RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 CLPSL2Q6UWE3 100 aa5.59□□□□□ -1.51
PDZRN3-212ENST00000498048 FAM19A3Q7Z5A8 133 aa5.59□□□□□ -1.51
PDZRN3-212ENST00000498048 MAPKAPK5-AS1Q8N8E1 139 aa5.59□□□□□ -1.51
PDZRN3-212ENST00000498048 NBEAL1Q6ZS30 2694 aa5.59□□□□□ -1.52
PDZRN3-212ENST00000498048 DEFB131BA0A096LNP1 70 aa5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 TRAV8-3A0A0A6YYJ7 113 aa5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 IGHV1-58A0A0C4DH39 117 aa5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 TMEM262E9PQX1 116 aa5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 H3BNG1 76 aa5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 IGHV3-30-3P0DP02 117 aa5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 GCSHP23434 173 aa5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 RBX1P62877 108 aa5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 LINC00242Q5T6M2 205 aa5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 CDKN2A-AS1Q9UH64 79 aa5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 HUWE1Q7Z6Z7 4374 aaKnown RBP5.58□□□□□ -1.52
PDZRN3-212ENST00000498048 TRAV10A0A0B4J240 114 aa5.57□□□□□ -1.52
PDZRN3-212ENST00000498048 A0A1B0GUV1 79 aa5.57□□□□□ -1.52
PDZRN3-212ENST00000498048 SMIM1B2RUZ4 78 aa5.57□□□□□ -1.52
PDZRN3-212ENST00000498048 ORAOV1Q8WV07 137 aa5.57□□□□□ -1.52
PDZRN3-212ENST00000498048 HIST1H4GQ99525 98 aa5.57□□□□□ -1.52
PDZRN3-212ENST00000498048 MGAM2Q2M2H8 2515 aa5.57□□□□□ -1.52
PDZRN3-212ENST00000498048 A0A1B0GV90 55 aa5.56□□□□□ -1.52
PDZRN3-212ENST00000498048 A6NDN8 102 aa5.56□□□□□ -1.52
PDZRN3-212ENST00000498048 ANGP03950 147 aaKnown RBP5.56□□□□□ -1.52
PDZRN3-212ENST00000498048 COX6A2Q02221 97 aa5.56□□□□□ -1.52
PDZRN3-212ENST00000498048 TAL2Q16559 108 aa5.56□□□□□ -1.52
PDZRN3-212ENST00000498048 ZFAND6Q6FIF0 208 aa5.56□□□□□ -1.52
PDZRN3-212ENST00000498048 TMEM238C9JI98 176 aa5.55□□□□□ -1.52
PDZRN3-212ENST00000498048 FXYD2P54710 66 aa5.55□□□□□ -1.52
PDZRN3-212ENST00000498048 SS18Q15532 418 aa5.55□□□□□ -1.52
PDZRN3-212ENST00000498048 CEND1Q8N111 149 aa5.55□□□□□ -1.52
PDZRN3-212ENST00000498048 Q8N3U1 123 aa5.55□□□□□ -1.52
PDZRN3-212ENST00000498048 B9D2Q9BPU9 175 aa5.55□□□□□ -1.52
PDZRN3-212ENST00000498048 SPANXB1Q9NS25 103 aaPredicted RBP5.55□□□□□ -1.52
PDZRN3-212ENST00000498048 NDUFA12Q9UI09 145 aa5.55□□□□□ -1.52
PDZRN3-212ENST00000498048 IGLV5-39A0A0G2JS06 123 aa5.54□□□□□ -1.52
PDZRN3-212ENST00000498048 LINC00959A0A1B0GUT2 108 aa5.54□□□□□ -1.52
PDZRN3-212ENST00000498048 NDUFA1O15239 70 aa5.54□□□□□ -1.52
PDZRN3-212ENST00000498048 CCL25O15444 150 aa5.54□□□□□ -1.52
PDZRN3-212ENST00000498048 CRPP02741 224 aa5.54□□□□□ -1.52
PDZRN3-212ENST00000498048 PTTG1IPP53801 180 aa5.54□□□□□ -1.52
PDZRN3-212ENST00000498048 C10orf126Q8N4M7 172 aa5.54□□□□□ -1.52
PDZRN3-212ENST00000498048 C15orf53Q8NAA6 179 aa5.54□□□□□ -1.52
PDZRN3-212ENST00000498048 A0A0J9YXY3 114 aa5.53□□□□□ -1.52
PDZRN3-212ENST00000498048 XCL1P47992 114 aa5.53□□□□□ -1.52
PDZRN3-212ENST00000498048 REG3AQ06141 175 aa5.53□□□□□ -1.52
PDZRN3-212ENST00000498048 SRSF9Q13242 221 aaKnown RBP eCLIP5.53□□□□□ -1.52
PDZRN3-212ENST00000498048 LYPD5Q6UWN5 251 aa5.53□□□□□ -1.52
PDZRN3-212ENST00000498048 WFDC10BQ8IUB3 73 aa5.53□□□□□ -1.52
PDZRN3-212ENST00000498048 LINC00269Q8N2A0 174 aa5.53□□□□□ -1.52
PDZRN3-212ENST00000498048 NHP2Q9NX24 153 aaKnown RBP5.53□□□□□ -1.52
PDZRN3-212ENST00000498048 DNAH9Q9NYC9 4486 aa5.52□□□□□ -1.53
PDZRN3-212ENST00000498048 IGHV3-30P01768 117 aa5.52□□□□□ -1.53
PDZRN3-212ENST00000498048 IGHV3-33P01772 117 aa5.52□□□□□ -1.53
PDZRN3-212ENST00000498048 IGHV3-30-5P0DP03 117 aa5.52□□□□□ -1.53
PDZRN3-212ENST00000498048 COX7B2Q8TF08 81 aa5.52□□□□□ -1.53
PDZRN3-212ENST00000498048 TM2D2Q9BX73 214 aa5.52□□□□□ -1.53
PDZRN3-212ENST00000498048 Q9H8V8 135 aa5.52□□□□□ -1.53
PDZRN3-212ENST00000498048 TOMM7Q9P0U1 55 aa5.52□□□□□ -1.53
PDZRN3-212ENST00000498048 IGLV10-54A0A075B6I4 117 aa5.51□□□□□ -1.53
PDZRN3-212ENST00000498048 A0A087WZ39 114 aa5.51□□□□□ -1.53
PDZRN3-212ENST00000498048 IGHV3OR16-9A0A0B4J2B5 98 aa5.51□□□□□ -1.53
PDZRN3-212ENST00000498048 K7EP13 123 aa5.51□□□□□ -1.53
PDZRN3-212ENST00000498048 K7ERJ3 54 aa5.51□□□□□ -1.53
PDZRN3-212ENST00000498048 TAX1BP3O14907 124 aa5.51□□□□□ -1.53
PDZRN3-212ENST00000498048 C5orf38Q86SI9 138 aa5.51□□□□□ -1.53
PDZRN3-212ENST00000498048 CHCHD10Q8WYQ3 142 aaPredicted RBP5.51□□□□□ -1.53
PDZRN3-212ENST00000498048 KLK12Q9UKR0 248 aa5.51□□□□□ -1.53
PDZRN3-212ENST00000498048 COX11Q9Y6N1 276 aa5.51□□□□□ -1.53
PDZRN3-212ENST00000498048 COX7A2LO14548 114 aa5.5□□□□□ -1.53
PDZRN3-212ENST00000498048 TIMM17BO60830 172 aa5.5□□□□□ -1.53
PDZRN3-212ENST00000498048 HERV-K104P63124 156 aa5.5□□□□□ -1.53
PDZRN3-212ENST00000498048 MIAQ16674 131 aa5.5□□□□□ -1.53
PDZRN3-212ENST00000498048 MEIG1Q5JSS6 88 aa5.5□□□□□ -1.53
PDZRN3-212ENST00000498048 CD164L2Q6UWJ8 174 aa5.5□□□□□ -1.53
PDZRN3-212ENST00000498048 Q6ZVH6 145 aa5.5□□□□□ -1.53
PDZRN3-212ENST00000498048 SPANXDQ9BXN6 97 aa5.5□□□□□ -1.53
PDZRN3-212ENST00000498048 SPANXCQ9NY87 97 aa5.5□□□□□ -1.53
PDZRN3-212ENST00000498048 PRSS2P07478 247 aa5.49□□□□□ -1.53
PDZRN3-212ENST00000498048 SMIM13P0DJ93 91 aa5.49□□□□□ -1.53
PDZRN3-212ENST00000498048 ESRGQ1W209 222 aa5.49□□□□□ -1.53
PDZRN3-212ENST00000498048 SFTA2Q6UW10 78 aa5.49□□□□□ -1.53
PDZRN3-212ENST00000498048 LINC01561Q8N1V8 128 aa5.49□□□□□ -1.53
PDZRN3-212ENST00000498048 RAB37Q96AX2 223 aa5.49□□□□□ -1.53
PDZRN3-212ENST00000498048 UBE2WQ96B02 151 aa5.49□□□□□ -1.53
PDZRN3-212ENST00000498048 ZNF625Q96I27 306 aaPredicted RBP5.49□□□□□ -1.53
PDZRN3-212ENST00000498048 LITAFQ99732 161 aa5.49□□□□□ -1.53
PDZRN3-212ENST00000498048 PRR34Q9NV39 138 aa5.49□□□□□ -1.53
PDZRN3-212ENST00000498048 GAGE12HA6NDE8 117 aa5.48□□□□□ -1.53
PDZRN3-212ENST00000498048 IGLL5B9A064 214 aa5.48□□□□□ -1.53
PDZRN3-212ENST00000498048 MALP21145 153 aa5.48□□□□□ -1.53
PDZRN3-212ENST00000498048 RPL24P83731 157 aaKnown RBP5.48□□□□□ -1.53
PDZRN3-212ENST00000498048 CIRBPQ14011 172 aaKnown RBP5.48□□□□□ -1.53
PDZRN3-212ENST00000498048 KRTAP21-3Q3LHN1 58 aa5.48□□□□□ -1.53
PDZRN3-212ENST00000498048 LINC01556Q5JQF7 62 aa5.48□□□□□ -1.53
PDZRN3-212ENST00000498048 CFAP161Q6P656 301 aa5.48□□□□□ -1.53
PDZRN3-212ENST00000498048 Q8IZM0 81 aa5.48□□□□□ -1.53
PDZRN3-212ENST00000498048 COL7A1Q02388 2944 aa5.47□□□□□ -1.53
PDZRN3-212ENST00000498048 TRAV8-4A0A0B4J246 113 aa5.47□□□□□ -1.53
PDZRN3-212ENST00000498048 A0A1B0GWB2 263 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms