201ENST00000502717 Q6YL49 198 aa12.57□□□□□ -0.4
HMGXB3-201ENST00000502717 PRO0255Q9UI72 69 aa12.57□□□□□ -0.4
HMGXB3-201ENST00000502717 TLN2Q9Y4G6 2542 aa12.57□□□□□ -0.4
HMGXB3-201ENST00000502717 DEFB114Q30KQ6 69 aa12.56□□□□□ -0.4
HMGXB3-201ENST00000502717 FAM19A5Q7Z5A7 132 aaPredicted RBP12.56□□□□□ -0.4
HMGXB3-201ENST00000502717 TRBV6-4A0A1B0GX49 114 aa12.56□□□□□ -0.4
HMGXB3-201ENST00000502717 HILS1P60008 231 aa12.56□□□□□ -0.4
HMGXB3-201ENST00000502717 KIF25-AS1Q9Y6Z4 181 aa12.56□□□□□ -0.4
HMGXB3-201ENST00000502717 TRBV6-8A0A0A6YYG3 113 aa12.55□□□□□ -0.4
HMGXB3-201ENST00000502717 MP68P56378 58 aa12.55□□□□□ -0.4
HMGXB3-201ENST00000502717 C11orf45Q8TAV5 145 aa12.55□□□□□ -0.4
HMGXB3-201ENST00000502717 C6orf99Q4VX62 202 aa12.55□□□□□ -0.4
HMGXB3-201ENST00000502717 IGHV4-28A0A0C4DH34 117 aa12.54□□□□□ -0.4
HMGXB3-201ENST00000502717 SMIM1B2RUZ4 78 aa12.54□□□□□ -0.4
HMGXB3-201ENST00000502717 CHCHD7Q9BUK0 85 aa12.54□□□□□ -0.4
HMGXB3-201ENST00000502717 ETDCA0A1B0GVM5 59 aa12.54□□□□□ -0.4
HMGXB3-201ENST00000502717 CCKP06307 115 aa12.54□□□□□ -0.4
HMGXB3-201ENST00000502717 CDC42SE2Q9NRR3 84 aa12.54□□□□□ -0.4
HMGXB3-201ENST00000502717 BPY2O14599 106 aa12.53□□□□□ -0.4
HMGXB3-201ENST00000502717 BPTFQ12830 3046 aa12.53□□□□□ -0.4
HMGXB3-201ENST00000502717 CDSNQ15517 529 aa12.53□□□□□ -0.4
HMGXB3-201ENST00000502717 RAI1Q7Z5J4 1906 aaPredicted RBP12.53□□□□□ -0.4
HMGXB3-201ENST00000502717 WFDC9Q8NEX5 89 aa12.52□□□□□ -0.41
HMGXB3-201ENST00000502717 CSDC2Q9Y534 153 aaKnown RBP12.51□□□□□ -0.41
HMGXB3-201ENST00000502717 HRCT1Q6UXD1 115 aa12.5□□□□□ -0.41
HMGXB3-201ENST00000502717 PPDPFQ9H3Y8 114 aa12.5□□□□□ -0.41
HMGXB3-201ENST00000502717 USP9XQ93008 2570 aaPredicted RBP12.5□□□□□ -0.41
HMGXB3-201ENST00000502717 C10orf99Q6UWK7 81 aa12.5□□□□□ -0.41
HMGXB3-201ENST00000502717 BRI3O95415 125 aa12.5□□□□□ -0.41
HMGXB3-201ENST00000502717 LINC00269Q8N2A0 174 aa12.5□□□□□ -0.41
HMGXB3-201ENST00000502717 A0A087WVE0 104 aa12.5□□□□□ -0.41
HMGXB3-201ENST00000502717 MPLKIPQ8TAP9 179 aa12.49□□□□□ -0.41
HMGXB3-201ENST00000502717 CHCHD10Q8WYQ3 142 aaPredicted RBP12.49□□□□□ -0.41
HMGXB3-201ENST00000502717 SMIM26A0A096LP01 95 aa12.49□□□□□ -0.41
HMGXB3-201ENST00000502717 REG3AQ06141 175 aa12.49□□□□□ -0.41
HMGXB3-201ENST00000502717 COX6A2Q02221 97 aa12.48□□□□□ -0.41
HMGXB3-201ENST00000502717 KLK12Q9UKR0 248 aa12.48□□□□□ -0.41
HMGXB3-201ENST00000502717 SNURFQ9Y675 71 aa12.48□□□□□ -0.41
HMGXB3-201ENST00000502717 PTPRBP23467 1997 aa12.48□□□□□ -0.41
HMGXB3-201ENST00000502717 TRAV7A0A075B6U4 112 aa12.48□□□□□ -0.41
HMGXB3-201ENST00000502717 SCXQ7RTU7 201 aa12.48□□□□□ -0.41
HMGXB3-201ENST00000502717 ESM1Q9NQ30 184 aa12.48□□□□□ -0.41
HMGXB3-201ENST00000502717 SERP1Q9Y6X1 66 aa12.48□□□□□ -0.41
HMGXB3-201ENST00000502717 LINC00315P59091 139 aa12.47□□□□□ -0.41
HMGXB3-201ENST00000502717 LOC107984640A0A0U1RRK4 108 aa12.47□□□□□ -0.41
HMGXB3-201ENST00000502717 PRM2P04554 102 aa12.47□□□□□ -0.41
HMGXB3-201ENST00000502717 C14orf177Q52M58 125 aa12.47□□□□□ -0.41
HMGXB3-201ENST00000502717 PCNTO95613 3336 aa12.47□□□□□ -0.41
HMGXB3-201ENST00000502717 A0A087WYN8 130 aa12.45□□□□□ -0.42
HMGXB3-201ENST00000502717 LINC00959A0A1B0GUT2 108 aa12.45□□□□□ -0.42
HMGXB3-201ENST00000502717 FN1P02751 2386 aaKnown RBP12.44□□□□□ -0.42
HMGXB3-201ENST00000502717 Q6ZQY7 126 aa12.44□□□□□ -0.42
HMGXB3-201ENST00000502717 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.43□□□□□ -0.42
HMGXB3-201ENST00000502717 EDN2P20800 178 aa12.43□□□□□ -0.42
HMGXB3-201ENST00000502717 DEFB4AO15263 64 aa12.43□□□□□ -0.42
HMGXB3-201ENST00000502717 A0A0U1RQV1 116 aa12.43□□□□□ -0.42
HMGXB3-201ENST00000502717 CRYGAP11844 174 aa12.43□□□□□ -0.42
HMGXB3-201ENST00000502717 COX17Q14061 63 aa12.43□□□□□ -0.42
HMGXB3-201ENST00000502717 MTORP42345 2549 aa12.43□□□□□ -0.42
HMGXB3-201ENST00000502717 C4orf48Q5BLP8 95 aa12.42□□□□□ -0.42
HMGXB3-201ENST00000502717 V9GYY9 64 aa12.42□□□□□ -0.42
HMGXB3-201ENST00000502717 Q8IZM0 81 aa12.42□□□□□ -0.42
HMGXB3-201ENST00000502717 USP9YO00507 2555 aaPredicted RBP12.41□□□□□ -0.42
HMGXB3-201ENST00000502717 CD164L2Q6UWJ8 174 aa12.41□□□□□ -0.42
HMGXB3-201ENST00000502717 Q8N814 137 aa12.41□□□□□ -0.42
HMGXB3-201ENST00000502717 NTM-AS1Q6ZSK4 140 aa12.41□□□□□ -0.42
HMGXB3-201ENST00000502717 LINC00846Q9NV44 126 aa12.41□□□□□ -0.42
HMGXB3-201ENST00000502717 EPG5Q9HCE0 2579 aa12.4□□□□□ -0.42
HMGXB3-201ENST00000502717 PRB2P02812 416 aaPredicted RBP12.4□□□□□ -0.42
HMGXB3-201ENST00000502717 RPS28P62857 69 aaKnown RBP12.4□□□□□ -0.42
HMGXB3-201ENST00000502717 FAM19A4Q96LR4 140 aa12.4□□□□□ -0.42
HMGXB3-201ENST00000502717 FAM19A3Q7Z5A8 133 aa12.39□□□□□ -0.43
HMGXB3-201ENST00000502717 LINC01006Q8NI28 216 aa12.39□□□□□ -0.43
HMGXB3-201ENST00000502717 CHD7Q9P2D1 2997 aa12.39□□□□□ -0.43
HMGXB3-201ENST00000502717 DEFB131BA0A096LNP1 70 aa12.38□□□□□ -0.43
HMGXB3-201ENST00000502717 MUC7Q8TAX7 377 aa12.38□□□□□ -0.43
HMGXB3-201ENST00000502717 LOC100131303A0A0U1RQF7 123 aa12.38□□□□□ -0.43
HMGXB3-201ENST00000502717 POLQO75417 2590 aa12.38□□□□□ -0.43
HMGXB3-201ENST00000502717 HTTP42858 3142 aa12.38□□□□□ -0.43
HMGXB3-201ENST00000502717 A0A087WZ39 114 aa12.38□□□□□ -0.43
HMGXB3-201ENST00000502717 MIFP14174 115 aa12.38□□□□□ -0.43
HMGXB3-201ENST00000502717 BEAN1Q3B7T3 259 aa12.37□□□□□ -0.43
HMGXB3-201ENST00000502717 ZNF702PQ9H963 129 aa12.37□□□□□ -0.43
HMGXB3-201ENST00000502717 IGLV5-39A0A0G2JS06 123 aa12.37□□□□□ -0.43
HMGXB3-201ENST00000502717 LYRM9A8MSI8 78 aa12.37□□□□□ -0.43
HMGXB3-201ENST00000502717 FLNBO75369 2602 aaKnown RBP12.36□□□□□ -0.43
HMGXB3-201ENST00000502717 FHL3Q13643 280 aa12.36□□□□□ -0.43
HMGXB3-201ENST00000502717 A0A1W2PPR1 153 aa12.36□□□□□ -0.43
HMGXB3-201ENST00000502717 Q6ZSN1 163 aa12.36□□□□□ -0.43
HMGXB3-201ENST00000502717 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-201ENST00000502717 XAGE1AQ9HD64 81 aa12.35□□□□□ -0.43
HMGXB3-201ENST00000502717 TRAV10A0A0B4J240 114 aa12.34□□□□□ -0.43
HMGXB3-201ENST00000502717 NDUFB1O75438 58 aa12.33□□□□□ -0.44
HMGXB3-201ENST00000502717 LINC00337Q8N6G1 96 aa12.33□□□□□ -0.44
HMGXB3-201ENST00000502717 C1orf195Q5TG92 126 aa12.33□□□□□ -0.44
HMGXB3-201ENST00000502717 TRBV10-3A0A0K0K1G6 114 aa12.32□□□□□ -0.44
HMGXB3-201ENST00000502717 SETD2Q9BYW2 2564 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms