RNA–Protein interactions for RNA: ENST00000497305.1

SHOC2-207, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 1 (best)

Gene SHOC2, Length 325 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-207ENST00000497305 TRAV13-2A0A0B4J235 113 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 SNCGO76070 127 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 SFT2D2O95562 160 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 MGPP08493 103 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 RPS28P62857 69 aaKnown RBP-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 BTG2P78543 158 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 PPP1R2P3Q6NXS1 205 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 CTAGE3PQ8IX95 158 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 OR8I2Q8N0Y5 310 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 CFAP53Q96M91 514 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 SPRR4Q96PI1 79 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 HOPXQ9BPY8 73 aaPredicted RBP-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 MRPL34Q9BQ48 92 aaKnown RBP-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 CDKN2A-AS1Q9UH64 79 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 RANBP2P49792 3224 aaKnown RBP-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 C1orf167Q5SNV9 1468 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 CCDC141Q6ZP82 1450 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 IFT140Q96RY7 1462 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 NLRP1Q9C000 1473 aa-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 DYNC1H1Q14204 4646 aaKnown RBP-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.88□□□□□ -2.55
SHOC2-207ENST00000497305 PPIP5K1Q6PFW1 1433 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 PRG4Q92954 1404 aaPredicted RBP-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 GCN1Q92616 2671 aaKnown RBP-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 ALKQ9UM73 1620 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 LOC100130705A0A1B0GUX0 176 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 HMGN4O00479 90 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 IGLC1P0CG04 106 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 FGF7P21781 194 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 REEP5Q00765 189 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 Q6ZUT4 128 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 TAC4Q86UU9 113 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 MNS1Q8NEH6 495 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 TSLPQ969D9 159 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 SPTSSAQ969W0 71 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 DYNLRB1Q9NP97 96 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 HIGD1BQ9P298 99 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 TMEM2Q9UHN6 1383 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 TET3O43151 1660 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 MYOM1P52179 1685 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 QRICH2Q9H0J4 1663 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 ACACAQ13085 2346 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 ABCA13Q86UQ4 5058 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 NCOA3Q9Y6Q9 1424 aa-0.89□□□□□ -2.55
SHOC2-207ENST00000497305 CSMD1Q96PZ7 3565 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 REV3LO60673 3130 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 SCN7AQ01118 1682 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 COL6A5A8TX70 2615 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 PLEKHH2Q8IVE3 1493 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 MBD5Q9P267 1494 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 KNL1Q8NG31 2342 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 ANKRD30AQ9BXX3 1397 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 FAM236AA0A1B0GUQ0 79 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 FAM236BA0A1B0GV22 79 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 PFDN1O60925 122 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 NDUFB6O95139 128 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 MT1GP13640 62 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 CMPK1P30085 196 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 B2MP61769 119 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 NCS1P62166 190 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 SEC11AP67812 179 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 RGS21Q2M5E4 152 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 SAMD13Q5VXD3 122 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 TCTE3Q8IZS6 198 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 TMEM35BQ8NCS4 154 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 OR9Q1Q8NGQ5 310 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 MAGOHBQ96A72 148 aaKnown RBP-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 FAM167A-AS1Q96KT0 104 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 MGST2Q99735 147 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 PSMG3Q9BT73 122 aaPredicted RBP-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 SAR1AQ9NR31 198 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 FAIMQ9NVQ4 179 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 SPEF2Q9C093 1822 aa-0.9□□□□□ -2.55
SHOC2-207ENST00000497305 SRCAPQ6ZRS2 3230 aa-0.91□□□□□ -2.55
SHOC2-207ENST00000497305 PKD1L2Q7Z442 2459 aa-0.91□□□□□ -2.55
SHOC2-207ENST00000497305 LRRK2Q5S007 2527 aa-0.91□□□□□ -2.55
SHOC2-207ENST00000497305 C4AP0C0L4 1744 aa-0.91□□□□□ -2.55
SHOC2-207ENST00000497305 C4BP0C0L5 1744 aa-0.91□□□□□ -2.55
SHOC2-207ENST00000497305 NUP188Q5SRE5 1749 aa-0.91□□□□□ -2.55
SHOC2-207ENST00000497305 A0A1B0GU69 56 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 CCL22O00626 93 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 TNFSF15O95150 251 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 SNCAP37840 140 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 MRPS25P82663 173 aaKnown RBP-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 MRPL54Q6P161 138 aaKnown RBP-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 FAM223AQ8IWN6 122 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 TMEM191AQ9H0A3 160 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 PRO1933Q9H354 126 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 HIGD1AQ9Y241 93 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 RIF1Q5UIP0 2472 aaKnown RBP-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 MTORP42345 2549 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 MYH13Q9UKX3 1938 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 ITPR1Q14643 2758 aa-0.91□□□□□ -2.56
SHOC2-207ENST00000497305 PSME4Q14997 1843 aa-0.92□□□□□ -2.56
SHOC2-207ENST00000497305 TRANK1O15050 2925 aa-0.92□□□□□ -2.56
SHOC2-207ENST00000497305 NBEAQ8NFP9 2946 aa-0.92□□□□□ -2.56
SHOC2-207ENST00000497305 C5orf42Q9H799 3197 aa-0.92□□□□□ -2.56
SHOC2-207ENST00000497305 ZNF518AQ6AHZ1 1483 aa-0.92□□□□□ -2.56
SHOC2-207ENST00000497305 LRRC37AA6NMS7 1700 aa-0.92□□□□□ -2.56
SHOC2-207ENST00000497305 KIAA1551Q9HCM1 1747 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms